RNA–Protein interactions for RNA: ENST00000386847.1

SNORA48-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48-201ENST00000386847 NISCHQ9Y2I1 1504 aa23.6■■□□□ 1.37
SNORA48-201ENST00000386847 ABCC9O60706 1549 aa21.21■□□□□ 0.99
SNORA48-201ENST00000386847 CCDC180Q9P1Z9 1646 aa21.2■□□□□ 0.98
SNORA48-201ENST00000386847 RB1CC1Q8TDY2 1594 aa20.24■□□□□ 0.83
SNORA48-201ENST00000386847 NACADO15069 1562 aa20.08■□□□□ 0.81
SNORA48-201ENST00000386847 DCAF8L2P0C7V8 631 aa20.08■□□□□ 0.81
SNORA48-201ENST00000386847 DNAJC5BQ9UF47 199 aa19.79■□□□□ 0.76
SNORA48-201ENST00000386847 MYO15BQ96JP2 1530 aa19.78■□□□□ 0.76
SNORA48-201ENST00000386847 PABPN1Q86U42 306 aaKnown RBP eCLIP19.76■□□□□ 0.75
SNORA48-201ENST00000386847 UNC13AQ9UPW8 1703 aa19.62■□□□□ 0.73
SNORA48-201ENST00000386847 ZCCHC6Q5VYS8 1495 aaKnown RBP19.54■□□□□ 0.72
SNORA48-201ENST00000386847 DCAF1Q9Y4B6 1507 aa19.51■□□□□ 0.71
SNORA48-201ENST00000386847 BICRAQ9NZM4 1560 aa19.49■□□□□ 0.71
SNORA48-201ENST00000386847 SHROOM4Q9ULL8 1493 aa19.4■□□□□ 0.7
SNORA48-201ENST00000386847 SCRIBQ14160 1630 aa19.32■□□□□ 0.68
SNORA48-201ENST00000386847 CC2D2AQ9P2K1 1620 aa19.14■□□□□ 0.66
SNORA48-201ENST00000386847 CECR2Q9BXF3 1484 aa19.14■□□□□ 0.65
SNORA48-201ENST00000386847 EIF4G1Q04637 1599 aaKnown RBP19.1■□□□□ 0.65
SNORA48-201ENST00000386847 NCAPD3P42695 1498 aa18.51■□□□□ 0.55
SNORA48-201ENST00000386847 SMARCA2P51531 1590 aa18.45■□□□□ 0.54
SNORA48-201ENST00000386847 ATAD2BQ9ULI0 1458 aa18.44■□□□□ 0.54
SNORA48-201ENST00000386847 ERCC6Q03468 1493 aa18.42■□□□□ 0.54
SNORA48-201ENST00000386847 SMARCA4P51532 1647 aa18.41■□□□□ 0.54
SNORA48-201ENST00000386847 BAZ1AQ9NRL2 1556 aaPredicted RBP18.38■□□□□ 0.53
SNORA48-201ENST00000386847 HMGXB3Q12766 1538 aa18.38■□□□□ 0.53
SNORA48-201ENST00000386847 CUX2O14529 1486 aa18.33■□□□□ 0.53
SNORA48-201ENST00000386847 BAZ1BQ9UIG0 1483 aaKnown RBP18.33■□□□□ 0.52
SNORA48-201ENST00000386847 DNAJC5Q9H3Z4 198 aa18.3■□□□□ 0.52
SNORA48-201ENST00000386847 PEG3Q9GZU2 1588 aa18.21■□□□□ 0.51
SNORA48-201ENST00000386847 NESP48681 1621 aa18.16■□□□□ 0.5
SNORA48-201ENST00000386847 MROH2BQ7Z745 1585 aa18.15■□□□□ 0.5
SNORA48-201ENST00000386847 LAMC3Q9Y6N6 1575 aa18.13■□□□□ 0.49
SNORA48-201ENST00000386847 PDS5BQ9NTI5 1447 aa18.08■□□□□ 0.49
SNORA48-201ENST00000386847 CADPSQ9ULU8 1353 aa17.98■□□□□ 0.47
SNORA48-201ENST00000386847 THOC2Q8NI27 1593 aaKnown RBP17.98■□□□□ 0.47
SNORA48-201ENST00000386847 WIZO95785 1651 aa17.93■□□□□ 0.46
SNORA48-201ENST00000386847 KIF21AQ7Z4S6 1674 aa17.93■□□□□ 0.46
SNORA48-201ENST00000386847 MRC2Q9UBG0 1479 aa17.87■□□□□ 0.45
SNORA48-201ENST00000386847 CEP164Q9UPV0 1460 aa17.82■□□□□ 0.44
SNORA48-201ENST00000386847 RSF1Q96T23 1441 aaPredicted RBP17.8■□□□□ 0.44
SNORA48-201ENST00000386847 WDR62O43379 1518 aa17.78■□□□□ 0.44
SNORA48-201ENST00000386847 FANCD2Q9BXW9 1451 aa17.77■□□□□ 0.44
SNORA48-201ENST00000386847 TOP2AP11388 1531 aaKnown RBP17.76■□□□□ 0.43
SNORA48-201ENST00000386847 CFTRP13569 1480 aa17.74■□□□□ 0.43
SNORA48-201ENST00000386847 TRIM41Q8WV44 630 aa17.56■□□□□ 0.4
SNORA48-201ENST00000386847 URB2Q14146 1524 aaKnown RBP17.56■□□□□ 0.4
SNORA48-201ENST00000386847 OSCARQ8IYS5 282 aa17.54■□□□□ 0.4
SNORA48-201ENST00000386847 CCDC88BA6NC98 1476 aa17.54■□□□□ 0.4
SNORA48-201ENST00000386847 PRDM2Q13029 1718 aa17.52■□□□□ 0.4
SNORA48-201ENST00000386847 ABCC8Q09428 1581 aa17.47■□□□□ 0.39
SNORA48-201ENST00000386847 IFT140Q96RY7 1462 aa17.46■□□□□ 0.39
SNORA48-201ENST00000386847 TOPBP1Q92547 1522 aa17.4■□□□□ 0.38
SNORA48-201ENST00000386847 DNMBPQ6XZF7 1577 aa17.36■□□□□ 0.37
SNORA48-201ENST00000386847 ZNF608Q9ULD9 1512 aaPredicted RBP17.34■□□□□ 0.37
SNORA48-201ENST00000386847 EIF4G3O43432 1585 aaKnown RBP17.28■□□□□ 0.36
SNORA48-201ENST00000386847 FBLN2P98095 1184 aa17.24■□□□□ 0.35
SNORA48-201ENST00000386847 AQRO60306 1485 aaKnown RBP eCLIP17.22■□□□□ 0.35
SNORA48-201ENST00000386847 POLA1P09884 1462 aaPredicted RBP17.22■□□□□ 0.35
SNORA48-201ENST00000386847 RIMBP3CA6NJZ7 1639 aa17.2■□□□□ 0.34
SNORA48-201ENST00000386847 RIMBP3BA6NNM3 1639 aa17.2■□□□□ 0.34
SNORA48-201ENST00000386847 TARBP1Q13395 1621 aaKnown RBP17.2■□□□□ 0.34
SNORA48-201ENST00000386847 RIMBP3Q9UFD9 1639 aa17.2■□□□□ 0.34
SNORA48-201ENST00000386847 SOGA1O94964 1423 aa17.2■□□□□ 0.34
SNORA48-201ENST00000386847 ARHGEF11O15085 1522 aa17.17■□□□□ 0.34
SNORA48-201ENST00000386847 RAD54L2Q9Y4B4 1467 aa17.14■□□□□ 0.33
SNORA48-201ENST00000386847 TDRD9Q8NDG6 1382 aaKnown RBP17.14■□□□□ 0.33
SNORA48-201ENST00000386847 WDR97A6NE52 1622 aa17.13■□□□□ 0.33
SNORA48-201ENST00000386847 FGD5Q6ZNL6 1462 aa17.12■□□□□ 0.33
SNORA48-201ENST00000386847 CHD1O14646 1710 aa17.12■□□□□ 0.33
SNORA48-201ENST00000386847 SUPT5HO00267 1087 aaKnown RBP17.11■□□□□ 0.33
SNORA48-201ENST00000386847 CYB5RLQ6IPT4 315 aa17.11■□□□□ 0.33
SNORA48-201ENST00000386847 CHMP7Q8WUX9 453 aaPredicted RBP17.1■□□□□ 0.33
SNORA48-201ENST00000386847 CUX1P39880 1505 aa17.06■□□□□ 0.32
SNORA48-201ENST00000386847 SNAPC4Q5SXM2 1469 aa17.06■□□□□ 0.32
SNORA48-201ENST00000386847 GRIN2BQ13224 1484 aa17.05■□□□□ 0.32
SNORA48-201ENST00000386847 MAGI1Q96QZ7 1491 aaPredicted RBP17.05■□□□□ 0.32
SNORA48-201ENST00000386847 SYNJ1O43426 1573 aa17.02■□□□□ 0.32
SNORA48-201ENST00000386847 TRHP20396 242 aaPredicted RBP17■□□□□ 0.31
SNORA48-201ENST00000386847 SYNJ2O15056 1496 aa16.99■□□□□ 0.31
SNORA48-201ENST00000386847 GAPVD1Q14C86 1478 aa16.99■□□□□ 0.31
SNORA48-201ENST00000386847 ARAP1Q96P48 1450 aa16.97■□□□□ 0.31
SNORA48-201ENST00000386847 ABCA10Q8WWZ4 1543 aa16.93■□□□□ 0.3
SNORA48-201ENST00000386847 WRNQ14191 1432 aaPredicted RBP eCLIP16.93■□□□□ 0.3
SNORA48-201ENST00000386847 CLASP1Q7Z460 1538 aa16.92■□□□□ 0.3
SNORA48-201ENST00000386847 PBRM1Q86U86 1689 aa16.91■□□□□ 0.3
SNORA48-201ENST00000386847 ABCA5Q8WWZ7 1642 aa16.87■□□□□ 0.29
SNORA48-201ENST00000386847 TOP2BQ02880 1626 aa16.82■□□□□ 0.28
SNORA48-201ENST00000386847 GRIN2AQ12879 1464 aa16.8■□□□□ 0.28
SNORA48-201ENST00000386847 BIVM-ERCC5R4GMW8 1640 aa16.8■□□□□ 0.28
SNORA48-201ENST00000386847 FHAD1B1AJZ9 1412 aa16.78■□□□□ 0.28
SNORA48-201ENST00000386847 ADAMTS12P58397 1594 aa16.77■□□□□ 0.27
SNORA48-201ENST00000386847 ERICH3Q5RHP9 1530 aa16.75■□□□□ 0.27
SNORA48-201ENST00000386847 NUP160Q12769 1436 aa16.72■□□□□ 0.27
SNORA48-201ENST00000386847 CEP170Q5SW79 1584 aa16.68■□□□□ 0.26
SNORA48-201ENST00000386847 ERCC6L2Q5T890 1561 aa16.61■□□□□ 0.25
SNORA48-201ENST00000386847 SHROOM2Q13796 1616 aa16.61■□□□□ 0.25
SNORA48-201ENST00000386847 JPH4Q96JJ6 628 aa16.61■□□□□ 0.25
SNORA48-201ENST00000386847 PRG4Q92954 1404 aaPredicted RBP16.61■□□□□ 0.25
SNORA48-201ENST00000386847 NPM1P06748 294 aaKnown RBP eCLIP16.59■□□□□ 0.25
SNORA48-201ENST00000386847 KIF27Q86VH2 1401 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms