RNA–Protein interactions for RNA: ENST00000380103.4

SMAGP-201, Transcript of small cell adhesion glycoprotein, humanhuman

TSL 1 (best)

Gene SMAGP, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAGP-201ENST00000380103 AEBP2Q6ZN18 517 aaPredicted RBP17.46■□□□□ 0.39
SMAGP-201ENST00000380103 CHIC1Q5VXU3 224 aa16.51■□□□□ 0.23
SMAGP-201ENST00000380103 NISCHQ9Y2I1 1504 aa16.47■□□□□ 0.23
SMAGP-201ENST00000380103 SENP3Q9H4L4 574 aaPredicted RBP14.9□□□□□ -0.02
SMAGP-201ENST00000380103 PHF23Q9BUL5 403 aaPredicted RBP14.68□□□□□ -0.06
SMAGP-201ENST00000380103 CCDC180Q9P1Z9 1646 aa14.66□□□□□ -0.06
SMAGP-201ENST00000380103 ABCC9O60706 1549 aa14.49□□□□□ -0.09
SMAGP-201ENST00000380103 RB1CC1Q8TDY2 1594 aa13.92□□□□□ -0.18
SMAGP-201ENST00000380103 FOXD1Q16676 465 aa13.89□□□□□ -0.19
SMAGP-201ENST00000380103 NACADO15069 1562 aa13.88□□□□□ -0.19
SMAGP-201ENST00000380103 DCAF8L2P0C7V8 631 aa13.87□□□□□ -0.19
SMAGP-201ENST00000380103 MYO15BQ96JP2 1530 aa13.79□□□□□ -0.2
SMAGP-201ENST00000380103 ZCCHC6Q5VYS8 1495 aaKnown RBP13.67□□□□□ -0.22
SMAGP-201ENST00000380103 DCAF1Q9Y4B6 1507 aa13.65□□□□□ -0.22
SMAGP-201ENST00000380103 PABPN1Q86U42 306 aaKnown RBP eCLIP13.54□□□□□ -0.24
SMAGP-201ENST00000380103 UNC13AQ9UPW8 1703 aa13.43□□□□□ -0.26
SMAGP-201ENST00000380103 BICRAQ9NZM4 1560 aa13.42□□□□□ -0.26
SMAGP-201ENST00000380103 DNAJC5BQ9UF47 199 aa13.42□□□□□ -0.26
SMAGP-201ENST00000380103 SHROOM4Q9ULL8 1493 aa13.4□□□□□ -0.26
SMAGP-201ENST00000380103 SCRIBQ14160 1630 aa13.33□□□□□ -0.28
SMAGP-201ENST00000380103 PLPPR3Q6T4P5 718 aa13.13□□□□□ -0.31
SMAGP-201ENST00000380103 EIF4G1Q04637 1599 aaKnown RBP13.12□□□□□ -0.31
SMAGP-201ENST00000380103 CC2D2AQ9P2K1 1620 aa13.09□□□□□ -0.31
SMAGP-201ENST00000380103 CECR2Q9BXF3 1484 aa13.07□□□□□ -0.32
SMAGP-201ENST00000380103 MSH5O43196 834 aa13.04□□□□□ -0.32
SMAGP-201ENST00000380103 PPP6R1Q9UPN7 881 aa12.93□□□□□ -0.34
SMAGP-201ENST00000380103 PIAS4Q8N2W9 510 aaPredicted RBP12.91□□□□□ -0.34
SMAGP-201ENST00000380103 POTEDQ86YR6 584 aa12.86□□□□□ -0.35
SMAGP-201ENST00000380103 ADRA2BP18089 450 aa12.85□□□□□ -0.35
SMAGP-201ENST00000380103 NCAPD3P42695 1498 aa12.83□□□□□ -0.36
SMAGP-201ENST00000380103 BAZ1AQ9NRL2 1556 aaPredicted RBP12.79□□□□□ -0.36
SMAGP-201ENST00000380103 ATAD2BQ9ULI0 1458 aa12.78□□□□□ -0.36
SMAGP-201ENST00000380103 SMARCA2P51531 1590 aa12.77□□□□□ -0.37
SMAGP-201ENST00000380103 SMARCA4P51532 1647 aa12.77□□□□□ -0.37
SMAGP-201ENST00000380103 HMGXB3Q12766 1538 aa12.71□□□□□ -0.38
SMAGP-201ENST00000380103 PEG3Q9GZU2 1588 aa12.68□□□□□ -0.38
SMAGP-201ENST00000380103 BAZ1BQ9UIG0 1483 aaKnown RBP12.66□□□□□ -0.38
SMAGP-201ENST00000380103 MROH2BQ7Z745 1585 aa12.65□□□□□ -0.38
SMAGP-201ENST00000380103 ERCC6Q03468 1493 aa12.54□□□□□ -0.4
SMAGP-201ENST00000380103 RSF1Q96T23 1441 aaPredicted RBP12.5□□□□□ -0.41
SMAGP-201ENST00000380103 LAMC3Q9Y6N6 1575 aa12.48□□□□□ -0.41
SMAGP-201ENST00000380103 WIZO95785 1651 aa12.48□□□□□ -0.41
SMAGP-201ENST00000380103 CUX2O14529 1486 aa12.47□□□□□ -0.41
SMAGP-201ENST00000380103 NESP48681 1621 aa12.47□□□□□ -0.41
SMAGP-201ENST00000380103 PDS5BQ9NTI5 1447 aa12.45□□□□□ -0.42
SMAGP-201ENST00000380103 CADPSQ9ULU8 1353 aa12.45□□□□□ -0.42
SMAGP-201ENST00000380103 TOP2AP11388 1531 aaKnown RBP12.39□□□□□ -0.43
SMAGP-201ENST00000380103 CFTRP13569 1480 aa12.33□□□□□ -0.44
SMAGP-201ENST00000380103 THOC2Q8NI27 1593 aaKnown RBP12.3□□□□□ -0.44
SMAGP-201ENST00000380103 MRC2Q9UBG0 1479 aa12.28□□□□□ -0.44
SMAGP-201ENST00000380103 FANCD2Q9BXW9 1451 aa12.27□□□□□ -0.44
SMAGP-201ENST00000380103 CEP164Q9UPV0 1460 aa12.27□□□□□ -0.44
SMAGP-201ENST00000380103 DNAJC5Q9H3Z4 198 aa12.27□□□□□ -0.45
SMAGP-201ENST00000380103 KIF21AQ7Z4S6 1674 aa12.26□□□□□ -0.45
SMAGP-201ENST00000380103 CCDC88BA6NC98 1476 aa12.26□□□□□ -0.45
SMAGP-201ENST00000380103 WDR62O43379 1518 aa12.22□□□□□ -0.45
SMAGP-201ENST00000380103 ABCC8Q09428 1581 aa12.13□□□□□ -0.47
SMAGP-201ENST00000380103 URB2Q14146 1524 aaKnown RBP12.11□□□□□ -0.47
SMAGP-201ENST00000380103 SUPT5HO00267 1087 aaKnown RBP12.1□□□□□ -0.47
SMAGP-201ENST00000380103 PRDM2Q13029 1718 aa12.1□□□□□ -0.47
SMAGP-201ENST00000380103 IFT140Q96RY7 1462 aa12.04□□□□□ -0.48
SMAGP-201ENST00000380103 TOPBP1Q92547 1522 aa12.04□□□□□ -0.48
SMAGP-201ENST00000380103 DNMBPQ6XZF7 1577 aa12.01□□□□□ -0.49
SMAGP-201ENST00000380103 OSCARQ8IYS5 282 aa11.99□□□□□ -0.49
SMAGP-201ENST00000380103 SOGA1O94964 1423 aa11.94□□□□□ -0.5
SMAGP-201ENST00000380103 ZNF608Q9ULD9 1512 aaPredicted RBP11.93□□□□□ -0.5
SMAGP-201ENST00000380103 POLA1P09884 1462 aaPredicted RBP11.93□□□□□ -0.5
SMAGP-201ENST00000380103 TARBP1Q13395 1621 aaKnown RBP11.89□□□□□ -0.51
SMAGP-201ENST00000380103 FGD5Q6ZNL6 1462 aa11.89□□□□□ -0.51
SMAGP-201ENST00000380103 AQRO60306 1485 aaKnown RBP eCLIP11.88□□□□□ -0.51
SMAGP-201ENST00000380103 CUX1P39880 1505 aa11.87□□□□□ -0.51
SMAGP-201ENST00000380103 RAD54L2Q9Y4B4 1467 aa11.87□□□□□ -0.51
SMAGP-201ENST00000380103 WDR97A6NE52 1622 aa11.86□□□□□ -0.51
SMAGP-201ENST00000380103 EIF4G3O43432 1585 aaKnown RBP11.86□□□□□ -0.51
SMAGP-201ENST00000380103 TDRD9Q8NDG6 1382 aaKnown RBP11.85□□□□□ -0.51
SMAGP-201ENST00000380103 MAPK8IP2Q13387 824 aaPredicted RBP11.82□□□□□ -0.52
SMAGP-201ENST00000380103 DMRT2Q9Y5R5 561 aa11.82□□□□□ -0.52
SMAGP-201ENST00000380103 WRNQ14191 1432 aaPredicted RBP eCLIP11.81□□□□□ -0.52
SMAGP-201ENST00000380103 FBLN2P98095 1184 aa11.81□□□□□ -0.52
SMAGP-201ENST00000380103 GRIN2BQ13224 1484 aa11.8□□□□□ -0.52
SMAGP-201ENST00000380103 CHMP7Q8WUX9 453 aaPredicted RBP11.79□□□□□ -0.52
SMAGP-201ENST00000380103 ABCA10Q8WWZ4 1543 aa11.78□□□□□ -0.52
SMAGP-201ENST00000380103 TRIM41Q8WV44 630 aa11.78□□□□□ -0.52
SMAGP-201ENST00000380103 MAGI1Q96QZ7 1491 aaPredicted RBP11.77□□□□□ -0.52
SMAGP-201ENST00000380103 GAPVD1Q14C86 1478 aa11.76□□□□□ -0.53
SMAGP-201ENST00000380103 SCAF1Q9H7N4 1312 aaKnown RBP11.76□□□□□ -0.53
SMAGP-201ENST00000380103 SNAPC4Q5SXM2 1469 aa11.76□□□□□ -0.53
SMAGP-201ENST00000380103 TOP2BQ02880 1626 aa11.75□□□□□ -0.53
SMAGP-201ENST00000380103 SYNJ2O15056 1496 aa11.73□□□□□ -0.53
SMAGP-201ENST00000380103 BIVM-ERCC5R4GMW8 1640 aa11.73□□□□□ -0.53
SMAGP-201ENST00000380103 SYNJ1O43426 1573 aa11.7□□□□□ -0.54
SMAGP-201ENST00000380103 CHD1O14646 1710 aa11.69□□□□□ -0.54
SMAGP-201ENST00000380103 ABCA5Q8WWZ7 1642 aa11.69□□□□□ -0.54
SMAGP-201ENST00000380103 ARHGEF11O15085 1522 aa11.69□□□□□ -0.54
SMAGP-201ENST00000380103 RIMBP3CA6NJZ7 1639 aa11.68□□□□□ -0.54
SMAGP-201ENST00000380103 RIMBP3BA6NNM3 1639 aa11.68□□□□□ -0.54
SMAGP-201ENST00000380103 RIMBP3Q9UFD9 1639 aa11.68□□□□□ -0.54
SMAGP-201ENST00000380103 PBRM1Q86U86 1689 aa11.65□□□□□ -0.54
SMAGP-201ENST00000380103 CYB5RLQ6IPT4 315 aa11.65□□□□□ -0.54
SMAGP-201ENST00000380103 FHAD1B1AJZ9 1412 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms