RNA–Protein interactions for RNA: ENST00000390434.3

TRAV8-2-201, Transcript of T cell receptor alpha variable 8-2, humanhuman

APPRIS P1 BASIC

Gene TRAV8-2, Length 566 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2-201ENST00000390434 NISCHQ9Y2I1 1504 aa26.27■■□□□ 1.8
TRAV8-2-201ENST00000390434 CCDC180Q9P1Z9 1646 aa23.53■■□□□ 1.36
TRAV8-2-201ENST00000390434 ABCC9O60706 1549 aa23.44■■□□□ 1.34
TRAV8-2-201ENST00000390434 RB1CC1Q8TDY2 1594 aa22.43■■□□□ 1.18
TRAV8-2-201ENST00000390434 NACADO15069 1562 aa22.34■■□□□ 1.17
TRAV8-2-201ENST00000390434 MYO15BQ96JP2 1530 aa22.16■■□□□ 1.14
TRAV8-2-201ENST00000390434 DCAF8L2P0C7V8 631 aa22.09■■□□□ 1.13
TRAV8-2-201ENST00000390434 DNAJC5BQ9UF47 199 aa22.02■■□□□ 1.12
TRAV8-2-201ENST00000390434 PABPN1Q86U42 306 aaKnown RBP eCLIP21.85■■□□□ 1.09
TRAV8-2-201ENST00000390434 DCAF1Q9Y4B6 1507 aa21.83■■□□□ 1.09
TRAV8-2-201ENST00000390434 ZCCHC6Q5VYS8 1495 aaKnown RBP21.77■■□□□ 1.07
TRAV8-2-201ENST00000390434 BICRAQ9NZM4 1560 aa21.69■■□□□ 1.06
TRAV8-2-201ENST00000390434 SHROOM4Q9ULL8 1493 aa21.67■■□□□ 1.06
TRAV8-2-201ENST00000390434 UNC13AQ9UPW8 1703 aa21.66■■□□□ 1.06
TRAV8-2-201ENST00000390434 SCRIBQ14160 1630 aa21.29■■□□□ 1
TRAV8-2-201ENST00000390434 CECR2Q9BXF3 1484 aa21.2■□□□□ 0.98
TRAV8-2-201ENST00000390434 EIF4G1Q04637 1599 aaKnown RBP21.2■□□□□ 0.98
TRAV8-2-201ENST00000390434 CC2D2AQ9P2K1 1620 aa21.18■□□□□ 0.98
TRAV8-2-201ENST00000390434 NCAPD3P42695 1498 aa20.68■□□□□ 0.9
TRAV8-2-201ENST00000390434 ATAD2BQ9ULI0 1458 aa20.52■□□□□ 0.88
TRAV8-2-201ENST00000390434 SMARCA2P51531 1590 aa20.5■□□□□ 0.87
TRAV8-2-201ENST00000390434 HMGXB3Q12766 1538 aa20.45■□□□□ 0.86
TRAV8-2-201ENST00000390434 BAZ1AQ9NRL2 1556 aaPredicted RBP20.42■□□□□ 0.86
TRAV8-2-201ENST00000390434 SMARCA4P51532 1647 aa20.42■□□□□ 0.86
TRAV8-2-201ENST00000390434 CUX2O14529 1486 aa20.38■□□□□ 0.85
TRAV8-2-201ENST00000390434 DNAJC5Q9H3Z4 198 aa20.38■□□□□ 0.85
TRAV8-2-201ENST00000390434 PEG3Q9GZU2 1588 aa20.34■□□□□ 0.85
TRAV8-2-201ENST00000390434 ERCC6Q03468 1493 aa20.31■□□□□ 0.84
TRAV8-2-201ENST00000390434 BAZ1BQ9UIG0 1483 aaKnown RBP20.3■□□□□ 0.84
TRAV8-2-201ENST00000390434 MROH2BQ7Z745 1585 aa20.15■□□□□ 0.82
TRAV8-2-201ENST00000390434 LAMC3Q9Y6N6 1575 aa20.12■□□□□ 0.81
TRAV8-2-201ENST00000390434 NESP48681 1621 aa20.11■□□□□ 0.81
TRAV8-2-201ENST00000390434 PDS5BQ9NTI5 1447 aa20.1■□□□□ 0.81
TRAV8-2-201ENST00000390434 CADPSQ9ULU8 1353 aa20.02■□□□□ 0.8
TRAV8-2-201ENST00000390434 AEBP2Q6ZN18 517 aaPredicted RBP19.96■□□□□ 0.79
TRAV8-2-201ENST00000390434 THOC2Q8NI27 1593 aaKnown RBP19.93■□□□□ 0.78
TRAV8-2-201ENST00000390434 RSF1Q96T23 1441 aaPredicted RBP19.84■□□□□ 0.77
TRAV8-2-201ENST00000390434 WIZO95785 1651 aa19.82■□□□□ 0.76
TRAV8-2-201ENST00000390434 MRC2Q9UBG0 1479 aa19.82■□□□□ 0.76
TRAV8-2-201ENST00000390434 CFTRP13569 1480 aa19.78■□□□□ 0.76
TRAV8-2-201ENST00000390434 KIF21AQ7Z4S6 1674 aa19.78■□□□□ 0.76
TRAV8-2-201ENST00000390434 WDR62O43379 1518 aa19.76■□□□□ 0.75
TRAV8-2-201ENST00000390434 CEP164Q9UPV0 1460 aa19.73■□□□□ 0.75
TRAV8-2-201ENST00000390434 FANCD2Q9BXW9 1451 aa19.71■□□□□ 0.75
TRAV8-2-201ENST00000390434 TOP2AP11388 1531 aaKnown RBP19.71■□□□□ 0.75
TRAV8-2-201ENST00000390434 CHIC1Q5VXU3 224 aa19.53■□□□□ 0.72
TRAV8-2-201ENST00000390434 CCDC88BA6NC98 1476 aa19.49■□□□□ 0.71
TRAV8-2-201ENST00000390434 OSCARQ8IYS5 282 aa19.49■□□□□ 0.71
TRAV8-2-201ENST00000390434 URB2Q14146 1524 aaKnown RBP19.49■□□□□ 0.71
TRAV8-2-201ENST00000390434 ABCC8Q09428 1581 aa19.44■□□□□ 0.7
TRAV8-2-201ENST00000390434 IFT140Q96RY7 1462 aa19.39■□□□□ 0.69
TRAV8-2-201ENST00000390434 PRDM2Q13029 1718 aa19.35■□□□□ 0.69
TRAV8-2-201ENST00000390434 TOPBP1Q92547 1522 aa19.31■□□□□ 0.68
TRAV8-2-201ENST00000390434 TRIM41Q8WV44 630 aa19.3■□□□□ 0.68
TRAV8-2-201ENST00000390434 DNMBPQ6XZF7 1577 aa19.25■□□□□ 0.67
TRAV8-2-201ENST00000390434 ZNF608Q9ULD9 1512 aaPredicted RBP19.22■□□□□ 0.67
TRAV8-2-201ENST00000390434 POLA1P09884 1462 aaPredicted RBP19.12■□□□□ 0.65
TRAV8-2-201ENST00000390434 TARBP1Q13395 1621 aaKnown RBP19.11■□□□□ 0.65
TRAV8-2-201ENST00000390434 SOGA1O94964 1423 aa19.09■□□□□ 0.65
TRAV8-2-201ENST00000390434 EIF4G3O43432 1585 aaKnown RBP19.09■□□□□ 0.65
TRAV8-2-201ENST00000390434 AQRO60306 1485 aaKnown RBP eCLIP19.09■□□□□ 0.65
TRAV8-2-201ENST00000390434 WDR97A6NE52 1622 aa19.07■□□□□ 0.64
TRAV8-2-201ENST00000390434 ARHGEF11O15085 1522 aa19.02■□□□□ 0.64
TRAV8-2-201ENST00000390434 RIMBP3CA6NJZ7 1639 aa19■□□□□ 0.63
TRAV8-2-201ENST00000390434 RIMBP3BA6NNM3 1639 aa19■□□□□ 0.63
TRAV8-2-201ENST00000390434 RIMBP3Q9UFD9 1639 aa19■□□□□ 0.63
TRAV8-2-201ENST00000390434 TDRD9Q8NDG6 1382 aaKnown RBP18.99■□□□□ 0.63
TRAV8-2-201ENST00000390434 RAD54L2Q9Y4B4 1467 aa18.98■□□□□ 0.63
TRAV8-2-201ENST00000390434 FGD5Q6ZNL6 1462 aa18.97■□□□□ 0.63
TRAV8-2-201ENST00000390434 FBLN2P98095 1184 aa18.97■□□□□ 0.63
TRAV8-2-201ENST00000390434 MAGI1Q96QZ7 1491 aaPredicted RBP18.96■□□□□ 0.63
TRAV8-2-201ENST00000390434 CUX1P39880 1505 aa18.95■□□□□ 0.62
TRAV8-2-201ENST00000390434 GRIN2BQ13224 1484 aa18.93■□□□□ 0.62
TRAV8-2-201ENST00000390434 CHMP7Q8WUX9 453 aaPredicted RBP18.93■□□□□ 0.62
TRAV8-2-201ENST00000390434 CYB5RLQ6IPT4 315 aa18.92■□□□□ 0.62
TRAV8-2-201ENST00000390434 SNAPC4Q5SXM2 1469 aa18.88■□□□□ 0.61
TRAV8-2-201ENST00000390434 SYNJ2O15056 1496 aa18.87■□□□□ 0.61
TRAV8-2-201ENST00000390434 SUPT5HO00267 1087 aaKnown RBP18.85■□□□□ 0.61
TRAV8-2-201ENST00000390434 CHD1O14646 1710 aa18.85■□□□□ 0.61
TRAV8-2-201ENST00000390434 ABCA10Q8WWZ4 1543 aa18.84■□□□□ 0.61
TRAV8-2-201ENST00000390434 GAPVD1Q14C86 1478 aa18.84■□□□□ 0.61
TRAV8-2-201ENST00000390434 SYNJ1O43426 1573 aa18.82■□□□□ 0.6
TRAV8-2-201ENST00000390434 ARAP1Q96P48 1450 aa18.82■□□□□ 0.6
TRAV8-2-201ENST00000390434 WRNQ14191 1432 aaPredicted RBP eCLIP18.82■□□□□ 0.6
TRAV8-2-201ENST00000390434 CLASP1Q7Z460 1538 aa18.8■□□□□ 0.6
TRAV8-2-201ENST00000390434 ABCA5Q8WWZ7 1642 aa18.71■□□□□ 0.58
TRAV8-2-201ENST00000390434 TRHP20396 242 aaPredicted RBP18.69■□□□□ 0.58
TRAV8-2-201ENST00000390434 TOP2BQ02880 1626 aa18.67■□□□□ 0.58
TRAV8-2-201ENST00000390434 FHAD1B1AJZ9 1412 aa18.65■□□□□ 0.58
TRAV8-2-201ENST00000390434 GRIN2AQ12879 1464 aa18.65■□□□□ 0.58
TRAV8-2-201ENST00000390434 NUP160Q12769 1436 aa18.64■□□□□ 0.57
TRAV8-2-201ENST00000390434 PBRM1Q86U86 1689 aa18.63■□□□□ 0.57
TRAV8-2-201ENST00000390434 BIVM-ERCC5R4GMW8 1640 aa18.63■□□□□ 0.57
TRAV8-2-201ENST00000390434 ERICH3Q5RHP9 1530 aa18.62■□□□□ 0.57
TRAV8-2-201ENST00000390434 ADAMTS12P58397 1594 aa18.56■□□□□ 0.56
TRAV8-2-201ENST00000390434 CEP170Q5SW79 1584 aa18.48■□□□□ 0.55
TRAV8-2-201ENST00000390434 JPH4Q96JJ6 628 aa18.48■□□□□ 0.55
TRAV8-2-201ENST00000390434 SHROOM2Q13796 1616 aa18.46■□□□□ 0.55
TRAV8-2-201ENST00000390434 KIF27Q86VH2 1401 aa18.41■□□□□ 0.54
TRAV8-2-201ENST00000390434 IGF1RP08069 1367 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms