RNA–Protein interactions for RNA: ENST00000381448.8

SMG1P4-202, Transcript of SMG1 pseudogene 4, humanhuman

TSL 5

Gene SMG1P4, Length 868 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P4-202ENST00000381448 NISCHQ9Y2I1 1504 aa22.16■■□□□ 1.14
SMG1P4-202ENST00000381448 CCDC180Q9P1Z9 1646 aa19.76■□□□□ 0.75
SMG1P4-202ENST00000381448 ABCC9O60706 1549 aa19.5■□□□□ 0.71
SMG1P4-202ENST00000381448 AEBP2Q6ZN18 517 aaPredicted RBP18.88■□□□□ 0.61
SMG1P4-202ENST00000381448 DCAF8L2P0C7V8 631 aa18.75■□□□□ 0.59
SMG1P4-202ENST00000381448 RB1CC1Q8TDY2 1594 aa18.74■□□□□ 0.59
SMG1P4-202ENST00000381448 NACADO15069 1562 aa18.67■□□□□ 0.58
SMG1P4-202ENST00000381448 MYO15BQ96JP2 1530 aa18.49■□□□□ 0.55
SMG1P4-202ENST00000381448 ZCCHC6Q5VYS8 1495 aaKnown RBP18.39■□□□□ 0.54
SMG1P4-202ENST00000381448 DCAF1Q9Y4B6 1507 aa18.34■□□□□ 0.53
SMG1P4-202ENST00000381448 PABPN1Q86U42 306 aaKnown RBP eCLIP18.22■□□□□ 0.51
SMG1P4-202ENST00000381448 UNC13AQ9UPW8 1703 aa18.15■□□□□ 0.5
SMG1P4-202ENST00000381448 BICRAQ9NZM4 1560 aa18.04■□□□□ 0.48
SMG1P4-202ENST00000381448 SCRIBQ14160 1630 aa18■□□□□ 0.47
SMG1P4-202ENST00000381448 DNAJC5BQ9UF47 199 aa17.98■□□□□ 0.47
SMG1P4-202ENST00000381448 SHROOM4Q9ULL8 1493 aa17.98■□□□□ 0.47
SMG1P4-202ENST00000381448 EIF4G1Q04637 1599 aaKnown RBP17.65■□□□□ 0.42
SMG1P4-202ENST00000381448 CC2D2AQ9P2K1 1620 aa17.61■□□□□ 0.41
SMG1P4-202ENST00000381448 CHIC1Q5VXU3 224 aa17.59■□□□□ 0.41
SMG1P4-202ENST00000381448 CECR2Q9BXF3 1484 aa17.57■□□□□ 0.4
SMG1P4-202ENST00000381448 BAZ1AQ9NRL2 1556 aaPredicted RBP17.23■□□□□ 0.35
SMG1P4-202ENST00000381448 NCAPD3P42695 1498 aa17.21■□□□□ 0.35
SMG1P4-202ENST00000381448 SMARCA2P51531 1590 aa17.2■□□□□ 0.34
SMG1P4-202ENST00000381448 SMARCA4P51532 1647 aa17.2■□□□□ 0.34
SMG1P4-202ENST00000381448 ATAD2BQ9ULI0 1458 aa17.18■□□□□ 0.34
SMG1P4-202ENST00000381448 HMGXB3Q12766 1538 aa17.1■□□□□ 0.33
SMG1P4-202ENST00000381448 BAZ1BQ9UIG0 1483 aaKnown RBP17.07■□□□□ 0.32
SMG1P4-202ENST00000381448 PEG3Q9GZU2 1588 aa17.04■□□□□ 0.32
SMG1P4-202ENST00000381448 MROH2BQ7Z745 1585 aa17.02■□□□□ 0.32
SMG1P4-202ENST00000381448 ERCC6Q03468 1493 aa16.92■□□□□ 0.3
SMG1P4-202ENST00000381448 WIZO95785 1651 aa16.83■□□□□ 0.28
SMG1P4-202ENST00000381448 RSF1Q96T23 1441 aaPredicted RBP16.81■□□□□ 0.28
SMG1P4-202ENST00000381448 LAMC3Q9Y6N6 1575 aa16.81■□□□□ 0.28
SMG1P4-202ENST00000381448 NESP48681 1621 aa16.78■□□□□ 0.28
SMG1P4-202ENST00000381448 PDS5BQ9NTI5 1447 aa16.76■□□□□ 0.27
SMG1P4-202ENST00000381448 CUX2O14529 1486 aa16.75■□□□□ 0.27
SMG1P4-202ENST00000381448 CADPSQ9ULU8 1353 aa16.74■□□□□ 0.27
SMG1P4-202ENST00000381448 TOP2AP11388 1531 aaKnown RBP16.69■□□□□ 0.26
SMG1P4-202ENST00000381448 KIF21AQ7Z4S6 1674 aa16.57■□□□□ 0.24
SMG1P4-202ENST00000381448 CFTRP13569 1480 aa16.56■□□□□ 0.24
SMG1P4-202ENST00000381448 THOC2Q8NI27 1593 aaKnown RBP16.54■□□□□ 0.24
SMG1P4-202ENST00000381448 CEP164Q9UPV0 1460 aa16.54■□□□□ 0.24
SMG1P4-202ENST00000381448 FANCD2Q9BXW9 1451 aa16.52■□□□□ 0.23
SMG1P4-202ENST00000381448 MRC2Q9UBG0 1479 aa16.52■□□□□ 0.23
SMG1P4-202ENST00000381448 CCDC88BA6NC98 1476 aa16.5■□□□□ 0.23
SMG1P4-202ENST00000381448 DNAJC5Q9H3Z4 198 aa16.44■□□□□ 0.22
SMG1P4-202ENST00000381448 WDR62O43379 1518 aa16.43■□□□□ 0.22
SMG1P4-202ENST00000381448 PRDM2Q13029 1718 aa16.38■□□□□ 0.21
SMG1P4-202ENST00000381448 SUPT5HO00267 1087 aaKnown RBP16.37■□□□□ 0.21
SMG1P4-202ENST00000381448 ABCC8Q09428 1581 aa16.32■□□□□ 0.2
SMG1P4-202ENST00000381448 URB2Q14146 1524 aaKnown RBP16.29■□□□□ 0.2
SMG1P4-202ENST00000381448 TOPBP1Q92547 1522 aa16.2■□□□□ 0.18
SMG1P4-202ENST00000381448 IFT140Q96RY7 1462 aa16.2■□□□□ 0.18
SMG1P4-202ENST00000381448 DNMBPQ6XZF7 1577 aa16.18■□□□□ 0.18
SMG1P4-202ENST00000381448 OSCARQ8IYS5 282 aa16.12■□□□□ 0.17
SMG1P4-202ENST00000381448 SENP3Q9H4L4 574 aaPredicted RBP16.11■□□□□ 0.17
SMG1P4-202ENST00000381448 SOGA1O94964 1423 aa16.06■□□□□ 0.16
SMG1P4-202ENST00000381448 ZNF608Q9ULD9 1512 aaPredicted RBP16.05■□□□□ 0.16
SMG1P4-202ENST00000381448 POLA1P09884 1462 aaPredicted RBP16.05■□□□□ 0.16
SMG1P4-202ENST00000381448 FGD5Q6ZNL6 1462 aa16■□□□□ 0.15
SMG1P4-202ENST00000381448 TARBP1Q13395 1621 aaKnown RBP16■□□□□ 0.15
SMG1P4-202ENST00000381448 EIF4G3O43432 1585 aaKnown RBP16■□□□□ 0.15
SMG1P4-202ENST00000381448 AQRO60306 1485 aaKnown RBP eCLIP15.99■□□□□ 0.15
SMG1P4-202ENST00000381448 CUX1P39880 1505 aa15.99■□□□□ 0.15
SMG1P4-202ENST00000381448 RAD54L2Q9Y4B4 1467 aa15.97■□□□□ 0.15
SMG1P4-202ENST00000381448 FBLN2P98095 1184 aa15.96■□□□□ 0.15
SMG1P4-202ENST00000381448 WDR97A6NE52 1622 aa15.96■□□□□ 0.15
SMG1P4-202ENST00000381448 TDRD9Q8NDG6 1382 aaKnown RBP15.95■□□□□ 0.14
SMG1P4-202ENST00000381448 WRNQ14191 1432 aaPredicted RBP eCLIP15.91■□□□□ 0.14
SMG1P4-202ENST00000381448 CHMP7Q8WUX9 453 aaPredicted RBP15.9■□□□□ 0.14
SMG1P4-202ENST00000381448 GRIN2BQ13224 1484 aa15.88■□□□□ 0.13
SMG1P4-202ENST00000381448 TRIM41Q8WV44 630 aa15.87■□□□□ 0.13
SMG1P4-202ENST00000381448 PHF23Q9BUL5 403 aaPredicted RBP15.87■□□□□ 0.13
SMG1P4-202ENST00000381448 GAPVD1Q14C86 1478 aa15.85■□□□□ 0.13
SMG1P4-202ENST00000381448 MAGI1Q96QZ7 1491 aaPredicted RBP15.85■□□□□ 0.13
SMG1P4-202ENST00000381448 ABCA10Q8WWZ4 1543 aa15.85■□□□□ 0.13
SMG1P4-202ENST00000381448 TOP2BQ02880 1626 aa15.84■□□□□ 0.13
SMG1P4-202ENST00000381448 SNAPC4Q5SXM2 1469 aa15.84■□□□□ 0.13
SMG1P4-202ENST00000381448 BIVM-ERCC5R4GMW8 1640 aa15.82■□□□□ 0.12
SMG1P4-202ENST00000381448 CHD1O14646 1710 aa15.8■□□□□ 0.12
SMG1P4-202ENST00000381448 SYNJ2O15056 1496 aa15.78■□□□□ 0.12
SMG1P4-202ENST00000381448 SYNJ1O43426 1573 aa15.78■□□□□ 0.12
SMG1P4-202ENST00000381448 PBRM1Q86U86 1689 aa15.76■□□□□ 0.11
SMG1P4-202ENST00000381448 ABCA5Q8WWZ7 1642 aa15.75■□□□□ 0.11
SMG1P4-202ENST00000381448 RIMBP3CA6NJZ7 1639 aa15.72■□□□□ 0.11
SMG1P4-202ENST00000381448 RIMBP3BA6NNM3 1639 aa15.72■□□□□ 0.11
SMG1P4-202ENST00000381448 RIMBP3Q9UFD9 1639 aa15.72■□□□□ 0.11
SMG1P4-202ENST00000381448 ARHGEF11O15085 1522 aa15.72■□□□□ 0.11
SMG1P4-202ENST00000381448 CYB5RLQ6IPT4 315 aa15.69■□□□□ 0.1
SMG1P4-202ENST00000381448 ERICH3Q5RHP9 1530 aa15.68■□□□□ 0.1
SMG1P4-202ENST00000381448 FHAD1B1AJZ9 1412 aa15.68■□□□□ 0.1
SMG1P4-202ENST00000381448 GRIN2AQ12879 1464 aa15.64■□□□□ 0.09
SMG1P4-202ENST00000381448 CLASP1Q7Z460 1538 aa15.63■□□□□ 0.09
SMG1P4-202ENST00000381448 KIF27Q86VH2 1401 aa15.63■□□□□ 0.09
SMG1P4-202ENST00000381448 ADAMTS12P58397 1594 aa15.62■□□□□ 0.09
SMG1P4-202ENST00000381448 ARAP1Q96P48 1450 aa15.55■□□□□ 0.08
SMG1P4-202ENST00000381448 NUP160Q12769 1436 aa15.55■□□□□ 0.08
SMG1P4-202ENST00000381448 IGF1RP08069 1367 aa15.53■□□□□ 0.08
SMG1P4-202ENST00000381448 CEP170Q5SW79 1584 aa15.51■□□□□ 0.07
SMG1P4-202ENST00000381448 CUL7Q14999 1698 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms