RNA–Protein interactions for RNA: ENST00000390433.1

TRAV12-1-201, Transcript of T cell receptor alpha variable 12-1, humanhuman

APPRIS P1 BASIC

Gene TRAV12-1, Length 340 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1-201ENST00000390433 NISCHQ9Y2I1 1504 aa18.02■□□□□ 0.47
TRAV12-1-201ENST00000390433 ABCC9O60706 1549 aa16.97■□□□□ 0.31
TRAV12-1-201ENST00000390433 DNAJC5BQ9UF47 199 aa16.42■□□□□ 0.22
TRAV12-1-201ENST00000390433 CCDC180Q9P1Z9 1646 aa16.41■□□□□ 0.22
TRAV12-1-201ENST00000390433 RB1CC1Q8TDY2 1594 aa15.9■□□□□ 0.14
TRAV12-1-201ENST00000390433 PABPN1Q86U42 306 aaKnown RBP eCLIP15.74■□□□□ 0.11
TRAV12-1-201ENST00000390433 NACADO15069 1562 aa15.65■□□□□ 0.1
TRAV12-1-201ENST00000390433 UNC13AQ9UPW8 1703 aa15.57■□□□□ 0.08
TRAV12-1-201ENST00000390433 DCAF8L2P0C7V8 631 aa15.54■□□□□ 0.08
TRAV12-1-201ENST00000390433 DNAJC5Q9H3Z4 198 aa15.5■□□□□ 0.07
TRAV12-1-201ENST00000390433 BICRAQ9NZM4 1560 aa15.45■□□□□ 0.06
TRAV12-1-201ENST00000390433 CECR2Q9BXF3 1484 aa15.33■□□□□ 0.05
TRAV12-1-201ENST00000390433 CC2D2AQ9P2K1 1620 aa15.3■□□□□ 0.04
TRAV12-1-201ENST00000390433 MYO15BQ96JP2 1530 aa15.22■□□□□ 0.03
TRAV12-1-201ENST00000390433 SHROOM4Q9ULL8 1493 aa15.14■□□□□ 0.01
TRAV12-1-201ENST00000390433 EIF4G1Q04637 1599 aaKnown RBP15.11■□□□□ 0.01
TRAV12-1-201ENST00000390433 SCRIBQ14160 1630 aa14.93□□□□□ -0.02
TRAV12-1-201ENST00000390433 CUX2O14529 1486 aa14.84□□□□□ -0.03
TRAV12-1-201ENST00000390433 DCAF1Q9Y4B6 1507 aa14.82□□□□□ -0.04
TRAV12-1-201ENST00000390433 ZCCHC6Q5VYS8 1495 aaKnown RBP14.79□□□□□ -0.04
TRAV12-1-201ENST00000390433 ERCC6Q03468 1493 aa14.7□□□□□ -0.06
TRAV12-1-201ENST00000390433 TRIM41Q8WV44 630 aa14.62□□□□□ -0.07
TRAV12-1-201ENST00000390433 NCAPD3P42695 1498 aa14.44□□□□□ -0.1
TRAV12-1-201ENST00000390433 NESP48681 1621 aa14.41□□□□□ -0.1
TRAV12-1-201ENST00000390433 THOC2Q8NI27 1593 aaKnown RBP14.36□□□□□ -0.11
TRAV12-1-201ENST00000390433 ATAD2BQ9ULI0 1458 aa14.32□□□□□ -0.12
TRAV12-1-201ENST00000390433 HMGXB3Q12766 1538 aa14.28□□□□□ -0.12
TRAV12-1-201ENST00000390433 SMARCA2P51531 1590 aa14.26□□□□□ -0.13
TRAV12-1-201ENST00000390433 KIF21AQ7Z4S6 1674 aa14.23□□□□□ -0.13
TRAV12-1-201ENST00000390433 LAMC3Q9Y6N6 1575 aa14.22□□□□□ -0.13
TRAV12-1-201ENST00000390433 SMARCA4P51532 1647 aa14.18□□□□□ -0.14
TRAV12-1-201ENST00000390433 PDS5BQ9NTI5 1447 aa14.17□□□□□ -0.14
TRAV12-1-201ENST00000390433 BAZ1BQ9UIG0 1483 aaKnown RBP14.17□□□□□ -0.14
TRAV12-1-201ENST00000390433 OSCARQ8IYS5 282 aa14.12□□□□□ -0.15
TRAV12-1-201ENST00000390433 BAZ1AQ9NRL2 1556 aaPredicted RBP14.12□□□□□ -0.15
TRAV12-1-201ENST00000390433 MRC2Q9UBG0 1479 aa14.06□□□□□ -0.16
TRAV12-1-201ENST00000390433 WDR62O43379 1518 aa14.04□□□□□ -0.16
TRAV12-1-201ENST00000390433 PEG3Q9GZU2 1588 aa14.02□□□□□ -0.16
TRAV12-1-201ENST00000390433 CADPSQ9ULU8 1353 aa13.99□□□□□ -0.17
TRAV12-1-201ENST00000390433 RIMBP3CA6NJZ7 1639 aa13.97□□□□□ -0.17
TRAV12-1-201ENST00000390433 RIMBP3BA6NNM3 1639 aa13.97□□□□□ -0.17
TRAV12-1-201ENST00000390433 RIMBP3Q9UFD9 1639 aa13.97□□□□□ -0.17
TRAV12-1-201ENST00000390433 CEP164Q9UPV0 1460 aa13.91□□□□□ -0.18
TRAV12-1-201ENST00000390433 AEBP2Q6ZN18 517 aaPredicted RBP13.9□□□□□ -0.18
TRAV12-1-201ENST00000390433 MROH2BQ7Z745 1585 aa13.88□□□□□ -0.19
TRAV12-1-201ENST00000390433 TRHP20396 242 aaPredicted RBP13.88□□□□□ -0.19
TRAV12-1-201ENST00000390433 ARHGEF11O15085 1522 aa13.85□□□□□ -0.19
TRAV12-1-201ENST00000390433 CYB5RLQ6IPT4 315 aa13.84□□□□□ -0.19
TRAV12-1-201ENST00000390433 FANCD2Q9BXW9 1451 aa13.84□□□□□ -0.19
TRAV12-1-201ENST00000390433 URB2Q14146 1524 aaKnown RBP13.74□□□□□ -0.21
TRAV12-1-201ENST00000390433 WIZO95785 1651 aa13.71□□□□□ -0.21
TRAV12-1-201ENST00000390433 CFTRP13569 1480 aa13.7□□□□□ -0.22
TRAV12-1-201ENST00000390433 ZNF608Q9ULD9 1512 aaPredicted RBP13.68□□□□□ -0.22
TRAV12-1-201ENST00000390433 ARAP1Q96P48 1450 aa13.67□□□□□ -0.22
TRAV12-1-201ENST00000390433 IFT140Q96RY7 1462 aa13.64□□□□□ -0.23
TRAV12-1-201ENST00000390433 CHD1O14646 1710 aa13.61□□□□□ -0.23
TRAV12-1-201ENST00000390433 RSF1Q96T23 1441 aaPredicted RBP13.57□□□□□ -0.24
TRAV12-1-201ENST00000390433 FBLN2P98095 1184 aa13.57□□□□□ -0.24
TRAV12-1-201ENST00000390433 EIF4G3O43432 1585 aaKnown RBP13.57□□□□□ -0.24
TRAV12-1-201ENST00000390433 PRDM2Q13029 1718 aa13.56□□□□□ -0.24
TRAV12-1-201ENST00000390433 TOPBP1Q92547 1522 aa13.51□□□□□ -0.25
TRAV12-1-201ENST00000390433 AQRO60306 1485 aaKnown RBP eCLIP13.49□□□□□ -0.25
TRAV12-1-201ENST00000390433 TOP2AP11388 1531 aaKnown RBP13.46□□□□□ -0.25
TRAV12-1-201ENST00000390433 ABCC8Q09428 1581 aa13.45□□□□□ -0.26
TRAV12-1-201ENST00000390433 TARBP1Q13395 1621 aaKnown RBP13.42□□□□□ -0.26
TRAV12-1-201ENST00000390433 DNMBPQ6XZF7 1577 aa13.41□□□□□ -0.26
TRAV12-1-201ENST00000390433 CLASP1Q7Z460 1538 aa13.39□□□□□ -0.27
TRAV12-1-201ENST00000390433 CHMP7Q8WUX9 453 aaPredicted RBP13.37□□□□□ -0.27
TRAV12-1-201ENST00000390433 SYNJ1O43426 1573 aa13.37□□□□□ -0.27
TRAV12-1-201ENST00000390433 ILDR1Q86SU0 546 aaPredicted RBP13.34□□□□□ -0.27
TRAV12-1-201ENST00000390433 CCDC88BA6NC98 1476 aa13.34□□□□□ -0.27
TRAV12-1-201ENST00000390433 POLA1P09884 1462 aaPredicted RBP13.33□□□□□ -0.28
TRAV12-1-201ENST00000390433 SNAPC4Q5SXM2 1469 aa13.33□□□□□ -0.28
TRAV12-1-201ENST00000390433 TDRD9Q8NDG6 1382 aaKnown RBP13.32□□□□□ -0.28
TRAV12-1-201ENST00000390433 GAPVD1Q14C86 1478 aa13.32□□□□□ -0.28
TRAV12-1-201ENST00000390433 RAD54L2Q9Y4B4 1467 aa13.31□□□□□ -0.28
TRAV12-1-201ENST00000390433 SOGA1O94964 1423 aa13.29□□□□□ -0.28
TRAV12-1-201ENST00000390433 MAGI1Q96QZ7 1491 aaPredicted RBP13.27□□□□□ -0.29
TRAV12-1-201ENST00000390433 WDR97A6NE52 1622 aa13.24□□□□□ -0.29
TRAV12-1-201ENST00000390433 SYNJ2O15056 1496 aa13.23□□□□□ -0.29
TRAV12-1-201ENST00000390433 GRIN2BQ13224 1484 aa13.22□□□□□ -0.29
TRAV12-1-201ENST00000390433 KIF13AQ9H1H9 1805 aa13.2□□□□□ -0.3
TRAV12-1-201ENST00000390433 FGD5Q6ZNL6 1462 aa13.17□□□□□ -0.3
TRAV12-1-201ENST00000390433 ERCC6L2Q5T890 1561 aa13.16□□□□□ -0.3
TRAV12-1-201ENST00000390433 KDM4FA0A1W2PPD8 638 aa13.16□□□□□ -0.3
TRAV12-1-201ENST00000390433 PBRM1Q86U86 1689 aa13.15□□□□□ -0.31
TRAV12-1-201ENST00000390433 CEP170Q5SW79 1584 aa13.09□□□□□ -0.31
TRAV12-1-201ENST00000390433 FAM69CQ0P6D2 419 aa13.08□□□□□ -0.32
TRAV12-1-201ENST00000390433 CUX1P39880 1505 aa13.07□□□□□ -0.32
TRAV12-1-201ENST00000390433 GRIN2AQ12879 1464 aa13.04□□□□□ -0.32
TRAV12-1-201ENST00000390433 KDM6BO15054 1643 aa13.03□□□□□ -0.32
TRAV12-1-201ENST00000390433 ABCC10Q5T3U5 1492 aa13.03□□□□□ -0.32
TRAV12-1-201ENST00000390433 SHROOM2Q13796 1616 aa13.02□□□□□ -0.33
TRAV12-1-201ENST00000390433 NPM1P06748 294 aaKnown RBP eCLIP13.01□□□□□ -0.33
TRAV12-1-201ENST00000390433 NUP160Q12769 1436 aa13.01□□□□□ -0.33
TRAV12-1-201ENST00000390433 ABCA5Q8WWZ7 1642 aa13.01□□□□□ -0.33
TRAV12-1-201ENST00000390433 TSPOAP1O95153 1857 aa13□□□□□ -0.33
TRAV12-1-201ENST00000390433 SUPT5HO00267 1087 aaKnown RBP13□□□□□ -0.33
TRAV12-1-201ENST00000390433 ABCA10Q8WWZ4 1543 aa12.98□□□□□ -0.33
TRAV12-1-201ENST00000390433 DIP2BQ9P265 1576 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms