RNA–Protein interactions for RNA: ENST00000390247.2

IGKV3-7-201, Transcript of immunoglobulin kappa variable 3-7 (non-functional), humanhuman

APPRIS P1 BASIC

Gene IGKV3-7, Length 445 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3-7-201ENST00000390247 NISCHQ9Y2I1 1504 aa16.14■□□□□ 0.17
IGKV3-7-201ENST00000390247 CCDC180Q9P1Z9 1646 aa14.31□□□□□ -0.12
IGKV3-7-201ENST00000390247 ABCC9O60706 1549 aa13.71□□□□□ -0.21
IGKV3-7-201ENST00000390247 ZCCHC6Q5VYS8 1495 aaKnown RBP13.53□□□□□ -0.24
IGKV3-7-201ENST00000390247 AEBP2Q6ZN18 517 aaPredicted RBP13.42□□□□□ -0.26
IGKV3-7-201ENST00000390247 DCAF1Q9Y4B6 1507 aa13.37□□□□□ -0.27
IGKV3-7-201ENST00000390247 NACADO15069 1562 aa13.35□□□□□ -0.27
IGKV3-7-201ENST00000390247 MYO15BQ96JP2 1530 aa13.33□□□□□ -0.28
IGKV3-7-201ENST00000390247 RB1CC1Q8TDY2 1594 aa13.32□□□□□ -0.28
IGKV3-7-201ENST00000390247 DCAF8L2P0C7V8 631 aa13.31□□□□□ -0.28
IGKV3-7-201ENST00000390247 SCRIBQ14160 1630 aa13.07□□□□□ -0.32
IGKV3-7-201ENST00000390247 UNC13AQ9UPW8 1703 aa13.05□□□□□ -0.32
IGKV3-7-201ENST00000390247 BICRAQ9NZM4 1560 aa12.9□□□□□ -0.35
IGKV3-7-201ENST00000390247 SHROOM4Q9ULL8 1493 aa12.89□□□□□ -0.35
IGKV3-7-201ENST00000390247 PABPN1Q86U42 306 aaKnown RBP eCLIP12.79□□□□□ -0.36
IGKV3-7-201ENST00000390247 CHIC1Q5VXU3 224 aa12.54□□□□□ -0.4
IGKV3-7-201ENST00000390247 EIF4G1Q04637 1599 aaKnown RBP12.54□□□□□ -0.4
IGKV3-7-201ENST00000390247 CECR2Q9BXF3 1484 aa12.53□□□□□ -0.4
IGKV3-7-201ENST00000390247 BAZ1AQ9NRL2 1556 aaPredicted RBP12.52□□□□□ -0.41
IGKV3-7-201ENST00000390247 SMARCA4P51532 1647 aa12.51□□□□□ -0.41
IGKV3-7-201ENST00000390247 MROH2BQ7Z745 1585 aa12.45□□□□□ -0.42
IGKV3-7-201ENST00000390247 CC2D2AQ9P2K1 1620 aa12.43□□□□□ -0.42
IGKV3-7-201ENST00000390247 SMARCA2P51531 1590 aa12.37□□□□□ -0.43
IGKV3-7-201ENST00000390247 RSF1Q96T23 1441 aaPredicted RBP12.37□□□□□ -0.43
IGKV3-7-201ENST00000390247 PEG3Q9GZU2 1588 aa12.36□□□□□ -0.43
IGKV3-7-201ENST00000390247 WIZO95785 1651 aa12.35□□□□□ -0.43
IGKV3-7-201ENST00000390247 ATAD2BQ9ULI0 1458 aa12.34□□□□□ -0.43
IGKV3-7-201ENST00000390247 HMGXB3Q12766 1538 aa12.3□□□□□ -0.44
IGKV3-7-201ENST00000390247 NCAPD3P42695 1498 aa12.27□□□□□ -0.44
IGKV3-7-201ENST00000390247 BAZ1BQ9UIG0 1483 aaKnown RBP12.27□□□□□ -0.44
IGKV3-7-201ENST00000390247 DNAJC5BQ9UF47 199 aa12.27□□□□□ -0.45
IGKV3-7-201ENST00000390247 TOP2AP11388 1531 aaKnown RBP12.25□□□□□ -0.45
IGKV3-7-201ENST00000390247 SUPT5HO00267 1087 aaKnown RBP12.21□□□□□ -0.45
IGKV3-7-201ENST00000390247 CCDC88BA6NC98 1476 aa12.05□□□□□ -0.48
IGKV3-7-201ENST00000390247 PRDM2Q13029 1718 aa11.96□□□□□ -0.49
IGKV3-7-201ENST00000390247 LAMC3Q9Y6N6 1575 aa11.96□□□□□ -0.5
IGKV3-7-201ENST00000390247 NESP48681 1621 aa11.93□□□□□ -0.5
IGKV3-7-201ENST00000390247 CFTRP13569 1480 aa11.93□□□□□ -0.5
IGKV3-7-201ENST00000390247 CADPSQ9ULU8 1353 aa11.92□□□□□ -0.5
IGKV3-7-201ENST00000390247 KIF21AQ7Z4S6 1674 aa11.85□□□□□ -0.51
IGKV3-7-201ENST00000390247 PDS5BQ9NTI5 1447 aa11.84□□□□□ -0.51
IGKV3-7-201ENST00000390247 FANCD2Q9BXW9 1451 aa11.83□□□□□ -0.52
IGKV3-7-201ENST00000390247 ERCC6Q03468 1493 aa11.82□□□□□ -0.52
IGKV3-7-201ENST00000390247 CEP164Q9UPV0 1460 aa11.81□□□□□ -0.52
IGKV3-7-201ENST00000390247 THOC2Q8NI27 1593 aaKnown RBP11.75□□□□□ -0.53
IGKV3-7-201ENST00000390247 MRC2Q9UBG0 1479 aa11.74□□□□□ -0.53
IGKV3-7-201ENST00000390247 ABCC8Q09428 1581 aa11.72□□□□□ -0.53
IGKV3-7-201ENST00000390247 DNMBPQ6XZF7 1577 aa11.7□□□□□ -0.54
IGKV3-7-201ENST00000390247 WDR62O43379 1518 aa11.7□□□□□ -0.54
IGKV3-7-201ENST00000390247 URB2Q14146 1524 aaKnown RBP11.7□□□□□ -0.54
IGKV3-7-201ENST00000390247 CUX1P39880 1505 aa11.68□□□□□ -0.54
IGKV3-7-201ENST00000390247 WRNQ14191 1432 aaPredicted RBP eCLIP11.68□□□□□ -0.54
IGKV3-7-201ENST00000390247 TOPBP1Q92547 1522 aa11.67□□□□□ -0.54
IGKV3-7-201ENST00000390247 BIVM-ERCC5R4GMW8 1640 aa11.67□□□□□ -0.54
IGKV3-7-201ENST00000390247 SYNJ1O43426 1573 aa11.67□□□□□ -0.54
IGKV3-7-201ENST00000390247 TOP2BQ02880 1626 aa11.65□□□□□ -0.54
IGKV3-7-201ENST00000390247 FGD5Q6ZNL6 1462 aa11.6□□□□□ -0.55
IGKV3-7-201ENST00000390247 CUX2O14529 1486 aa11.59□□□□□ -0.55
IGKV3-7-201ENST00000390247 POLA1P09884 1462 aaPredicted RBP11.58□□□□□ -0.56
IGKV3-7-201ENST00000390247 DNAJC5Q9H3Z4 198 aa11.57□□□□□ -0.56
IGKV3-7-201ENST00000390247 WDR97A6NE52 1622 aa11.54□□□□□ -0.56
IGKV3-7-201ENST00000390247 TARBP1Q13395 1621 aaKnown RBP11.53□□□□□ -0.56
IGKV3-7-201ENST00000390247 IFT140Q96RY7 1462 aa11.53□□□□□ -0.56
IGKV3-7-201ENST00000390247 RAD54L2Q9Y4B4 1467 aa11.51□□□□□ -0.57
IGKV3-7-201ENST00000390247 TRIM41Q8WV44 630 aa11.51□□□□□ -0.57
IGKV3-7-201ENST00000390247 SOGA1O94964 1423 aa11.51□□□□□ -0.57
IGKV3-7-201ENST00000390247 SENP3Q9H4L4 574 aaPredicted RBP11.5□□□□□ -0.57
IGKV3-7-201ENST00000390247 ABCA10Q8WWZ4 1543 aa11.49□□□□□ -0.57
IGKV3-7-201ENST00000390247 EIF4G3O43432 1585 aaKnown RBP11.47□□□□□ -0.57
IGKV3-7-201ENST00000390247 ABCA5Q8WWZ7 1642 aa11.46□□□□□ -0.57
IGKV3-7-201ENST00000390247 ZNF608Q9ULD9 1512 aaPredicted RBP11.45□□□□□ -0.58
IGKV3-7-201ENST00000390247 PBRM1Q86U86 1689 aa11.43□□□□□ -0.58
IGKV3-7-201ENST00000390247 KIF27Q86VH2 1401 aa11.41□□□□□ -0.58
IGKV3-7-201ENST00000390247 TDRD9Q8NDG6 1382 aaKnown RBP11.41□□□□□ -0.58
IGKV3-7-201ENST00000390247 GAPVD1Q14C86 1478 aa11.4□□□□□ -0.58
IGKV3-7-201ENST00000390247 AQRO60306 1485 aaKnown RBP eCLIP11.39□□□□□ -0.59
IGKV3-7-201ENST00000390247 GRIN2BQ13224 1484 aa11.38□□□□□ -0.59
IGKV3-7-201ENST00000390247 ERICH3Q5RHP9 1530 aa11.36□□□□□ -0.59
IGKV3-7-201ENST00000390247 RUSC2Q8N2Y8 1516 aa11.36□□□□□ -0.59
IGKV3-7-201ENST00000390247 EEA1Q15075 1411 aa11.35□□□□□ -0.59
IGKV3-7-201ENST00000390247 ADAMTS12P58397 1594 aa11.35□□□□□ -0.59
IGKV3-7-201ENST00000390247 CUL7Q14999 1698 aa11.34□□□□□ -0.59
IGKV3-7-201ENST00000390247 SNAPC4Q5SXM2 1469 aa11.34□□□□□ -0.59
IGKV3-7-201ENST00000390247 MAGI1Q96QZ7 1491 aaPredicted RBP11.33□□□□□ -0.6
IGKV3-7-201ENST00000390247 PHF23Q9BUL5 403 aaPredicted RBP11.3□□□□□ -0.6
IGKV3-7-201ENST00000390247 CHD1O14646 1710 aa11.29□□□□□ -0.6
IGKV3-7-201ENST00000390247 IGF1RP08069 1367 aa11.28□□□□□ -0.6
IGKV3-7-201ENST00000390247 FAM9AQ8IZU1 332 aaPredicted RBP11.28□□□□□ -0.6
IGKV3-7-201ENST00000390247 FHAD1B1AJZ9 1412 aa11.27□□□□□ -0.6
IGKV3-7-201ENST00000390247 SYNJ2O15056 1496 aa11.27□□□□□ -0.6
IGKV3-7-201ENST00000390247 KIF21BO75037 1637 aa11.26□□□□□ -0.61
IGKV3-7-201ENST00000390247 CARMIL1Q5VZK9 1371 aa11.25□□□□□ -0.61
IGKV3-7-201ENST00000390247 PRXQ9BXM0 1461 aa11.25□□□□□ -0.61
IGKV3-7-201ENST00000390247 CSRNP3Q8WYN3 585 aa11.24□□□□□ -0.61
IGKV3-7-201ENST00000390247 GRIN2AQ12879 1464 aa11.24□□□□□ -0.61
IGKV3-7-201ENST00000390247 RAPGEF2Q9Y4G8 1499 aa11.23□□□□□ -0.61
IGKV3-7-201ENST00000390247 GOLGA3Q08378 1498 aa11.19□□□□□ -0.62
IGKV3-7-201ENST00000390247 FBLN2P98095 1184 aa11.19□□□□□ -0.62
IGKV3-7-201ENST00000390247 CHMP7Q8WUX9 453 aaPredicted RBP11.19□□□□□ -0.62
IGKV3-7-201ENST00000390247 CTTNBP2Q8WZ74 1663 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms