RNA–Protein interactions for RNA: ENST00000390438.2

TRAV8-4-201, Transcript of T cell receptor alpha variable 8-4, humanhuman

APPRIS P1 BASIC

Gene TRAV8-4, Length 469 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4-201ENST00000390438 NISCHQ9Y2I1 1504 aa15.15■□□□□ 0.02
TRAV8-4-201ENST00000390438 CCDC180Q9P1Z9 1646 aa13.55□□□□□ -0.24
TRAV8-4-201ENST00000390438 ABCC9O60706 1549 aa13.22□□□□□ -0.29
TRAV8-4-201ENST00000390438 RB1CC1Q8TDY2 1594 aa12.79□□□□□ -0.36
TRAV8-4-201ENST00000390438 NACADO15069 1562 aa12.77□□□□□ -0.37
TRAV8-4-201ENST00000390438 MYO15BQ96JP2 1530 aa12.7□□□□□ -0.38
TRAV8-4-201ENST00000390438 DCAF8L2P0C7V8 631 aa12.64□□□□□ -0.39
TRAV8-4-201ENST00000390438 ZCCHC6Q5VYS8 1495 aaKnown RBP12.61□□□□□ -0.39
TRAV8-4-201ENST00000390438 DCAF1Q9Y4B6 1507 aa12.6□□□□□ -0.39
TRAV8-4-201ENST00000390438 UNC13AQ9UPW8 1703 aa12.37□□□□□ -0.43
TRAV8-4-201ENST00000390438 SHROOM4Q9ULL8 1493 aa12.36□□□□□ -0.43
TRAV8-4-201ENST00000390438 PABPN1Q86U42 306 aaKnown RBP eCLIP12.3□□□□□ -0.44
TRAV8-4-201ENST00000390438 BICRAQ9NZM4 1560 aa12.28□□□□□ -0.44
TRAV8-4-201ENST00000390438 SCRIBQ14160 1630 aa12.27□□□□□ -0.44
TRAV8-4-201ENST00000390438 DNAJC5BQ9UF47 199 aa12.09□□□□□ -0.47
TRAV8-4-201ENST00000390438 EIF4G1Q04637 1599 aaKnown RBP12.03□□□□□ -0.48
TRAV8-4-201ENST00000390438 CC2D2AQ9P2K1 1620 aa11.97□□□□□ -0.49
TRAV8-4-201ENST00000390438 CECR2Q9BXF3 1484 aa11.94□□□□□ -0.5
TRAV8-4-201ENST00000390438 AEBP2Q6ZN18 517 aaPredicted RBP11.92□□□□□ -0.5
TRAV8-4-201ENST00000390438 BAZ1AQ9NRL2 1556 aaPredicted RBP11.79□□□□□ -0.52
TRAV8-4-201ENST00000390438 SMARCA2P51531 1590 aa11.77□□□□□ -0.53
TRAV8-4-201ENST00000390438 SMARCA4P51532 1647 aa11.76□□□□□ -0.53
TRAV8-4-201ENST00000390438 NCAPD3P42695 1498 aa11.74□□□□□ -0.53
TRAV8-4-201ENST00000390438 ATAD2BQ9ULI0 1458 aa11.72□□□□□ -0.53
TRAV8-4-201ENST00000390438 HMGXB3Q12766 1538 aa11.71□□□□□ -0.53
TRAV8-4-201ENST00000390438 PEG3Q9GZU2 1588 aa11.68□□□□□ -0.54
TRAV8-4-201ENST00000390438 BAZ1BQ9UIG0 1483 aaKnown RBP11.65□□□□□ -0.54
TRAV8-4-201ENST00000390438 MROH2BQ7Z745 1585 aa11.62□□□□□ -0.55
TRAV8-4-201ENST00000390438 ERCC6Q03468 1493 aa11.49□□□□□ -0.57
TRAV8-4-201ENST00000390438 RSF1Q96T23 1441 aaPredicted RBP11.48□□□□□ -0.57
TRAV8-4-201ENST00000390438 WIZO95785 1651 aa11.48□□□□□ -0.57
TRAV8-4-201ENST00000390438 LAMC3Q9Y6N6 1575 aa11.47□□□□□ -0.57
TRAV8-4-201ENST00000390438 TOP2AP11388 1531 aaKnown RBP11.44□□□□□ -0.58
TRAV8-4-201ENST00000390438 PDS5BQ9NTI5 1447 aa11.43□□□□□ -0.58
TRAV8-4-201ENST00000390438 CUX2O14529 1486 aa11.41□□□□□ -0.58
TRAV8-4-201ENST00000390438 CADPSQ9ULU8 1353 aa11.4□□□□□ -0.59
TRAV8-4-201ENST00000390438 NESP48681 1621 aa11.38□□□□□ -0.59
TRAV8-4-201ENST00000390438 CHIC1Q5VXU3 224 aa11.37□□□□□ -0.59
TRAV8-4-201ENST00000390438 CFTRP13569 1480 aa11.31□□□□□ -0.6
TRAV8-4-201ENST00000390438 CEP164Q9UPV0 1460 aa11.29□□□□□ -0.6
TRAV8-4-201ENST00000390438 THOC2Q8NI27 1593 aaKnown RBP11.28□□□□□ -0.6
TRAV8-4-201ENST00000390438 KIF21AQ7Z4S6 1674 aa11.28□□□□□ -0.6
TRAV8-4-201ENST00000390438 MRC2Q9UBG0 1479 aa11.27□□□□□ -0.6
TRAV8-4-201ENST00000390438 FANCD2Q9BXW9 1451 aa11.26□□□□□ -0.61
TRAV8-4-201ENST00000390438 CCDC88BA6NC98 1476 aa11.25□□□□□ -0.61
TRAV8-4-201ENST00000390438 PRDM2Q13029 1718 aa11.23□□□□□ -0.61
TRAV8-4-201ENST00000390438 WDR62O43379 1518 aa11.22□□□□□ -0.61
TRAV8-4-201ENST00000390438 ABCC8Q09428 1581 aa11.16□□□□□ -0.62
TRAV8-4-201ENST00000390438 SUPT5HO00267 1087 aaKnown RBP11.13□□□□□ -0.63
TRAV8-4-201ENST00000390438 URB2Q14146 1524 aaKnown RBP11.1□□□□□ -0.63
TRAV8-4-201ENST00000390438 DNMBPQ6XZF7 1577 aa11.07□□□□□ -0.64
TRAV8-4-201ENST00000390438 TOPBP1Q92547 1522 aa11.06□□□□□ -0.64
TRAV8-4-201ENST00000390438 DNAJC5Q9H3Z4 198 aa11.06□□□□□ -0.64
TRAV8-4-201ENST00000390438 IFT140Q96RY7 1462 aa11.06□□□□□ -0.64
TRAV8-4-201ENST00000390438 WDR97A6NE52 1622 aa10.97□□□□□ -0.65
TRAV8-4-201ENST00000390438 POLA1P09884 1462 aaPredicted RBP10.95□□□□□ -0.66
TRAV8-4-201ENST00000390438 SOGA1O94964 1423 aa10.92□□□□□ -0.66
TRAV8-4-201ENST00000390438 EIF4G3O43432 1585 aaKnown RBP10.92□□□□□ -0.66
TRAV8-4-201ENST00000390438 CUX1P39880 1505 aa10.92□□□□□ -0.66
TRAV8-4-201ENST00000390438 FGD5Q6ZNL6 1462 aa10.92□□□□□ -0.66
TRAV8-4-201ENST00000390438 TARBP1Q13395 1621 aaKnown RBP10.91□□□□□ -0.66
TRAV8-4-201ENST00000390438 ZNF608Q9ULD9 1512 aaPredicted RBP10.9□□□□□ -0.66
TRAV8-4-201ENST00000390438 OSCARQ8IYS5 282 aa10.89□□□□□ -0.67
TRAV8-4-201ENST00000390438 WRNQ14191 1432 aaPredicted RBP eCLIP10.88□□□□□ -0.67
TRAV8-4-201ENST00000390438 RAD54L2Q9Y4B4 1467 aa10.86□□□□□ -0.67
TRAV8-4-201ENST00000390438 TOP2BQ02880 1626 aa10.85□□□□□ -0.67
TRAV8-4-201ENST00000390438 AQRO60306 1485 aaKnown RBP eCLIP10.85□□□□□ -0.67
TRAV8-4-201ENST00000390438 ABCA10Q8WWZ4 1543 aa10.84□□□□□ -0.67
TRAV8-4-201ENST00000390438 BIVM-ERCC5R4GMW8 1640 aa10.84□□□□□ -0.67
TRAV8-4-201ENST00000390438 GRIN2BQ13224 1484 aa10.84□□□□□ -0.67
TRAV8-4-201ENST00000390438 MAGI1Q96QZ7 1491 aaPredicted RBP10.84□□□□□ -0.67
TRAV8-4-201ENST00000390438 TDRD9Q8NDG6 1382 aaKnown RBP10.82□□□□□ -0.68
TRAV8-4-201ENST00000390438 GAPVD1Q14C86 1478 aa10.81□□□□□ -0.68
TRAV8-4-201ENST00000390438 SYNJ1O43426 1573 aa10.79□□□□□ -0.68
TRAV8-4-201ENST00000390438 SNAPC4Q5SXM2 1469 aa10.79□□□□□ -0.68
TRAV8-4-201ENST00000390438 ABCA5Q8WWZ7 1642 aa10.78□□□□□ -0.68
TRAV8-4-201ENST00000390438 FBLN2P98095 1184 aa10.78□□□□□ -0.68
TRAV8-4-201ENST00000390438 SYNJ2O15056 1496 aa10.77□□□□□ -0.69
TRAV8-4-201ENST00000390438 CHMP7Q8WUX9 453 aaPredicted RBP10.77□□□□□ -0.69
TRAV8-4-201ENST00000390438 PBRM1Q86U86 1689 aa10.76□□□□□ -0.69
TRAV8-4-201ENST00000390438 CHD1O14646 1710 aa10.75□□□□□ -0.69
TRAV8-4-201ENST00000390438 ERICH3Q5RHP9 1530 aa10.74□□□□□ -0.69
TRAV8-4-201ENST00000390438 FHAD1B1AJZ9 1412 aa10.71□□□□□ -0.69
TRAV8-4-201ENST00000390438 ADAMTS12P58397 1594 aa10.69□□□□□ -0.7
TRAV8-4-201ENST00000390438 KIF27Q86VH2 1401 aa10.69□□□□□ -0.7
TRAV8-4-201ENST00000390438 ARHGEF11O15085 1522 aa10.68□□□□□ -0.7
TRAV8-4-201ENST00000390438 GRIN2AQ12879 1464 aa10.68□□□□□ -0.7
TRAV8-4-201ENST00000390438 RIMBP3CA6NJZ7 1639 aa10.67□□□□□ -0.7
TRAV8-4-201ENST00000390438 RIMBP3BA6NNM3 1639 aa10.67□□□□□ -0.7
TRAV8-4-201ENST00000390438 RIMBP3Q9UFD9 1639 aa10.67□□□□□ -0.7
TRAV8-4-201ENST00000390438 CLASP1Q7Z460 1538 aa10.67□□□□□ -0.7
TRAV8-4-201ENST00000390438 TRIM41Q8WV44 630 aa10.65□□□□□ -0.7
TRAV8-4-201ENST00000390438 CUL7Q14999 1698 aa10.64□□□□□ -0.71
TRAV8-4-201ENST00000390438 NUP160Q12769 1436 aa10.62□□□□□ -0.71
TRAV8-4-201ENST00000390438 IGF1RP08069 1367 aa10.58□□□□□ -0.72
TRAV8-4-201ENST00000390438 CEP170Q5SW79 1584 aa10.57□□□□□ -0.72
TRAV8-4-201ENST00000390438 ARAP1Q96P48 1450 aa10.57□□□□□ -0.72
TRAV8-4-201ENST00000390438 CYB5RLQ6IPT4 315 aa10.57□□□□□ -0.72
TRAV8-4-201ENST00000390438 CARMIL1Q5VZK9 1371 aa10.55□□□□□ -0.72
TRAV8-4-201ENST00000390438 SHROOM2Q13796 1616 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms