RNA–Protein interactions for RNA: ENST00000382133.8

PCOTH-201, Transcript of Pro-X-Gly collagen triple helix like repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOTH, Length 805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOTH-201ENST00000382133 NISCHQ9Y2I1 1504 aa20.25■□□□□ 0.83
PCOTH-201ENST00000382133 ABCC9O60706 1549 aa18.44■□□□□ 0.54
PCOTH-201ENST00000382133 CCDC180Q9P1Z9 1646 aa18.2■□□□□ 0.5
PCOTH-201ENST00000382133 DNAJC5BQ9UF47 199 aa17.53■□□□□ 0.4
PCOTH-201ENST00000382133 RB1CC1Q8TDY2 1594 aa17.48■□□□□ 0.39
PCOTH-201ENST00000382133 NACADO15069 1562 aa17.33■□□□□ 0.37
PCOTH-201ENST00000382133 DCAF8L2P0C7V8 631 aa17.17■□□□□ 0.34
PCOTH-201ENST00000382133 PABPN1Q86U42 306 aaKnown RBP eCLIP17.16■□□□□ 0.34
PCOTH-201ENST00000382133 MYO15BQ96JP2 1530 aa17.09■□□□□ 0.33
PCOTH-201ENST00000382133 BICRAQ9NZM4 1560 aa16.94■□□□□ 0.3
PCOTH-201ENST00000382133 UNC13AQ9UPW8 1703 aa16.9■□□□□ 0.3
PCOTH-201ENST00000382133 SHROOM4Q9ULL8 1493 aa16.82■□□□□ 0.28
PCOTH-201ENST00000382133 DCAF1Q9Y4B6 1507 aa16.75■□□□□ 0.27
PCOTH-201ENST00000382133 ZCCHC6Q5VYS8 1495 aaKnown RBP16.73■□□□□ 0.27
PCOTH-201ENST00000382133 CECR2Q9BXF3 1484 aa16.67■□□□□ 0.26
PCOTH-201ENST00000382133 CC2D2AQ9P2K1 1620 aa16.63■□□□□ 0.25
PCOTH-201ENST00000382133 EIF4G1Q04637 1599 aaKnown RBP16.57■□□□□ 0.24
PCOTH-201ENST00000382133 SCRIBQ14160 1630 aa16.53■□□□□ 0.24
PCOTH-201ENST00000382133 DNAJC5Q9H3Z4 198 aa16.33■□□□□ 0.2
PCOTH-201ENST00000382133 CUX2O14529 1486 aa16.05■□□□□ 0.16
PCOTH-201ENST00000382133 NCAPD3P42695 1498 aa16.05■□□□□ 0.16
PCOTH-201ENST00000382133 ERCC6Q03468 1493 aa15.97■□□□□ 0.15
PCOTH-201ENST00000382133 ATAD2BQ9ULI0 1458 aa15.93■□□□□ 0.14
PCOTH-201ENST00000382133 SMARCA2P51531 1590 aa15.87■□□□□ 0.13
PCOTH-201ENST00000382133 HMGXB3Q12766 1538 aa15.86■□□□□ 0.13
PCOTH-201ENST00000382133 SMARCA4P51532 1647 aa15.79■□□□□ 0.12
PCOTH-201ENST00000382133 NESP48681 1621 aa15.76■□□□□ 0.11
PCOTH-201ENST00000382133 BAZ1BQ9UIG0 1483 aaKnown RBP15.74■□□□□ 0.11
PCOTH-201ENST00000382133 BAZ1AQ9NRL2 1556 aaPredicted RBP15.73■□□□□ 0.11
PCOTH-201ENST00000382133 PEG3Q9GZU2 1588 aa15.7■□□□□ 0.1
PCOTH-201ENST00000382133 LAMC3Q9Y6N6 1575 aa15.66■□□□□ 0.1
PCOTH-201ENST00000382133 PDS5BQ9NTI5 1447 aa15.64■□□□□ 0.09
PCOTH-201ENST00000382133 THOC2Q8NI27 1593 aaKnown RBP15.63■□□□□ 0.09
PCOTH-201ENST00000382133 MROH2BQ7Z745 1585 aa15.56■□□□□ 0.08
PCOTH-201ENST00000382133 CADPSQ9ULU8 1353 aa15.54■□□□□ 0.08
PCOTH-201ENST00000382133 MRC2Q9UBG0 1479 aa15.46■□□□□ 0.07
PCOTH-201ENST00000382133 KIF21AQ7Z4S6 1674 aa15.46■□□□□ 0.07
PCOTH-201ENST00000382133 TRIM41Q8WV44 630 aa15.44■□□□□ 0.06
PCOTH-201ENST00000382133 WDR62O43379 1518 aa15.43■□□□□ 0.06
PCOTH-201ENST00000382133 CEP164Q9UPV0 1460 aa15.35■□□□□ 0.05
PCOTH-201ENST00000382133 FANCD2Q9BXW9 1451 aa15.33■□□□□ 0.04
PCOTH-201ENST00000382133 OSCARQ8IYS5 282 aa15.31■□□□□ 0.04
PCOTH-201ENST00000382133 CFTRP13569 1480 aa15.31■□□□□ 0.04
PCOTH-201ENST00000382133 WIZO95785 1651 aa15.3■□□□□ 0.04
PCOTH-201ENST00000382133 RSF1Q96T23 1441 aaPredicted RBP15.21■□□□□ 0.03
PCOTH-201ENST00000382133 URB2Q14146 1524 aaKnown RBP15.18■□□□□ 0.02
PCOTH-201ENST00000382133 TOP2AP11388 1531 aaKnown RBP15.17■□□□□ 0.02
PCOTH-201ENST00000382133 IFT140Q96RY7 1462 aa15.08■□□□□ 0.01
PCOTH-201ENST00000382133 ZNF608Q9ULD9 1512 aaPredicted RBP15.03■□□□□ -0
PCOTH-201ENST00000382133 CCDC88BA6NC98 1476 aa15.01□□□□□ -0.01
PCOTH-201ENST00000382133 RIMBP3CA6NJZ7 1639 aa15.01□□□□□ -0.01
PCOTH-201ENST00000382133 RIMBP3BA6NNM3 1639 aa15.01□□□□□ -0.01
PCOTH-201ENST00000382133 RIMBP3Q9UFD9 1639 aa15.01□□□□□ -0.01
PCOTH-201ENST00000382133 ABCC8Q09428 1581 aa15.01□□□□□ -0.01
PCOTH-201ENST00000382133 ARHGEF11O15085 1522 aa14.99□□□□□ -0.01
PCOTH-201ENST00000382133 TOPBP1Q92547 1522 aa14.99□□□□□ -0.01
PCOTH-201ENST00000382133 PRDM2Q13029 1718 aa14.94□□□□□ -0.02
PCOTH-201ENST00000382133 CYB5RLQ6IPT4 315 aa14.93□□□□□ -0.02
PCOTH-201ENST00000382133 EIF4G3O43432 1585 aaKnown RBP14.9□□□□□ -0.02
PCOTH-201ENST00000382133 DNMBPQ6XZF7 1577 aa14.9□□□□□ -0.02
PCOTH-201ENST00000382133 AQRO60306 1485 aaKnown RBP eCLIP14.89□□□□□ -0.03
PCOTH-201ENST00000382133 TARBP1Q13395 1621 aaKnown RBP14.84□□□□□ -0.03
PCOTH-201ENST00000382133 FBLN2P98095 1184 aa14.84□□□□□ -0.03
PCOTH-201ENST00000382133 POLA1P09884 1462 aaPredicted RBP14.83□□□□□ -0.03
PCOTH-201ENST00000382133 ARAP1Q96P48 1450 aa14.82□□□□□ -0.04
PCOTH-201ENST00000382133 TRHP20396 242 aaPredicted RBP14.82□□□□□ -0.04
PCOTH-201ENST00000382133 SOGA1O94964 1423 aa14.79□□□□□ -0.04
PCOTH-201ENST00000382133 TDRD9Q8NDG6 1382 aaKnown RBP14.77□□□□□ -0.04
PCOTH-201ENST00000382133 RAD54L2Q9Y4B4 1467 aa14.76□□□□□ -0.05
PCOTH-201ENST00000382133 CHD1O14646 1710 aa14.75□□□□□ -0.05
PCOTH-201ENST00000382133 WDR97A6NE52 1622 aa14.74□□□□□ -0.05
PCOTH-201ENST00000382133 CHMP7Q8WUX9 453 aaPredicted RBP14.73□□□□□ -0.05
PCOTH-201ENST00000382133 SNAPC4Q5SXM2 1469 aa14.71□□□□□ -0.05
PCOTH-201ENST00000382133 MAGI1Q96QZ7 1491 aaPredicted RBP14.71□□□□□ -0.05
PCOTH-201ENST00000382133 CLASP1Q7Z460 1538 aa14.7□□□□□ -0.06
PCOTH-201ENST00000382133 FGD5Q6ZNL6 1462 aa14.69□□□□□ -0.06
PCOTH-201ENST00000382133 GRIN2BQ13224 1484 aa14.69□□□□□ -0.06
PCOTH-201ENST00000382133 SYNJ1O43426 1573 aa14.67□□□□□ -0.06
PCOTH-201ENST00000382133 SYNJ2O15056 1496 aa14.66□□□□□ -0.06
PCOTH-201ENST00000382133 CUX1P39880 1505 aa14.63□□□□□ -0.07
PCOTH-201ENST00000382133 GAPVD1Q14C86 1478 aa14.59□□□□□ -0.07
PCOTH-201ENST00000382133 AEBP2Q6ZN18 517 aaPredicted RBP14.57□□□□□ -0.08
PCOTH-201ENST00000382133 ABCA10Q8WWZ4 1543 aa14.56□□□□□ -0.08
PCOTH-201ENST00000382133 ABCA5Q8WWZ7 1642 aa14.48□□□□□ -0.09
PCOTH-201ENST00000382133 GRIN2AQ12879 1464 aa14.48□□□□□ -0.09
PCOTH-201ENST00000382133 WRNQ14191 1432 aaPredicted RBP eCLIP14.48□□□□□ -0.09
PCOTH-201ENST00000382133 NUP160Q12769 1436 aa14.47□□□□□ -0.09
PCOTH-201ENST00000382133 PBRM1Q86U86 1689 aa14.46□□□□□ -0.09
PCOTH-201ENST00000382133 FHAD1B1AJZ9 1412 aa14.42□□□□□ -0.1
PCOTH-201ENST00000382133 CEP170Q5SW79 1584 aa14.4□□□□□ -0.1
PCOTH-201ENST00000382133 ERCC6L2Q5T890 1561 aa14.4□□□□□ -0.1
PCOTH-201ENST00000382133 ADAMTS12P58397 1594 aa14.39□□□□□ -0.11
PCOTH-201ENST00000382133 ERICH3Q5RHP9 1530 aa14.36□□□□□ -0.11
PCOTH-201ENST00000382133 SHROOM2Q13796 1616 aa14.36□□□□□ -0.11
PCOTH-201ENST00000382133 TOP2BQ02880 1626 aa14.33□□□□□ -0.11
PCOTH-201ENST00000382133 JPH4Q96JJ6 628 aa14.33□□□□□ -0.12
PCOTH-201ENST00000382133 PRG4Q92954 1404 aaPredicted RBP14.32□□□□□ -0.12
PCOTH-201ENST00000382133 SUPT5HO00267 1087 aaKnown RBP14.32□□□□□ -0.12
PCOTH-201ENST00000382133 BIVM-ERCC5R4GMW8 1640 aa14.3□□□□□ -0.12
PCOTH-201ENST00000382133 NPM1P06748 294 aaKnown RBP eCLIP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms