RNA–Protein interactions for RNA: ENST00000390381.3

TRBV5-1-201, Transcript of T cell receptor beta variable 5-1, humanhuman

APPRIS P1 BASIC

Gene TRBV5-1, Length 652 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-1-201ENST00000390381 NISCHQ9Y2I1 1504 aa20.89■□□□□ 0.94
TRBV5-1-201ENST00000390381 ABCC9O60706 1549 aa18.76■□□□□ 0.59
TRBV5-1-201ENST00000390381 CCDC180Q9P1Z9 1646 aa18.73■□□□□ 0.59
TRBV5-1-201ENST00000390381 RB1CC1Q8TDY2 1594 aa17.88■□□□□ 0.45
TRBV5-1-201ENST00000390381 NACADO15069 1562 aa17.76■□□□□ 0.43
TRBV5-1-201ENST00000390381 DCAF8L2P0C7V8 631 aa17.75■□□□□ 0.43
TRBV5-1-201ENST00000390381 DNAJC5BQ9UF47 199 aa17.56■□□□□ 0.4
TRBV5-1-201ENST00000390381 MYO15BQ96JP2 1530 aa17.52■□□□□ 0.4
TRBV5-1-201ENST00000390381 PABPN1Q86U42 306 aaKnown RBP eCLIP17.5■□□□□ 0.39
TRBV5-1-201ENST00000390381 ZCCHC6Q5VYS8 1495 aaKnown RBP17.31■□□□□ 0.36
TRBV5-1-201ENST00000390381 UNC13AQ9UPW8 1703 aa17.29■□□□□ 0.36
TRBV5-1-201ENST00000390381 DCAF1Q9Y4B6 1507 aa17.28■□□□□ 0.36
TRBV5-1-201ENST00000390381 BICRAQ9NZM4 1560 aa17.26■□□□□ 0.35
TRBV5-1-201ENST00000390381 SHROOM4Q9ULL8 1493 aa17.17■□□□□ 0.34
TRBV5-1-201ENST00000390381 SCRIBQ14160 1630 aa17.06■□□□□ 0.32
TRBV5-1-201ENST00000390381 CECR2Q9BXF3 1484 aa16.93■□□□□ 0.3
TRBV5-1-201ENST00000390381 CC2D2AQ9P2K1 1620 aa16.92■□□□□ 0.3
TRBV5-1-201ENST00000390381 EIF4G1Q04637 1599 aaKnown RBP16.89■□□□□ 0.3
TRBV5-1-201ENST00000390381 NCAPD3P42695 1498 aa16.4■□□□□ 0.22
TRBV5-1-201ENST00000390381 ATAD2BQ9ULI0 1458 aa16.33■□□□□ 0.2
TRBV5-1-201ENST00000390381 SMARCA2P51531 1590 aa16.32■□□□□ 0.2
TRBV5-1-201ENST00000390381 ERCC6Q03468 1493 aa16.28■□□□□ 0.2
TRBV5-1-201ENST00000390381 SMARCA4P51532 1647 aa16.27■□□□□ 0.2
TRBV5-1-201ENST00000390381 BAZ1AQ9NRL2 1556 aaPredicted RBP16.26■□□□□ 0.19
TRBV5-1-201ENST00000390381 HMGXB3Q12766 1538 aa16.25■□□□□ 0.19
TRBV5-1-201ENST00000390381 DNAJC5Q9H3Z4 198 aa16.23■□□□□ 0.19
TRBV5-1-201ENST00000390381 CUX2O14529 1486 aa16.22■□□□□ 0.19
TRBV5-1-201ENST00000390381 BAZ1BQ9UIG0 1483 aaKnown RBP16.2■□□□□ 0.18
TRBV5-1-201ENST00000390381 PEG3Q9GZU2 1588 aa16.13■□□□□ 0.17
TRBV5-1-201ENST00000390381 NESP48681 1621 aa16.08■□□□□ 0.16
TRBV5-1-201ENST00000390381 MROH2BQ7Z745 1585 aa16.07■□□□□ 0.16
TRBV5-1-201ENST00000390381 LAMC3Q9Y6N6 1575 aa16.01■□□□□ 0.15
TRBV5-1-201ENST00000390381 PDS5BQ9NTI5 1447 aa16■□□□□ 0.15
TRBV5-1-201ENST00000390381 CADPSQ9ULU8 1353 aa15.92■□□□□ 0.14
TRBV5-1-201ENST00000390381 THOC2Q8NI27 1593 aaKnown RBP15.89■□□□□ 0.13
TRBV5-1-201ENST00000390381 WIZO95785 1651 aa15.84■□□□□ 0.13
TRBV5-1-201ENST00000390381 KIF21AQ7Z4S6 1674 aa15.83■□□□□ 0.12
TRBV5-1-201ENST00000390381 MRC2Q9UBG0 1479 aa15.81■□□□□ 0.12
TRBV5-1-201ENST00000390381 RSF1Q96T23 1441 aaPredicted RBP15.77■□□□□ 0.12
TRBV5-1-201ENST00000390381 CEP164Q9UPV0 1460 aa15.75■□□□□ 0.11
TRBV5-1-201ENST00000390381 WDR62O43379 1518 aa15.73■□□□□ 0.11
TRBV5-1-201ENST00000390381 FANCD2Q9BXW9 1451 aa15.72■□□□□ 0.11
TRBV5-1-201ENST00000390381 CFTRP13569 1480 aa15.71■□□□□ 0.11
TRBV5-1-201ENST00000390381 TOP2AP11388 1531 aaKnown RBP15.71■□□□□ 0.11
TRBV5-1-201ENST00000390381 URB2Q14146 1524 aaKnown RBP15.54■□□□□ 0.08
TRBV5-1-201ENST00000390381 OSCARQ8IYS5 282 aa15.54■□□□□ 0.08
TRBV5-1-201ENST00000390381 CCDC88BA6NC98 1476 aa15.53■□□□□ 0.08
TRBV5-1-201ENST00000390381 TRIM41Q8WV44 630 aa15.53■□□□□ 0.08
TRBV5-1-201ENST00000390381 IFT140Q96RY7 1462 aa15.45■□□□□ 0.06
TRBV5-1-201ENST00000390381 ABCC8Q09428 1581 aa15.45■□□□□ 0.06
TRBV5-1-201ENST00000390381 PRDM2Q13029 1718 aa15.43■□□□□ 0.06
TRBV5-1-201ENST00000390381 TOPBP1Q92547 1522 aa15.4■□□□□ 0.06
TRBV5-1-201ENST00000390381 ZNF608Q9ULD9 1512 aaPredicted RBP15.35■□□□□ 0.05
TRBV5-1-201ENST00000390381 DNMBPQ6XZF7 1577 aa15.34■□□□□ 0.05
TRBV5-1-201ENST00000390381 EIF4G3O43432 1585 aaKnown RBP15.26■□□□□ 0.03
TRBV5-1-201ENST00000390381 AQRO60306 1485 aaKnown RBP eCLIP15.25■□□□□ 0.03
TRBV5-1-201ENST00000390381 POLA1P09884 1462 aaPredicted RBP15.25■□□□□ 0.03
TRBV5-1-201ENST00000390381 FBLN2P98095 1184 aa15.24■□□□□ 0.03
TRBV5-1-201ENST00000390381 SOGA1O94964 1423 aa15.23■□□□□ 0.03
TRBV5-1-201ENST00000390381 TARBP1Q13395 1621 aaKnown RBP15.21■□□□□ 0.03
TRBV5-1-201ENST00000390381 ARHGEF11O15085 1522 aa15.19■□□□□ 0.02
TRBV5-1-201ENST00000390381 RIMBP3CA6NJZ7 1639 aa15.19■□□□□ 0.02
TRBV5-1-201ENST00000390381 RIMBP3BA6NNM3 1639 aa15.19■□□□□ 0.02
TRBV5-1-201ENST00000390381 RIMBP3Q9UFD9 1639 aa15.19■□□□□ 0.02
TRBV5-1-201ENST00000390381 TDRD9Q8NDG6 1382 aaKnown RBP15.18■□□□□ 0.02
TRBV5-1-201ENST00000390381 RAD54L2Q9Y4B4 1467 aa15.17■□□□□ 0.02
TRBV5-1-201ENST00000390381 FGD5Q6ZNL6 1462 aa15.15■□□□□ 0.02
TRBV5-1-201ENST00000390381 SUPT5HO00267 1087 aaKnown RBP15.15■□□□□ 0.02
TRBV5-1-201ENST00000390381 CYB5RLQ6IPT4 315 aa15.15■□□□□ 0.02
TRBV5-1-201ENST00000390381 CHMP7Q8WUX9 453 aaPredicted RBP15.14■□□□□ 0.01
TRBV5-1-201ENST00000390381 WDR97A6NE52 1622 aa15.14■□□□□ 0.01
TRBV5-1-201ENST00000390381 CUX1P39880 1505 aa15.1■□□□□ 0.01
TRBV5-1-201ENST00000390381 CHD1O14646 1710 aa15.09■□□□□ 0.01
TRBV5-1-201ENST00000390381 GRIN2BQ13224 1484 aa15.09■□□□□ 0.01
TRBV5-1-201ENST00000390381 SNAPC4Q5SXM2 1469 aa15.08■□□□□ 0.01
TRBV5-1-201ENST00000390381 MAGI1Q96QZ7 1491 aaPredicted RBP15.08■□□□□ 0.01
TRBV5-1-201ENST00000390381 SYNJ1O43426 1573 aa15.03■□□□□ -0
TRBV5-1-201ENST00000390381 SYNJ2O15056 1496 aa15.03■□□□□ -0
TRBV5-1-201ENST00000390381 TRHP20396 242 aaPredicted RBP15.03■□□□□ -0
TRBV5-1-201ENST00000390381 GAPVD1Q14C86 1478 aa15.02■□□□□ -0
TRBV5-1-201ENST00000390381 ARAP1Q96P48 1450 aa15.02■□□□□ -0
TRBV5-1-201ENST00000390381 WRNQ14191 1432 aaPredicted RBP eCLIP15□□□□□ -0.01
TRBV5-1-201ENST00000390381 ABCA10Q8WWZ4 1543 aa14.99□□□□□ -0.01
TRBV5-1-201ENST00000390381 CLASP1Q7Z460 1538 aa14.97□□□□□ -0.01
TRBV5-1-201ENST00000390381 PBRM1Q86U86 1689 aa14.91□□□□□ -0.02
TRBV5-1-201ENST00000390381 ABCA5Q8WWZ7 1642 aa14.91□□□□□ -0.02
TRBV5-1-201ENST00000390381 TOP2BQ02880 1626 aa14.88□□□□□ -0.03
TRBV5-1-201ENST00000390381 GRIN2AQ12879 1464 aa14.87□□□□□ -0.03
TRBV5-1-201ENST00000390381 FHAD1B1AJZ9 1412 aa14.85□□□□□ -0.03
TRBV5-1-201ENST00000390381 BIVM-ERCC5R4GMW8 1640 aa14.84□□□□□ -0.03
TRBV5-1-201ENST00000390381 ERICH3Q5RHP9 1530 aa14.82□□□□□ -0.04
TRBV5-1-201ENST00000390381 NUP160Q12769 1436 aa14.81□□□□□ -0.04
TRBV5-1-201ENST00000390381 ADAMTS12P58397 1594 aa14.81□□□□□ -0.04
TRBV5-1-201ENST00000390381 CEP170Q5SW79 1584 aa14.76□□□□□ -0.05
TRBV5-1-201ENST00000390381 JPH4Q96JJ6 628 aa14.72□□□□□ -0.05
TRBV5-1-201ENST00000390381 PRG4Q92954 1404 aaPredicted RBP14.71□□□□□ -0.05
TRBV5-1-201ENST00000390381 SHROOM2Q13796 1616 aa14.7□□□□□ -0.06
TRBV5-1-201ENST00000390381 ERCC6L2Q5T890 1561 aa14.69□□□□□ -0.06
TRBV5-1-201ENST00000390381 KIF27Q86VH2 1401 aa14.67□□□□□ -0.06
TRBV5-1-201ENST00000390381 NPM1P06748 294 aaKnown RBP eCLIP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms