RNA–Protein interactions for RNA: ENST00000390346.2

TRGV3-201, Transcript of T cell receptor gamma variable 3, humanhuman

APPRIS P1 BASIC

Gene TRGV3, Length 537 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3-201ENST00000390346 NISCHQ9Y2I1 1504 aa19.35■□□□□ 0.69
TRGV3-201ENST00000390346 ABCC9O60706 1549 aa18.49■□□□□ 0.55
TRGV3-201ENST00000390346 DNAJC5BQ9UF47 199 aa18.1■□□□□ 0.49
TRGV3-201ENST00000390346 AEBP2Q6ZN18 517 aaPredicted RBP17.86■□□□□ 0.45
TRGV3-201ENST00000390346 CCDC180Q9P1Z9 1646 aa17.76■□□□□ 0.43
TRGV3-201ENST00000390346 RB1CC1Q8TDY2 1594 aa17.28■□□□□ 0.36
TRGV3-201ENST00000390346 DNAJC5Q9H3Z4 198 aa17.24■□□□□ 0.35
TRGV3-201ENST00000390346 PABPN1Q86U42 306 aaKnown RBP eCLIP17.08■□□□□ 0.32
TRGV3-201ENST00000390346 UNC13AQ9UPW8 1703 aa16.98■□□□□ 0.31
TRGV3-201ENST00000390346 NACADO15069 1562 aa16.97■□□□□ 0.31
TRGV3-201ENST00000390346 BICRAQ9NZM4 1560 aa16.81■□□□□ 0.28
TRGV3-201ENST00000390346 CHIC1Q5VXU3 224 aa16.8■□□□□ 0.28
TRGV3-201ENST00000390346 CECR2Q9BXF3 1484 aa16.74■□□□□ 0.27
TRGV3-201ENST00000390346 CC2D2AQ9P2K1 1620 aa16.7■□□□□ 0.26
TRGV3-201ENST00000390346 DCAF8L2P0C7V8 631 aa16.67■□□□□ 0.26
TRGV3-201ENST00000390346 SHROOM4Q9ULL8 1493 aa16.48■□□□□ 0.23
TRGV3-201ENST00000390346 MYO15BQ96JP2 1530 aa16.47■□□□□ 0.23
TRGV3-201ENST00000390346 EIF4G1Q04637 1599 aaKnown RBP16.45■□□□□ 0.22
TRGV3-201ENST00000390346 CUX2O14529 1486 aa16.29■□□□□ 0.2
TRGV3-201ENST00000390346 TRIM41Q8WV44 630 aa16.1■□□□□ 0.17
TRGV3-201ENST00000390346 SCRIBQ14160 1630 aa16.07■□□□□ 0.16
TRGV3-201ENST00000390346 ERCC6Q03468 1493 aa16.02■□□□□ 0.15
TRGV3-201ENST00000390346 DCAF1Q9Y4B6 1507 aa15.95■□□□□ 0.14
TRGV3-201ENST00000390346 ZCCHC6Q5VYS8 1495 aaKnown RBP15.84■□□□□ 0.13
TRGV3-201ENST00000390346 THOC2Q8NI27 1593 aaKnown RBP15.68■□□□□ 0.1
TRGV3-201ENST00000390346 NCAPD3P42695 1498 aa15.66■□□□□ 0.1
TRGV3-201ENST00000390346 NESP48681 1621 aa15.65■□□□□ 0.1
TRGV3-201ENST00000390346 SENP3Q9H4L4 574 aaPredicted RBP15.51■□□□□ 0.07
TRGV3-201ENST00000390346 KIF21AQ7Z4S6 1674 aa15.49■□□□□ 0.07
TRGV3-201ENST00000390346 ATAD2BQ9ULI0 1458 aa15.48■□□□□ 0.07
TRGV3-201ENST00000390346 SMARCA2P51531 1590 aa15.47■□□□□ 0.07
TRGV3-201ENST00000390346 HMGXB3Q12766 1538 aa15.47■□□□□ 0.07
TRGV3-201ENST00000390346 LAMC3Q9Y6N6 1575 aa15.46■□□□□ 0.07
TRGV3-201ENST00000390346 OSCARQ8IYS5 282 aa15.44■□□□□ 0.06
TRGV3-201ENST00000390346 BAZ1AQ9NRL2 1556 aaPredicted RBP15.44■□□□□ 0.06
TRGV3-201ENST00000390346 PDS5BQ9NTI5 1447 aa15.37■□□□□ 0.05
TRGV3-201ENST00000390346 RIMBP3CA6NJZ7 1639 aa15.32■□□□□ 0.04
TRGV3-201ENST00000390346 RIMBP3BA6NNM3 1639 aa15.32■□□□□ 0.04
TRGV3-201ENST00000390346 RIMBP3Q9UFD9 1639 aa15.32■□□□□ 0.04
TRGV3-201ENST00000390346 SMARCA4P51532 1647 aa15.28■□□□□ 0.04
TRGV3-201ENST00000390346 BAZ1BQ9UIG0 1483 aaKnown RBP15.27■□□□□ 0.04
TRGV3-201ENST00000390346 WDR62O43379 1518 aa15.27■□□□□ 0.03
TRGV3-201ENST00000390346 MRC2Q9UBG0 1479 aa15.27■□□□□ 0.03
TRGV3-201ENST00000390346 TRHP20396 242 aaPredicted RBP15.2■□□□□ 0.02
TRGV3-201ENST00000390346 POTEDQ86YR6 584 aa15.17■□□□□ 0.02
TRGV3-201ENST00000390346 ARHGEF11O15085 1522 aa15.16■□□□□ 0.02
TRGV3-201ENST00000390346 PEG3Q9GZU2 1588 aa15.15■□□□□ 0.02
TRGV3-201ENST00000390346 CADPSQ9ULU8 1353 aa15.13■□□□□ 0.01
TRGV3-201ENST00000390346 CYB5RLQ6IPT4 315 aa15.11■□□□□ 0.01
TRGV3-201ENST00000390346 PHF23Q9BUL5 403 aaPredicted RBP15.1■□□□□ 0.01
TRGV3-201ENST00000390346 CEP164Q9UPV0 1460 aa15.04■□□□□ -0
TRGV3-201ENST00000390346 FANCD2Q9BXW9 1451 aa14.95□□□□□ -0.02
TRGV3-201ENST00000390346 ARAP1Q96P48 1450 aa14.95□□□□□ -0.02
TRGV3-201ENST00000390346 MROH2BQ7Z745 1585 aa14.89□□□□□ -0.03
TRGV3-201ENST00000390346 URB2Q14146 1524 aaKnown RBP14.88□□□□□ -0.03
TRGV3-201ENST00000390346 ILDR1Q86SU0 546 aaPredicted RBP14.86□□□□□ -0.03
TRGV3-201ENST00000390346 ZNF608Q9ULD9 1512 aaPredicted RBP14.82□□□□□ -0.04
TRGV3-201ENST00000390346 CHD1O14646 1710 aa14.81□□□□□ -0.04
TRGV3-201ENST00000390346 RSF1Q96T23 1441 aaPredicted RBP14.81□□□□□ -0.04
TRGV3-201ENST00000390346 CFTRP13569 1480 aa14.8□□□□□ -0.04
TRGV3-201ENST00000390346 IFT140Q96RY7 1462 aa14.78□□□□□ -0.04
TRGV3-201ENST00000390346 EIF4G3O43432 1585 aaKnown RBP14.72□□□□□ -0.05
TRGV3-201ENST00000390346 WIZO95785 1651 aa14.7□□□□□ -0.06
TRGV3-201ENST00000390346 PRDM2Q13029 1718 aa14.68□□□□□ -0.06
TRGV3-201ENST00000390346 FBLN2P98095 1184 aa14.66□□□□□ -0.06
TRGV3-201ENST00000390346 AQRO60306 1485 aaKnown RBP eCLIP14.6□□□□□ -0.07
TRGV3-201ENST00000390346 TOPBP1Q92547 1522 aa14.59□□□□□ -0.07
TRGV3-201ENST00000390346 CLASP1Q7Z460 1538 aa14.58□□□□□ -0.08
TRGV3-201ENST00000390346 TARBP1Q13395 1621 aaKnown RBP14.55□□□□□ -0.08
TRGV3-201ENST00000390346 ABCC8Q09428 1581 aa14.54□□□□□ -0.08
TRGV3-201ENST00000390346 SYNJ1O43426 1573 aa14.5□□□□□ -0.09
TRGV3-201ENST00000390346 FOXD1Q16676 465 aa14.48□□□□□ -0.09
TRGV3-201ENST00000390346 GAPVD1Q14C86 1478 aa14.48□□□□□ -0.09
TRGV3-201ENST00000390346 KIF13AQ9H1H9 1805 aa14.48□□□□□ -0.09
TRGV3-201ENST00000390346 KDM4FA0A1W2PPD8 638 aa14.47□□□□□ -0.09
TRGV3-201ENST00000390346 DNMBPQ6XZF7 1577 aa14.47□□□□□ -0.09
TRGV3-201ENST00000390346 CHMP7Q8WUX9 453 aaPredicted RBP14.44□□□□□ -0.1
TRGV3-201ENST00000390346 TOP2AP11388 1531 aaKnown RBP14.42□□□□□ -0.1
TRGV3-201ENST00000390346 SNAPC4Q5SXM2 1469 aa14.4□□□□□ -0.1
TRGV3-201ENST00000390346 POLA1P09884 1462 aaPredicted RBP14.38□□□□□ -0.11
TRGV3-201ENST00000390346 TDRD9Q8NDG6 1382 aaKnown RBP14.37□□□□□ -0.11
TRGV3-201ENST00000390346 WDR97A6NE52 1622 aa14.36□□□□□ -0.11
TRGV3-201ENST00000390346 MAGI1Q96QZ7 1491 aaPredicted RBP14.36□□□□□ -0.11
TRGV3-201ENST00000390346 RAD54L2Q9Y4B4 1467 aa14.33□□□□□ -0.12
TRGV3-201ENST00000390346 SYNJ2O15056 1496 aa14.32□□□□□ -0.12
TRGV3-201ENST00000390346 SOGA1O94964 1423 aa14.32□□□□□ -0.12
TRGV3-201ENST00000390346 CCDC88BA6NC98 1476 aa14.28□□□□□ -0.12
TRGV3-201ENST00000390346 ERCC6L2Q5T890 1561 aa14.28□□□□□ -0.12
TRGV3-201ENST00000390346 GRIN2BQ13224 1484 aa14.27□□□□□ -0.12
TRGV3-201ENST00000390346 KDM6BO15054 1643 aa14.24□□□□□ -0.13
TRGV3-201ENST00000390346 FAM69CQ0P6D2 419 aa14.23□□□□□ -0.13
TRGV3-201ENST00000390346 FBXO41Q8TF61 875 aa14.23□□□□□ -0.13
TRGV3-201ENST00000390346 PBRM1Q86U86 1689 aa14.21□□□□□ -0.13
TRGV3-201ENST00000390346 HECW2Q9P2P5 1572 aa14.21□□□□□ -0.14
TRGV3-201ENST00000390346 ABCC10Q5T3U5 1492 aa14.2□□□□□ -0.14
TRGV3-201ENST00000390346 CEP170Q5SW79 1584 aa14.18□□□□□ -0.14
TRGV3-201ENST00000390346 TSPOAP1O95153 1857 aa14.17□□□□□ -0.14
TRGV3-201ENST00000390346 FGD5Q6ZNL6 1462 aa14.16□□□□□ -0.14
TRGV3-201ENST00000390346 DIP2BQ9P265 1576 aa14.14□□□□□ -0.15
TRGV3-201ENST00000390346 SHROOM2Q13796 1616 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms