RNA–Protein interactions for RNA: ENST00000390353.2

TRBV6-1-201, Transcript of T cell receptor beta variable 6-1, humanhuman

APPRIS P1 BASIC

Gene TRBV6-1, Length 401 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1-201ENST00000390353 NISCHQ9Y2I1 1504 aa20.64■□□□□ 0.9
TRBV6-1-201ENST00000390353 ABCC9O60706 1549 aa18.52■□□□□ 0.56
TRBV6-1-201ENST00000390353 CCDC180Q9P1Z9 1646 aa18.5■□□□□ 0.55
TRBV6-1-201ENST00000390353 RB1CC1Q8TDY2 1594 aa17.67■□□□□ 0.42
TRBV6-1-201ENST00000390353 NACADO15069 1562 aa17.56■□□□□ 0.4
TRBV6-1-201ENST00000390353 DCAF8L2P0C7V8 631 aa17.49■□□□□ 0.39
TRBV6-1-201ENST00000390353 MYO15BQ96JP2 1530 aa17.36■□□□□ 0.37
TRBV6-1-201ENST00000390353 DNAJC5BQ9UF47 199 aa17.32■□□□□ 0.36
TRBV6-1-201ENST00000390353 PABPN1Q86U42 306 aaKnown RBP eCLIP17.25■□□□□ 0.35
TRBV6-1-201ENST00000390353 DCAF1Q9Y4B6 1507 aa17.11■□□□□ 0.33
TRBV6-1-201ENST00000390353 ZCCHC6Q5VYS8 1495 aaKnown RBP17.1■□□□□ 0.33
TRBV6-1-201ENST00000390353 BICRAQ9NZM4 1560 aa17.03■□□□□ 0.32
TRBV6-1-201ENST00000390353 SHROOM4Q9ULL8 1493 aa17.03■□□□□ 0.32
TRBV6-1-201ENST00000390353 UNC13AQ9UPW8 1703 aa17.02■□□□□ 0.32
TRBV6-1-201ENST00000390353 SCRIBQ14160 1630 aa16.82■□□□□ 0.28
TRBV6-1-201ENST00000390353 CECR2Q9BXF3 1484 aa16.73■□□□□ 0.27
TRBV6-1-201ENST00000390353 CC2D2AQ9P2K1 1620 aa16.7■□□□□ 0.26
TRBV6-1-201ENST00000390353 EIF4G1Q04637 1599 aaKnown RBP16.68■□□□□ 0.26
TRBV6-1-201ENST00000390353 NCAPD3P42695 1498 aa16.22■□□□□ 0.19
TRBV6-1-201ENST00000390353 ATAD2BQ9ULI0 1458 aa16.14■□□□□ 0.17
TRBV6-1-201ENST00000390353 SMARCA2P51531 1590 aa16.13■□□□□ 0.17
TRBV6-1-201ENST00000390353 ERCC6Q03468 1493 aa16.08■□□□□ 0.16
TRBV6-1-201ENST00000390353 HMGXB3Q12766 1538 aa16.08■□□□□ 0.16
TRBV6-1-201ENST00000390353 SMARCA4P51532 1647 aa16.06■□□□□ 0.16
TRBV6-1-201ENST00000390353 BAZ1AQ9NRL2 1556 aaPredicted RBP16.06■□□□□ 0.16
TRBV6-1-201ENST00000390353 CUX2O14529 1486 aa16.05■□□□□ 0.16
TRBV6-1-201ENST00000390353 DNAJC5Q9H3Z4 198 aa16.04■□□□□ 0.16
TRBV6-1-201ENST00000390353 BAZ1BQ9UIG0 1483 aaKnown RBP16.01■□□□□ 0.15
TRBV6-1-201ENST00000390353 PEG3Q9GZU2 1588 aa15.96■□□□□ 0.14
TRBV6-1-201ENST00000390353 MROH2BQ7Z745 1585 aa15.85■□□□□ 0.13
TRBV6-1-201ENST00000390353 NESP48681 1621 aa15.85■□□□□ 0.13
TRBV6-1-201ENST00000390353 LAMC3Q9Y6N6 1575 aa15.83■□□□□ 0.13
TRBV6-1-201ENST00000390353 PDS5BQ9NTI5 1447 aa15.82■□□□□ 0.12
TRBV6-1-201ENST00000390353 CADPSQ9ULU8 1353 aa15.75■□□□□ 0.11
TRBV6-1-201ENST00000390353 THOC2Q8NI27 1593 aaKnown RBP15.7■□□□□ 0.1
TRBV6-1-201ENST00000390353 MRC2Q9UBG0 1479 aa15.63■□□□□ 0.09
TRBV6-1-201ENST00000390353 WIZO95785 1651 aa15.6■□□□□ 0.09
TRBV6-1-201ENST00000390353 KIF21AQ7Z4S6 1674 aa15.59■□□□□ 0.09
TRBV6-1-201ENST00000390353 RSF1Q96T23 1441 aaPredicted RBP15.58■□□□□ 0.08
TRBV6-1-201ENST00000390353 CEP164Q9UPV0 1460 aa15.57■□□□□ 0.08
TRBV6-1-201ENST00000390353 WDR62O43379 1518 aa15.55■□□□□ 0.08
TRBV6-1-201ENST00000390353 CFTRP13569 1480 aa15.53■□□□□ 0.08
TRBV6-1-201ENST00000390353 FANCD2Q9BXW9 1451 aa15.53■□□□□ 0.08
TRBV6-1-201ENST00000390353 TOP2AP11388 1531 aaKnown RBP15.52■□□□□ 0.07
TRBV6-1-201ENST00000390353 OSCARQ8IYS5 282 aa15.36■□□□□ 0.05
TRBV6-1-201ENST00000390353 URB2Q14146 1524 aaKnown RBP15.35■□□□□ 0.05
TRBV6-1-201ENST00000390353 CCDC88BA6NC98 1476 aa15.33■□□□□ 0.04
TRBV6-1-201ENST00000390353 TRIM41Q8WV44 630 aa15.31■□□□□ 0.04
TRBV6-1-201ENST00000390353 ABCC8Q09428 1581 aa15.28■□□□□ 0.04
TRBV6-1-201ENST00000390353 IFT140Q96RY7 1462 aa15.28■□□□□ 0.04
TRBV6-1-201ENST00000390353 PRDM2Q13029 1718 aa15.22■□□□□ 0.03
TRBV6-1-201ENST00000390353 TOPBP1Q92547 1522 aa15.21■□□□□ 0.03
TRBV6-1-201ENST00000390353 DNMBPQ6XZF7 1577 aa15.15■□□□□ 0.02
TRBV6-1-201ENST00000390353 ZNF608Q9ULD9 1512 aaPredicted RBP15.15■□□□□ 0.02
TRBV6-1-201ENST00000390353 EIF4G3O43432 1585 aaKnown RBP15.06■□□□□ 0
TRBV6-1-201ENST00000390353 AQRO60306 1485 aaKnown RBP eCLIP15.05■□□□□ -0
TRBV6-1-201ENST00000390353 POLA1P09884 1462 aaPredicted RBP15.05■□□□□ -0
TRBV6-1-201ENST00000390353 SOGA1O94964 1423 aa15.03■□□□□ -0
TRBV6-1-201ENST00000390353 FBLN2P98095 1184 aa15.03■□□□□ -0
TRBV6-1-201ENST00000390353 TARBP1Q13395 1621 aaKnown RBP15.02□□□□□ -0.01
TRBV6-1-201ENST00000390353 ARHGEF11O15085 1522 aa15.01□□□□□ -0.01
TRBV6-1-201ENST00000390353 RIMBP3CA6NJZ7 1639 aa14.99□□□□□ -0.01
TRBV6-1-201ENST00000390353 RIMBP3BA6NNM3 1639 aa14.99□□□□□ -0.01
TRBV6-1-201ENST00000390353 RIMBP3Q9UFD9 1639 aa14.99□□□□□ -0.01
TRBV6-1-201ENST00000390353 WDR97A6NE52 1622 aa14.98□□□□□ -0.01
TRBV6-1-201ENST00000390353 TDRD9Q8NDG6 1382 aaKnown RBP14.98□□□□□ -0.01
TRBV6-1-201ENST00000390353 RAD54L2Q9Y4B4 1467 aa14.96□□□□□ -0.01
TRBV6-1-201ENST00000390353 FGD5Q6ZNL6 1462 aa14.95□□□□□ -0.02
TRBV6-1-201ENST00000390353 CYB5RLQ6IPT4 315 aa14.94□□□□□ -0.02
TRBV6-1-201ENST00000390353 CHMP7Q8WUX9 453 aaPredicted RBP14.94□□□□□ -0.02
TRBV6-1-201ENST00000390353 MAGI1Q96QZ7 1491 aaPredicted RBP14.92□□□□□ -0.02
TRBV6-1-201ENST00000390353 GRIN2BQ13224 1484 aa14.91□□□□□ -0.02
TRBV6-1-201ENST00000390353 SNAPC4Q5SXM2 1469 aa14.9□□□□□ -0.02
TRBV6-1-201ENST00000390353 SUPT5HO00267 1087 aaKnown RBP14.9□□□□□ -0.02
TRBV6-1-201ENST00000390353 CUX1P39880 1505 aa14.9□□□□□ -0.02
TRBV6-1-201ENST00000390353 CHD1O14646 1710 aa14.87□□□□□ -0.03
TRBV6-1-201ENST00000390353 SYNJ2O15056 1496 aa14.87□□□□□ -0.03
TRBV6-1-201ENST00000390353 SYNJ1O43426 1573 aa14.85□□□□□ -0.03
TRBV6-1-201ENST00000390353 GAPVD1Q14C86 1478 aa14.83□□□□□ -0.03
TRBV6-1-201ENST00000390353 ARAP1Q96P48 1450 aa14.83□□□□□ -0.03
TRBV6-1-201ENST00000390353 TRHP20396 242 aaPredicted RBP14.82□□□□□ -0.04
TRBV6-1-201ENST00000390353 WRNQ14191 1432 aaPredicted RBP eCLIP14.82□□□□□ -0.04
TRBV6-1-201ENST00000390353 ABCA10Q8WWZ4 1543 aa14.82□□□□□ -0.04
TRBV6-1-201ENST00000390353 CLASP1Q7Z460 1538 aa14.8□□□□□ -0.04
TRBV6-1-201ENST00000390353 ABCA5Q8WWZ7 1642 aa14.72□□□□□ -0.05
TRBV6-1-201ENST00000390353 GRIN2AQ12879 1464 aa14.69□□□□□ -0.06
TRBV6-1-201ENST00000390353 PBRM1Q86U86 1689 aa14.69□□□□□ -0.06
TRBV6-1-201ENST00000390353 TOP2BQ02880 1626 aa14.69□□□□□ -0.06
TRBV6-1-201ENST00000390353 FHAD1B1AJZ9 1412 aa14.68□□□□□ -0.06
TRBV6-1-201ENST00000390353 NUP160Q12769 1436 aa14.65□□□□□ -0.06
TRBV6-1-201ENST00000390353 BIVM-ERCC5R4GMW8 1640 aa14.64□□□□□ -0.07
TRBV6-1-201ENST00000390353 ERICH3Q5RHP9 1530 aa14.64□□□□□ -0.07
TRBV6-1-201ENST00000390353 ADAMTS12P58397 1594 aa14.63□□□□□ -0.07
TRBV6-1-201ENST00000390353 CEP170Q5SW79 1584 aa14.56□□□□□ -0.08
TRBV6-1-201ENST00000390353 JPH4Q96JJ6 628 aa14.53□□□□□ -0.08
TRBV6-1-201ENST00000390353 PRG4Q92954 1404 aaPredicted RBP14.52□□□□□ -0.08
TRBV6-1-201ENST00000390353 SHROOM2Q13796 1616 aa14.52□□□□□ -0.09
TRBV6-1-201ENST00000390353 KIF27Q86VH2 1401 aa14.5□□□□□ -0.09
TRBV6-1-201ENST00000390353 ERCC6L2Q5T890 1561 aa14.48□□□□□ -0.09
TRBV6-1-201ENST00000390353 NPM1P06748 294 aaKnown RBP eCLIP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms