RNA–Protein interactions for RNA: ENST00000382275.5

CDH18-202, Transcript of cadherin 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH18, Length 3,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH18-202ENST00000382275 NISCHQ9Y2I1 1504 aa23.94■■□□□ 1.42
CDH18-202ENST00000382275 CCDC180Q9P1Z9 1646 aa21.34■■□□□ 1.01
CDH18-202ENST00000382275 ABCC9O60706 1549 aa20.17■□□□□ 0.82
CDH18-202ENST00000382275 MYO15BQ96JP2 1530 aa20.07■□□□□ 0.8
CDH18-202ENST00000382275 ZCCHC6Q5VYS8 1495 aaKnown RBP20.05■□□□□ 0.8
CDH18-202ENST00000382275 DCAF1Q9Y4B6 1507 aa20.04■□□□□ 0.8
CDH18-202ENST00000382275 NACADO15069 1562 aa19.92■□□□□ 0.78
CDH18-202ENST00000382275 RB1CC1Q8TDY2 1594 aa19.81■□□□□ 0.76
CDH18-202ENST00000382275 UNC13AQ9UPW8 1703 aa19.35■□□□□ 0.69
CDH18-202ENST00000382275 DCAF8L2P0C7V8 631 aa19.33■□□□□ 0.69
CDH18-202ENST00000382275 SHROOM4Q9ULL8 1493 aa19.27■□□□□ 0.68
CDH18-202ENST00000382275 BICRAQ9NZM4 1560 aa19.19■□□□□ 0.66
CDH18-202ENST00000382275 SCRIBQ14160 1630 aa19.16■□□□□ 0.66
CDH18-202ENST00000382275 PABPN1Q86U42 306 aaKnown RBP eCLIP18.77■□□□□ 0.6
CDH18-202ENST00000382275 EIF4G1Q04637 1599 aaKnown RBP18.61■□□□□ 0.57
CDH18-202ENST00000382275 BAZ1AQ9NRL2 1556 aaPredicted RBP18.56■□□□□ 0.56
CDH18-202ENST00000382275 SMARCA4P51532 1647 aa18.52■□□□□ 0.55
CDH18-202ENST00000382275 PEG3Q9GZU2 1588 aa18.5■□□□□ 0.55
CDH18-202ENST00000382275 CECR2Q9BXF3 1484 aa18.46■□□□□ 0.55
CDH18-202ENST00000382275 CC2D2AQ9P2K1 1620 aa18.43■□□□□ 0.54
CDH18-202ENST00000382275 SMARCA2P51531 1590 aa18.38■□□□□ 0.53
CDH18-202ENST00000382275 MROH2BQ7Z745 1585 aa18.36■□□□□ 0.53
CDH18-202ENST00000382275 NCAPD3P42695 1498 aa18.34■□□□□ 0.53
CDH18-202ENST00000382275 HMGXB3Q12766 1538 aa18.33■□□□□ 0.53
CDH18-202ENST00000382275 ATAD2BQ9ULI0 1458 aa18.31■□□□□ 0.52
CDH18-202ENST00000382275 RSF1Q96T23 1441 aaPredicted RBP18.27■□□□□ 0.52
CDH18-202ENST00000382275 DNAJC5BQ9UF47 199 aa18.21■□□□□ 0.51
CDH18-202ENST00000382275 WIZO95785 1651 aa18.16■□□□□ 0.5
CDH18-202ENST00000382275 BAZ1BQ9UIG0 1483 aaKnown RBP18.12■□□□□ 0.49
CDH18-202ENST00000382275 TOP2AP11388 1531 aaKnown RBP18.12■□□□□ 0.49
CDH18-202ENST00000382275 LAMC3Q9Y6N6 1575 aa17.82■□□□□ 0.44
CDH18-202ENST00000382275 CCDC88BA6NC98 1476 aa17.8■□□□□ 0.44
CDH18-202ENST00000382275 PRDM2Q13029 1718 aa17.76■□□□□ 0.43
CDH18-202ENST00000382275 CFTRP13569 1480 aa17.75■□□□□ 0.43
CDH18-202ENST00000382275 CADPSQ9ULU8 1353 aa17.72■□□□□ 0.43
CDH18-202ENST00000382275 SUPT5HO00267 1087 aaKnown RBP17.64■□□□□ 0.41
CDH18-202ENST00000382275 PDS5BQ9NTI5 1447 aa17.59■□□□□ 0.41
CDH18-202ENST00000382275 NESP48681 1621 aa17.56■□□□□ 0.4
CDH18-202ENST00000382275 KIF21AQ7Z4S6 1674 aa17.5■□□□□ 0.39
CDH18-202ENST00000382275 FANCD2Q9BXW9 1451 aa17.48■□□□□ 0.39
CDH18-202ENST00000382275 THOC2Q8NI27 1593 aaKnown RBP17.46■□□□□ 0.39
CDH18-202ENST00000382275 CEP164Q9UPV0 1460 aa17.45■□□□□ 0.38
CDH18-202ENST00000382275 ABCC8Q09428 1581 aa17.42■□□□□ 0.38
CDH18-202ENST00000382275 WDR62O43379 1518 aa17.42■□□□□ 0.38
CDH18-202ENST00000382275 MRC2Q9UBG0 1479 aa17.41■□□□□ 0.38
CDH18-202ENST00000382275 ERCC6Q03468 1493 aa17.39■□□□□ 0.38
CDH18-202ENST00000382275 CUX2O14529 1486 aa17.36■□□□□ 0.37
CDH18-202ENST00000382275 DNMBPQ6XZF7 1577 aa17.34■□□□□ 0.37
CDH18-202ENST00000382275 URB2Q14146 1524 aaKnown RBP17.31■□□□□ 0.36
CDH18-202ENST00000382275 BIVM-ERCC5R4GMW8 1640 aa17.29■□□□□ 0.36
CDH18-202ENST00000382275 TOPBP1Q92547 1522 aa17.27■□□□□ 0.36
CDH18-202ENST00000382275 TOP2BQ02880 1626 aa17.25■□□□□ 0.35
CDH18-202ENST00000382275 CUX1P39880 1505 aa17.24■□□□□ 0.35
CDH18-202ENST00000382275 WDR97A6NE52 1622 aa17.22■□□□□ 0.35
CDH18-202ENST00000382275 WRNQ14191 1432 aaPredicted RBP eCLIP17.19■□□□□ 0.34
CDH18-202ENST00000382275 SYNJ1O43426 1573 aa17.16■□□□□ 0.34
CDH18-202ENST00000382275 IFT140Q96RY7 1462 aa17.14■□□□□ 0.33
CDH18-202ENST00000382275 TARBP1Q13395 1621 aaKnown RBP17.13■□□□□ 0.33
CDH18-202ENST00000382275 POLA1P09884 1462 aaPredicted RBP17.12■□□□□ 0.33
CDH18-202ENST00000382275 FGD5Q6ZNL6 1462 aa17.09■□□□□ 0.33
CDH18-202ENST00000382275 ABCA10Q8WWZ4 1543 aa17.06■□□□□ 0.32
CDH18-202ENST00000382275 SOGA1O94964 1423 aa17.01■□□□□ 0.31
CDH18-202ENST00000382275 ABCA5Q8WWZ7 1642 aa16.99■□□□□ 0.31
CDH18-202ENST00000382275 EIF4G3O43432 1585 aaKnown RBP16.94■□□□□ 0.3
CDH18-202ENST00000382275 RAD54L2Q9Y4B4 1467 aa16.93■□□□□ 0.3
CDH18-202ENST00000382275 ERICH3Q5RHP9 1530 aa16.9■□□□□ 0.3
CDH18-202ENST00000382275 PBRM1Q86U86 1689 aa16.88■□□□□ 0.29
CDH18-202ENST00000382275 ZNF608Q9ULD9 1512 aaPredicted RBP16.88■□□□□ 0.29
CDH18-202ENST00000382275 GRIN2BQ13224 1484 aa16.86■□□□□ 0.29
CDH18-202ENST00000382275 GAPVD1Q14C86 1478 aa16.85■□□□□ 0.29
CDH18-202ENST00000382275 MAGI1Q96QZ7 1491 aaPredicted RBP16.84■□□□□ 0.29
CDH18-202ENST00000382275 CHIC1Q5VXU3 224 aa16.84■□□□□ 0.29
CDH18-202ENST00000382275 EEA1Q15075 1411 aa16.84■□□□□ 0.29
CDH18-202ENST00000382275 KIF27Q86VH2 1401 aa16.83■□□□□ 0.29
CDH18-202ENST00000382275 CUL7Q14999 1698 aa16.81■□□□□ 0.28
CDH18-202ENST00000382275 TRIM41Q8WV44 630 aa16.8■□□□□ 0.28
CDH18-202ENST00000382275 AQRO60306 1485 aaKnown RBP eCLIP16.79■□□□□ 0.28
CDH18-202ENST00000382275 ADAMTS12P58397 1594 aa16.77■□□□□ 0.28
CDH18-202ENST00000382275 TDRD9Q8NDG6 1382 aaKnown RBP16.76■□□□□ 0.27
CDH18-202ENST00000382275 FHAD1B1AJZ9 1412 aa16.72■□□□□ 0.27
CDH18-202ENST00000382275 SYNJ2O15056 1496 aa16.72■□□□□ 0.27
CDH18-202ENST00000382275 IGF1RP08069 1367 aa16.72■□□□□ 0.27
CDH18-202ENST00000382275 SNAPC4Q5SXM2 1469 aa16.72■□□□□ 0.27
CDH18-202ENST00000382275 PRXQ9BXM0 1461 aa16.66■□□□□ 0.26
CDH18-202ENST00000382275 CHD1O14646 1710 aa16.65■□□□□ 0.26
CDH18-202ENST00000382275 RUSC2Q8N2Y8 1516 aa16.63■□□□□ 0.25
CDH18-202ENST00000382275 KIF21BO75037 1637 aa16.63■□□□□ 0.25
CDH18-202ENST00000382275 GRIN2AQ12879 1464 aa16.62■□□□□ 0.25
CDH18-202ENST00000382275 NUP160Q12769 1436 aa16.61■□□□□ 0.25
CDH18-202ENST00000382275 CARMIL1Q5VZK9 1371 aa16.59■□□□□ 0.25
CDH18-202ENST00000382275 RAPGEF2Q9Y4G8 1499 aa16.59■□□□□ 0.25
CDH18-202ENST00000382275 CLASP1Q7Z460 1538 aa16.58■□□□□ 0.25
CDH18-202ENST00000382275 CSRNP3Q8WYN3 585 aa16.54■□□□□ 0.24
CDH18-202ENST00000382275 CEP170Q5SW79 1584 aa16.53■□□□□ 0.24
CDH18-202ENST00000382275 SHROOM2Q13796 1616 aa16.53■□□□□ 0.24
CDH18-202ENST00000382275 CTTNBP2Q8WZ74 1663 aa16.49■□□□□ 0.23
CDH18-202ENST00000382275 KIAA0586Q9BVV6 1533 aa16.49■□□□□ 0.23
CDH18-202ENST00000382275 CHMP7Q8WUX9 453 aaPredicted RBP16.49■□□□□ 0.23
CDH18-202ENST00000382275 OSCARQ8IYS5 282 aa16.47■□□□□ 0.23
CDH18-202ENST00000382275 GOLGA3Q08378 1498 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms