RNA–Protein interactions for RNA: ENST00000390369.2

TRBV7-4-201, Transcript of T cell receptor beta variable 7-4 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRBV7-4, Length 347 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-4-201ENST00000390369 NISCHQ9Y2I1 1504 aa21.25■□□□□ 0.99
TRBV7-4-201ENST00000390369 ABCC9O60706 1549 aa19.19■□□□□ 0.66
TRBV7-4-201ENST00000390369 CCDC180Q9P1Z9 1646 aa19.11■□□□□ 0.65
TRBV7-4-201ENST00000390369 RB1CC1Q8TDY2 1594 aa18.3■□□□□ 0.52
TRBV7-4-201ENST00000390369 NACADO15069 1562 aa18.17■□□□□ 0.5
TRBV7-4-201ENST00000390369 DNAJC5BQ9UF47 199 aa18.16■□□□□ 0.5
TRBV7-4-201ENST00000390369 MYO15BQ96JP2 1530 aa17.98■□□□□ 0.47
TRBV7-4-201ENST00000390369 DCAF8L2P0C7V8 631 aa17.95■□□□□ 0.46
TRBV7-4-201ENST00000390369 PABPN1Q86U42 306 aaKnown RBP eCLIP17.85■□□□□ 0.45
TRBV7-4-201ENST00000390369 BICRAQ9NZM4 1560 aa17.69■□□□□ 0.42
TRBV7-4-201ENST00000390369 UNC13AQ9UPW8 1703 aa17.68■□□□□ 0.42
TRBV7-4-201ENST00000390369 SHROOM4Q9ULL8 1493 aa17.65■□□□□ 0.42
TRBV7-4-201ENST00000390369 DCAF1Q9Y4B6 1507 aa17.64■□□□□ 0.41
TRBV7-4-201ENST00000390369 ZCCHC6Q5VYS8 1495 aaKnown RBP17.56■□□□□ 0.4
TRBV7-4-201ENST00000390369 CECR2Q9BXF3 1484 aa17.37■□□□□ 0.37
TRBV7-4-201ENST00000390369 CC2D2AQ9P2K1 1620 aa17.34■□□□□ 0.37
TRBV7-4-201ENST00000390369 EIF4G1Q04637 1599 aaKnown RBP17.3■□□□□ 0.36
TRBV7-4-201ENST00000390369 SCRIBQ14160 1630 aa17.28■□□□□ 0.36
TRBV7-4-201ENST00000390369 DNAJC5Q9H3Z4 198 aa16.93■□□□□ 0.3
TRBV7-4-201ENST00000390369 NCAPD3P42695 1498 aa16.81■□□□□ 0.28
TRBV7-4-201ENST00000390369 CUX2O14529 1486 aa16.74■□□□□ 0.27
TRBV7-4-201ENST00000390369 ATAD2BQ9ULI0 1458 aa16.67■□□□□ 0.26
TRBV7-4-201ENST00000390369 SMARCA2P51531 1590 aa16.65■□□□□ 0.26
TRBV7-4-201ENST00000390369 ERCC6Q03468 1493 aa16.65■□□□□ 0.26
TRBV7-4-201ENST00000390369 HMGXB3Q12766 1538 aa16.62■□□□□ 0.25
TRBV7-4-201ENST00000390369 SMARCA4P51532 1647 aa16.55■□□□□ 0.24
TRBV7-4-201ENST00000390369 BAZ1AQ9NRL2 1556 aaPredicted RBP16.53■□□□□ 0.24
TRBV7-4-201ENST00000390369 PEG3Q9GZU2 1588 aa16.49■□□□□ 0.23
TRBV7-4-201ENST00000390369 BAZ1BQ9UIG0 1483 aaKnown RBP16.48■□□□□ 0.23
TRBV7-4-201ENST00000390369 NESP48681 1621 aa16.41■□□□□ 0.22
TRBV7-4-201ENST00000390369 LAMC3Q9Y6N6 1575 aa16.41■□□□□ 0.22
TRBV7-4-201ENST00000390369 PDS5BQ9NTI5 1447 aa16.38■□□□□ 0.21
TRBV7-4-201ENST00000390369 MROH2BQ7Z745 1585 aa16.3■□□□□ 0.2
TRBV7-4-201ENST00000390369 THOC2Q8NI27 1593 aaKnown RBP16.3■□□□□ 0.2
TRBV7-4-201ENST00000390369 CADPSQ9ULU8 1353 aa16.28■□□□□ 0.2
TRBV7-4-201ENST00000390369 MRC2Q9UBG0 1479 aa16.16■□□□□ 0.18
TRBV7-4-201ENST00000390369 KIF21AQ7Z4S6 1674 aa16.14■□□□□ 0.18
TRBV7-4-201ENST00000390369 WDR62O43379 1518 aa16.12■□□□□ 0.17
TRBV7-4-201ENST00000390369 CEP164Q9UPV0 1460 aa16.06■□□□□ 0.16
TRBV7-4-201ENST00000390369 CFTRP13569 1480 aa16.05■□□□□ 0.16
TRBV7-4-201ENST00000390369 WIZO95785 1651 aa16.04■□□□□ 0.16
TRBV7-4-201ENST00000390369 FANCD2Q9BXW9 1451 aa16.03■□□□□ 0.16
TRBV7-4-201ENST00000390369 OSCARQ8IYS5 282 aa15.99■□□□□ 0.15
TRBV7-4-201ENST00000390369 RSF1Q96T23 1441 aaPredicted RBP15.97■□□□□ 0.15
TRBV7-4-201ENST00000390369 TRIM41Q8WV44 630 aa15.97■□□□□ 0.15
TRBV7-4-201ENST00000390369 TOP2AP11388 1531 aaKnown RBP15.93■□□□□ 0.14
TRBV7-4-201ENST00000390369 URB2Q14146 1524 aaKnown RBP15.86■□□□□ 0.13
TRBV7-4-201ENST00000390369 IFT140Q96RY7 1462 aa15.79■□□□□ 0.12
TRBV7-4-201ENST00000390369 ABCC8Q09428 1581 aa15.79■□□□□ 0.12
TRBV7-4-201ENST00000390369 CCDC88BA6NC98 1476 aa15.75■□□□□ 0.11
TRBV7-4-201ENST00000390369 PRDM2Q13029 1718 aa15.71■□□□□ 0.11
TRBV7-4-201ENST00000390369 TOPBP1Q92547 1522 aa15.68■□□□□ 0.1
TRBV7-4-201ENST00000390369 ZNF608Q9ULD9 1512 aaPredicted RBP15.66■□□□□ 0.1
TRBV7-4-201ENST00000390369 DNMBPQ6XZF7 1577 aa15.62■□□□□ 0.09
TRBV7-4-201ENST00000390369 RIMBP3CA6NJZ7 1639 aa15.61■□□□□ 0.09
TRBV7-4-201ENST00000390369 RIMBP3BA6NNM3 1639 aa15.61■□□□□ 0.09
TRBV7-4-201ENST00000390369 RIMBP3Q9UFD9 1639 aa15.61■□□□□ 0.09
TRBV7-4-201ENST00000390369 ARHGEF11O15085 1522 aa15.61■□□□□ 0.09
TRBV7-4-201ENST00000390369 EIF4G3O43432 1585 aaKnown RBP15.56■□□□□ 0.08
TRBV7-4-201ENST00000390369 AQRO60306 1485 aaKnown RBP eCLIP15.54■□□□□ 0.08
TRBV7-4-201ENST00000390369 CYB5RLQ6IPT4 315 aa15.54■□□□□ 0.08
TRBV7-4-201ENST00000390369 TARBP1Q13395 1621 aaKnown RBP15.54■□□□□ 0.08
TRBV7-4-201ENST00000390369 POLA1P09884 1462 aaPredicted RBP15.52■□□□□ 0.08
TRBV7-4-201ENST00000390369 SOGA1O94964 1423 aa15.5■□□□□ 0.07
TRBV7-4-201ENST00000390369 WDR97A6NE52 1622 aa15.5■□□□□ 0.07
TRBV7-4-201ENST00000390369 FBLN2P98095 1184 aa15.49■□□□□ 0.07
TRBV7-4-201ENST00000390369 TDRD9Q8NDG6 1382 aaKnown RBP15.43■□□□□ 0.06
TRBV7-4-201ENST00000390369 ARAP1Q96P48 1450 aa15.42■□□□□ 0.06
TRBV7-4-201ENST00000390369 CHMP7Q8WUX9 453 aaPredicted RBP15.42■□□□□ 0.06
TRBV7-4-201ENST00000390369 MAGI1Q96QZ7 1491 aaPredicted RBP15.41■□□□□ 0.06
TRBV7-4-201ENST00000390369 RAD54L2Q9Y4B4 1467 aa15.41■□□□□ 0.06
TRBV7-4-201ENST00000390369 TRHP20396 242 aaPredicted RBP15.41■□□□□ 0.06
TRBV7-4-201ENST00000390369 CHD1O14646 1710 aa15.4■□□□□ 0.06
TRBV7-4-201ENST00000390369 GRIN2BQ13224 1484 aa15.39■□□□□ 0.05
TRBV7-4-201ENST00000390369 FGD5Q6ZNL6 1462 aa15.38■□□□□ 0.05
TRBV7-4-201ENST00000390369 SNAPC4Q5SXM2 1469 aa15.36■□□□□ 0.05
TRBV7-4-201ENST00000390369 SYNJ1O43426 1573 aa15.36■□□□□ 0.05
TRBV7-4-201ENST00000390369 SYNJ2O15056 1496 aa15.35■□□□□ 0.05
TRBV7-4-201ENST00000390369 CLASP1Q7Z460 1538 aa15.34■□□□□ 0.05
TRBV7-4-201ENST00000390369 CUX1P39880 1505 aa15.33■□□□□ 0.04
TRBV7-4-201ENST00000390369 GAPVD1Q14C86 1478 aa15.28■□□□□ 0.04
TRBV7-4-201ENST00000390369 ABCA10Q8WWZ4 1543 aa15.27■□□□□ 0.03
TRBV7-4-201ENST00000390369 WRNQ14191 1432 aaPredicted RBP eCLIP15.22■□□□□ 0.03
TRBV7-4-201ENST00000390369 ABCA5Q8WWZ7 1642 aa15.17■□□□□ 0.02
TRBV7-4-201ENST00000390369 PBRM1Q86U86 1689 aa15.16■□□□□ 0.02
TRBV7-4-201ENST00000390369 GRIN2AQ12879 1464 aa15.15■□□□□ 0.02
TRBV7-4-201ENST00000390369 NUP160Q12769 1436 aa15.14■□□□□ 0.01
TRBV7-4-201ENST00000390369 FHAD1B1AJZ9 1412 aa15.12■□□□□ 0.01
TRBV7-4-201ENST00000390369 AEBP2Q6ZN18 517 aaPredicted RBP15.11■□□□□ 0.01
TRBV7-4-201ENST00000390369 SUPT5HO00267 1087 aaKnown RBP15.09■□□□□ 0.01
TRBV7-4-201ENST00000390369 ERICH3Q5RHP9 1530 aa15.08■□□□□ 0.01
TRBV7-4-201ENST00000390369 TOP2BQ02880 1626 aa15.08■□□□□ 0
TRBV7-4-201ENST00000390369 ADAMTS12P58397 1594 aa15.06■□□□□ 0
TRBV7-4-201ENST00000390369 BIVM-ERCC5R4GMW8 1640 aa15.04■□□□□ -0
TRBV7-4-201ENST00000390369 CEP170Q5SW79 1584 aa15.04■□□□□ -0
TRBV7-4-201ENST00000390369 SHROOM2Q13796 1616 aa15.03■□□□□ -0
TRBV7-4-201ENST00000390369 JPH4Q96JJ6 628 aa15.02■□□□□ -0
TRBV7-4-201ENST00000390369 ERCC6L2Q5T890 1561 aa14.99□□□□□ -0.01
TRBV7-4-201ENST00000390369 PRG4Q92954 1404 aaPredicted RBP14.98□□□□□ -0.01
TRBV7-4-201ENST00000390369 NPM1P06748 294 aaKnown RBP eCLIP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms