RNA–Protein interactions for RNA: ENST00000381730.5

RCL1-202, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 3 BASIC

Gene RCL1, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-202ENST00000381730 NISCHQ9Y2I1 1504 aa26.42■■□□□ 1.82
RCL1-202ENST00000381730 CCDC180Q9P1Z9 1646 aa23.48■■□□□ 1.35
RCL1-202ENST00000381730 ABCC9O60706 1549 aa23.2■■□□□ 1.3
RCL1-202ENST00000381730 CHIC1Q5VXU3 224 aa22.8■■□□□ 1.24
RCL1-202ENST00000381730 AEBP2Q6ZN18 517 aaPredicted RBP22.49■■□□□ 1.19
RCL1-202ENST00000381730 DCAF8L2P0C7V8 631 aa22.23■■□□□ 1.15
RCL1-202ENST00000381730 RB1CC1Q8TDY2 1594 aa22.2■■□□□ 1.14
RCL1-202ENST00000381730 NACADO15069 1562 aa22.15■■□□□ 1.14
RCL1-202ENST00000381730 ZCCHC6Q5VYS8 1495 aaKnown RBP21.96■■□□□ 1.11
RCL1-202ENST00000381730 MYO15BQ96JP2 1530 aa21.96■■□□□ 1.11
RCL1-202ENST00000381730 DCAF1Q9Y4B6 1507 aa21.84■■□□□ 1.09
RCL1-202ENST00000381730 DNAJC5BQ9UF47 199 aa21.66■■□□□ 1.06
RCL1-202ENST00000381730 UNC13AQ9UPW8 1703 aa21.64■■□□□ 1.06
RCL1-202ENST00000381730 PABPN1Q86U42 306 aaKnown RBP eCLIP21.64■■□□□ 1.05
RCL1-202ENST00000381730 BICRAQ9NZM4 1560 aa21.58■■□□□ 1.05
RCL1-202ENST00000381730 SCRIBQ14160 1630 aa21.45■■□□□ 1.02
RCL1-202ENST00000381730 SHROOM4Q9ULL8 1493 aa21.34■■□□□ 1.01
RCL1-202ENST00000381730 EIF4G1Q04637 1599 aaKnown RBP21.01■□□□□ 0.95
RCL1-202ENST00000381730 CC2D2AQ9P2K1 1620 aa20.98■□□□□ 0.95
RCL1-202ENST00000381730 CECR2Q9BXF3 1484 aa20.9■□□□□ 0.94
RCL1-202ENST00000381730 SMARCA4P51532 1647 aa20.5■□□□□ 0.87
RCL1-202ENST00000381730 BAZ1AQ9NRL2 1556 aaPredicted RBP20.49■□□□□ 0.87
RCL1-202ENST00000381730 NCAPD3P42695 1498 aa20.45■□□□□ 0.86
RCL1-202ENST00000381730 ATAD2BQ9ULI0 1458 aa20.44■□□□□ 0.86
RCL1-202ENST00000381730 SMARCA2P51531 1590 aa20.41■□□□□ 0.86
RCL1-202ENST00000381730 MROH2BQ7Z745 1585 aa20.35■□□□□ 0.85
RCL1-202ENST00000381730 HMGXB3Q12766 1538 aa20.31■□□□□ 0.84
RCL1-202ENST00000381730 PEG3Q9GZU2 1588 aa20.29■□□□□ 0.84
RCL1-202ENST00000381730 BAZ1BQ9UIG0 1483 aaKnown RBP20.28■□□□□ 0.84
RCL1-202ENST00000381730 PHF23Q9BUL5 403 aaPredicted RBP20.18■□□□□ 0.82
RCL1-202ENST00000381730 WIZO95785 1651 aa20.13■□□□□ 0.81
RCL1-202ENST00000381730 RSF1Q96T23 1441 aaPredicted RBP20.1■□□□□ 0.81
RCL1-202ENST00000381730 NESP48681 1621 aa20■□□□□ 0.79
RCL1-202ENST00000381730 ERCC6Q03468 1493 aa19.99■□□□□ 0.79
RCL1-202ENST00000381730 CUX2O14529 1486 aa19.99■□□□□ 0.79
RCL1-202ENST00000381730 LAMC3Q9Y6N6 1575 aa19.91■□□□□ 0.78
RCL1-202ENST00000381730 TOP2AP11388 1531 aaKnown RBP19.9■□□□□ 0.78
RCL1-202ENST00000381730 CADPSQ9ULU8 1353 aa19.86■□□□□ 0.77
RCL1-202ENST00000381730 PDS5BQ9NTI5 1447 aa19.82■□□□□ 0.76
RCL1-202ENST00000381730 THOC2Q8NI27 1593 aaKnown RBP19.79■□□□□ 0.76
RCL1-202ENST00000381730 DNAJC5Q9H3Z4 198 aa19.76■□□□□ 0.75
RCL1-202ENST00000381730 CFTRP13569 1480 aa19.71■□□□□ 0.75
RCL1-202ENST00000381730 KIF21AQ7Z4S6 1674 aa19.71■□□□□ 0.75
RCL1-202ENST00000381730 CCDC88BA6NC98 1476 aa19.7■□□□□ 0.74
RCL1-202ENST00000381730 FANCD2Q9BXW9 1451 aa19.62■□□□□ 0.73
RCL1-202ENST00000381730 MRC2Q9UBG0 1479 aa19.6■□□□□ 0.73
RCL1-202ENST00000381730 CEP164Q9UPV0 1460 aa19.6■□□□□ 0.73
RCL1-202ENST00000381730 SUPT5HO00267 1087 aaKnown RBP19.59■□□□□ 0.73
RCL1-202ENST00000381730 WDR62O43379 1518 aa19.57■□□□□ 0.72
RCL1-202ENST00000381730 PRDM2Q13029 1718 aa19.48■□□□□ 0.71
RCL1-202ENST00000381730 URB2Q14146 1524 aaKnown RBP19.41■□□□□ 0.7
RCL1-202ENST00000381730 ABCC8Q09428 1581 aa19.31■□□□□ 0.68
RCL1-202ENST00000381730 TOPBP1Q92547 1522 aa19.28■□□□□ 0.68
RCL1-202ENST00000381730 DNMBPQ6XZF7 1577 aa19.24■□□□□ 0.67
RCL1-202ENST00000381730 IFT140Q96RY7 1462 aa19.2■□□□□ 0.66
RCL1-202ENST00000381730 ZNF608Q9ULD9 1512 aaPredicted RBP19.11■□□□□ 0.65
RCL1-202ENST00000381730 POLA1P09884 1462 aaPredicted RBP19.11■□□□□ 0.65
RCL1-202ENST00000381730 CUX1P39880 1505 aa19.1■□□□□ 0.65
RCL1-202ENST00000381730 SOGA1O94964 1423 aa19.08■□□□□ 0.64
RCL1-202ENST00000381730 FGD5Q6ZNL6 1462 aa19.06■□□□□ 0.64
RCL1-202ENST00000381730 TARBP1Q13395 1621 aaKnown RBP19.06■□□□□ 0.64
RCL1-202ENST00000381730 RAD54L2Q9Y4B4 1467 aa19.05■□□□□ 0.64
RCL1-202ENST00000381730 OSCARQ8IYS5 282 aa19.04■□□□□ 0.64
RCL1-202ENST00000381730 AQRO60306 1485 aaKnown RBP eCLIP19.02■□□□□ 0.637e-7■■■■■ 29.6
RCL1-202ENST00000381730 EIF4G3O43432 1585 aaKnown RBP19.01■□□□□ 0.63
RCL1-202ENST00000381730 WRNQ14191 1432 aaPredicted RBP eCLIP18.98■□□□□ 0.63
RCL1-202ENST00000381730 TDRD9Q8NDG6 1382 aaKnown RBP18.97■□□□□ 0.63
RCL1-202ENST00000381730 PLPPR3Q6T4P5 718 aa18.91■□□□□ 0.62
RCL1-202ENST00000381730 WDR97A6NE52 1622 aa18.91■□□□□ 0.62
RCL1-202ENST00000381730 TOP2BQ02880 1626 aa18.91■□□□□ 0.62
RCL1-202ENST00000381730 SYNJ1O43426 1573 aa18.89■□□□□ 0.62
RCL1-202ENST00000381730 SENP3Q9H4L4 574 aaPredicted RBP18.89■□□□□ 0.61
RCL1-202ENST00000381730 BIVM-ERCC5R4GMW8 1640 aa18.89■□□□□ 0.61
RCL1-202ENST00000381730 ABCA10Q8WWZ4 1543 aa18.86■□□□□ 0.61
RCL1-202ENST00000381730 FBLN2P98095 1184 aa18.86■□□□□ 0.61
RCL1-202ENST00000381730 TRIM41Q8WV44 630 aa18.85■□□□□ 0.61
RCL1-202ENST00000381730 GRIN2BQ13224 1484 aa18.84■□□□□ 0.61
RCL1-202ENST00000381730 GAPVD1Q14C86 1478 aa18.84■□□□□ 0.61
RCL1-202ENST00000381730 SNAPC4Q5SXM2 1469 aa18.81■□□□□ 0.6
RCL1-202ENST00000381730 CHMP7Q8WUX9 453 aaPredicted RBP18.79■□□□□ 0.6
RCL1-202ENST00000381730 RIMBP3CA6NJZ7 1639 aa18.78■□□□□ 0.6
RCL1-202ENST00000381730 RIMBP3BA6NNM3 1639 aa18.78■□□□□ 0.6
RCL1-202ENST00000381730 RIMBP3Q9UFD9 1639 aa18.78■□□□□ 0.6
RCL1-202ENST00000381730 MAGI1Q96QZ7 1491 aaPredicted RBP18.78■□□□□ 0.6
RCL1-202ENST00000381730 CHD1O14646 1710 aa18.78■□□□□ 0.6
RCL1-202ENST00000381730 ARHGEF11O15085 1522 aa18.77■□□□□ 0.6
RCL1-202ENST00000381730 ABCA5Q8WWZ7 1642 aa18.77■□□□□ 0.6
RCL1-202ENST00000381730 PBRM1Q86U86 1689 aa18.75■□□□□ 0.59
RCL1-202ENST00000381730 SYNJ2O15056 1496 aa18.73■□□□□ 0.59
RCL1-202ENST00000381730 CLASP1Q7Z460 1538 aa18.66■□□□□ 0.58
RCL1-202ENST00000381730 ERICH3Q5RHP9 1530 aa18.64■□□□□ 0.58
RCL1-202ENST00000381730 ARAP1Q96P48 1450 aa18.62■□□□□ 0.57
RCL1-202ENST00000381730 FHAD1B1AJZ9 1412 aa18.61■□□□□ 0.57
RCL1-202ENST00000381730 ADAMTS12P58397 1594 aa18.6■□□□□ 0.57
RCL1-202ENST00000381730 GRIN2AQ12879 1464 aa18.59■□□□□ 0.57
RCL1-202ENST00000381730 KIF27Q86VH2 1401 aa18.59■□□□□ 0.57
RCL1-202ENST00000381730 CYB5RLQ6IPT4 315 aa18.56■□□□□ 0.56
RCL1-202ENST00000381730 IGF1RP08069 1367 aa18.54■□□□□ 0.56
RCL1-202ENST00000381730 NUP160Q12769 1436 aa18.5■□□□□ 0.55
RCL1-202ENST00000381730 CEP170Q5SW79 1584 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms