RNA–Protein interactions for RNA: ENST00000381158.3

RAB3C-202, Transcript of RAB3C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB3C, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-202ENST00000381158 NISCHQ9Y2I1 1504 aa22.71■■□□□ 1.23
RAB3C-202ENST00000381158 AEBP2Q6ZN18 517 aaPredicted RBP21.73■■□□□ 1.07
RAB3C-202ENST00000381158 CHIC1Q5VXU3 224 aa21.4■■□□□ 1.02
RAB3C-202ENST00000381158 CCDC180Q9P1Z9 1646 aa20.44■□□□□ 0.86
RAB3C-202ENST00000381158 ABCC9O60706 1549 aa20.29■□□□□ 0.84
RAB3C-202ENST00000381158 RB1CC1Q8TDY2 1594 aa19.36■□□□□ 0.69
RAB3C-202ENST00000381158 NACADO15069 1562 aa19.24■□□□□ 0.67
RAB3C-202ENST00000381158 UNC13AQ9UPW8 1703 aa19.1■□□□□ 0.65
RAB3C-202ENST00000381158 DNAJC5BQ9UF47 199 aa19.03■□□□□ 0.64
RAB3C-202ENST00000381158 DCAF8L2P0C7V8 631 aa19■□□□□ 0.63
RAB3C-202ENST00000381158 MYO15BQ96JP2 1530 aa19■□□□□ 0.63
RAB3C-202ENST00000381158 BICRAQ9NZM4 1560 aa18.87■□□□□ 0.61
RAB3C-202ENST00000381158 PABPN1Q86U42 306 aaKnown RBP eCLIP18.85■□□□□ 0.61
RAB3C-202ENST00000381158 ZCCHC6Q5VYS8 1495 aaKnown RBP18.84■□□□□ 0.61
RAB3C-202ENST00000381158 PHF23Q9BUL5 403 aaPredicted RBP18.78■□□□□ 0.6
RAB3C-202ENST00000381158 DCAF1Q9Y4B6 1507 aa18.77■□□□□ 0.6
RAB3C-202ENST00000381158 SCRIBQ14160 1630 aa18.56■□□□□ 0.56
RAB3C-202ENST00000381158 SHROOM4Q9ULL8 1493 aa18.54■□□□□ 0.56
RAB3C-202ENST00000381158 SENP3Q9H4L4 574 aaPredicted RBP18.52■□□□□ 0.56
RAB3C-202ENST00000381158 CC2D2AQ9P2K1 1620 aa18.4■□□□□ 0.54
RAB3C-202ENST00000381158 EIF4G1Q04637 1599 aaKnown RBP18.35■□□□□ 0.53
RAB3C-202ENST00000381158 CECR2Q9BXF3 1484 aa18.27■□□□□ 0.52
RAB3C-202ENST00000381158 NCAPD3P42695 1498 aa17.75■□□□□ 0.43
RAB3C-202ENST00000381158 SMARCA4P51532 1647 aa17.74■□□□□ 0.43
RAB3C-202ENST00000381158 ATAD2BQ9ULI0 1458 aa17.69■□□□□ 0.42
RAB3C-202ENST00000381158 SMARCA2P51531 1590 aa17.66■□□□□ 0.42
RAB3C-202ENST00000381158 HMGXB3Q12766 1538 aa17.65■□□□□ 0.42
RAB3C-202ENST00000381158 BAZ1AQ9NRL2 1556 aaPredicted RBP17.62■□□□□ 0.41
RAB3C-202ENST00000381158 PEG3Q9GZU2 1588 aa17.57■□□□□ 0.4
RAB3C-202ENST00000381158 MROH2BQ7Z745 1585 aa17.51■□□□□ 0.39
RAB3C-202ENST00000381158 BAZ1BQ9UIG0 1483 aaKnown RBP17.5■□□□□ 0.39
RAB3C-202ENST00000381158 CUX2O14529 1486 aa17.49■□□□□ 0.39
RAB3C-202ENST00000381158 NESP48681 1621 aa17.48■□□□□ 0.39
RAB3C-202ENST00000381158 PLPPR3Q6T4P5 718 aa17.48■□□□□ 0.39
RAB3C-202ENST00000381158 ERCC6Q03468 1493 aa17.48■□□□□ 0.39
RAB3C-202ENST00000381158 DNAJC5Q9H3Z4 198 aa17.4■□□□□ 0.38
RAB3C-202ENST00000381158 LAMC3Q9Y6N6 1575 aa17.37■□□□□ 0.37
RAB3C-202ENST00000381158 THOC2Q8NI27 1593 aaKnown RBP17.35■□□□□ 0.37
RAB3C-202ENST00000381158 WIZO95785 1651 aa17.34■□□□□ 0.37
RAB3C-202ENST00000381158 KIF21AQ7Z4S6 1674 aa17.34■□□□□ 0.37
RAB3C-202ENST00000381158 PDS5BQ9NTI5 1447 aa17.19■□□□□ 0.34
RAB3C-202ENST00000381158 CADPSQ9ULU8 1353 aa17.17■□□□□ 0.34
RAB3C-202ENST00000381158 RSF1Q96T23 1441 aaPredicted RBP17.12■□□□□ 0.33
RAB3C-202ENST00000381158 FOXD1Q16676 465 aa17.1■□□□□ 0.33
RAB3C-202ENST00000381158 WDR62O43379 1518 aa17.08■□□□□ 0.32
RAB3C-202ENST00000381158 TOP2AP11388 1531 aaKnown RBP17.08■□□□□ 0.32
RAB3C-202ENST00000381158 MRC2Q9UBG0 1479 aa17.08■□□□□ 0.32
RAB3C-202ENST00000381158 CFTRP13569 1480 aa17.02■□□□□ 0.32
RAB3C-202ENST00000381158 CEP164Q9UPV0 1460 aa17.01■□□□□ 0.31
RAB3C-202ENST00000381158 PRDM2Q13029 1718 aa17.01■□□□□ 0.31
RAB3C-202ENST00000381158 FANCD2Q9BXW9 1451 aa17■□□□□ 0.31
RAB3C-202ENST00000381158 URB2Q14146 1524 aaKnown RBP16.9■□□□□ 0.3
RAB3C-202ENST00000381158 CCDC88BA6NC98 1476 aa16.86■□□□□ 0.29
RAB3C-202ENST00000381158 TOPBP1Q92547 1522 aa16.7■□□□□ 0.26
RAB3C-202ENST00000381158 IFT140Q96RY7 1462 aa16.67■□□□□ 0.26
RAB3C-202ENST00000381158 ZNF608Q9ULD9 1512 aaPredicted RBP16.66■□□□□ 0.26
RAB3C-202ENST00000381158 DNMBPQ6XZF7 1577 aa16.66■□□□□ 0.26
RAB3C-202ENST00000381158 ABCC8Q09428 1581 aa16.64■□□□□ 0.25
RAB3C-202ENST00000381158 OSCARQ8IYS5 282 aa16.62■□□□□ 0.25
RAB3C-202ENST00000381158 EIF4G3O43432 1585 aaKnown RBP16.62■□□□□ 0.25
RAB3C-202ENST00000381158 TARBP1Q13395 1621 aaKnown RBP16.61■□□□□ 0.25
RAB3C-202ENST00000381158 TRIM41Q8WV44 630 aa16.6■□□□□ 0.25
RAB3C-202ENST00000381158 CHD1O14646 1710 aa16.54■□□□□ 0.24
RAB3C-202ENST00000381158 RIMBP3CA6NJZ7 1639 aa16.53■□□□□ 0.24
RAB3C-202ENST00000381158 RIMBP3BA6NNM3 1639 aa16.53■□□□□ 0.24
RAB3C-202ENST00000381158 RIMBP3Q9UFD9 1639 aa16.53■□□□□ 0.24
RAB3C-202ENST00000381158 ADRA2BP18089 450 aa16.53■□□□□ 0.24
RAB3C-202ENST00000381158 POLA1P09884 1462 aaPredicted RBP16.53■□□□□ 0.24
RAB3C-202ENST00000381158 PPP6R1Q9UPN7 881 aa16.52■□□□□ 0.24
RAB3C-202ENST00000381158 AQRO60306 1485 aaKnown RBP eCLIP16.49■□□□□ 0.23
RAB3C-202ENST00000381158 RAD54L2Q9Y4B4 1467 aa16.47■□□□□ 0.23
RAB3C-202ENST00000381158 CUX1P39880 1505 aa16.45■□□□□ 0.22
RAB3C-202ENST00000381158 ARHGEF11O15085 1522 aa16.44■□□□□ 0.22
RAB3C-202ENST00000381158 FGD5Q6ZNL6 1462 aa16.43■□□□□ 0.22
RAB3C-202ENST00000381158 WDR97A6NE52 1622 aa16.42■□□□□ 0.22
RAB3C-202ENST00000381158 SOGA1O94964 1423 aa16.42■□□□□ 0.22
RAB3C-202ENST00000381158 TDRD9Q8NDG6 1382 aaKnown RBP16.37■□□□□ 0.21
RAB3C-202ENST00000381158 PBRM1Q86U86 1689 aa16.34■□□□□ 0.21
RAB3C-202ENST00000381158 SNAPC4Q5SXM2 1469 aa16.33■□□□□ 0.2
RAB3C-202ENST00000381158 CLASP1Q7Z460 1538 aa16.3■□□□□ 0.2
RAB3C-202ENST00000381158 MAGI1Q96QZ7 1491 aaPredicted RBP16.29■□□□□ 0.2
RAB3C-202ENST00000381158 SUPT5HO00267 1087 aaKnown RBP16.29■□□□□ 0.2
RAB3C-202ENST00000381158 FBLN2P98095 1184 aa16.29■□□□□ 0.2
RAB3C-202ENST00000381158 ABCA5Q8WWZ7 1642 aa16.28■□□□□ 0.2
RAB3C-202ENST00000381158 GRIN2BQ13224 1484 aa16.28■□□□□ 0.2
RAB3C-202ENST00000381158 ARAP1Q96P48 1450 aa16.28■□□□□ 0.2
RAB3C-202ENST00000381158 ABCA10Q8WWZ4 1543 aa16.25■□□□□ 0.19
RAB3C-202ENST00000381158 SYNJ1O43426 1573 aa16.25■□□□□ 0.19
RAB3C-202ENST00000381158 BIVM-ERCC5R4GMW8 1640 aa16.24■□□□□ 0.19
RAB3C-202ENST00000381158 SYNJ2O15056 1496 aa16.23■□□□□ 0.19
RAB3C-202ENST00000381158 GAPVD1Q14C86 1478 aa16.23■□□□□ 0.19
RAB3C-202ENST00000381158 CYB5RLQ6IPT4 315 aa16.23■□□□□ 0.19
RAB3C-202ENST00000381158 TOP2BQ02880 1626 aa16.2■□□□□ 0.18
RAB3C-202ENST00000381158 PIAS4Q8N2W9 510 aaPredicted RBP16.2■□□□□ 0.18
RAB3C-202ENST00000381158 CHMP7Q8WUX9 453 aaPredicted RBP16.19■□□□□ 0.18
RAB3C-202ENST00000381158 ADAMTS12P58397 1594 aa16.13■□□□□ 0.17
RAB3C-202ENST00000381158 WRNQ14191 1432 aaPredicted RBP eCLIP16.13■□□□□ 0.17
RAB3C-202ENST00000381158 GRIN2AQ12879 1464 aa16.1■□□□□ 0.17
RAB3C-202ENST00000381158 CEP170Q5SW79 1584 aa16.09■□□□□ 0.17
RAB3C-202ENST00000381158 ERCC6L2Q5T890 1561 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 278.2 ms