RNA–Protein interactions for RNA: ENST00000379995.1

C9orf72-201, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 3

Gene C9orf72, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-201ENST00000379995 NISCHQ9Y2I1 1504 aa23.65■■□□□ 1.38
C9orf72-201ENST00000379995 ABCC9O60706 1549 aa21.24■□□□□ 0.99
C9orf72-201ENST00000379995 CCDC180Q9P1Z9 1646 aa21.08■□□□□ 0.97
C9orf72-201ENST00000379995 AEBP2Q6ZN18 517 aaPredicted RBP20.85■□□□□ 0.93
C9orf72-201ENST00000379995 RB1CC1Q8TDY2 1594 aa20.14■□□□□ 0.81
C9orf72-201ENST00000379995 DCAF8L2P0C7V8 631 aa20.08■□□□□ 0.81
C9orf72-201ENST00000379995 NACADO15069 1562 aa20.03■□□□□ 0.8
C9orf72-201ENST00000379995 CHIC1Q5VXU3 224 aa20.02■□□□□ 0.8
C9orf72-201ENST00000379995 DNAJC5BQ9UF47 199 aa19.98■□□□□ 0.79
C9orf72-201ENST00000379995 PABPN1Q86U42 306 aaKnown RBP eCLIP19.85■□□□□ 0.77
C9orf72-201ENST00000379995 MYO15BQ96JP2 1530 aa19.76■□□□□ 0.75
C9orf72-201ENST00000379995 ZCCHC6Q5VYS8 1495 aaKnown RBP19.6■□□□□ 0.73
C9orf72-201ENST00000379995 BICRAQ9NZM4 1560 aa19.56■□□□□ 0.72
C9orf72-201ENST00000379995 DCAF1Q9Y4B6 1507 aa19.51■□□□□ 0.71
C9orf72-201ENST00000379995 UNC13AQ9UPW8 1703 aa19.51■□□□□ 0.71
C9orf72-201ENST00000379995 SHROOM4Q9ULL8 1493 aa19.31■□□□□ 0.68
C9orf72-201ENST00000379995 SCRIBQ14160 1630 aa19.29■□□□□ 0.68
C9orf72-201ENST00000379995 CECR2Q9BXF3 1484 aa19.13■□□□□ 0.65
C9orf72-201ENST00000379995 CC2D2AQ9P2K1 1620 aa19.11■□□□□ 0.65
C9orf72-201ENST00000379995 EIF4G1Q04637 1599 aaKnown RBP19.1■□□□□ 0.65
C9orf72-201ENST00000379995 NCAPD3P42695 1498 aa18.55■□□□□ 0.56
C9orf72-201ENST00000379995 ATAD2BQ9ULI0 1458 aa18.49■□□□□ 0.55
C9orf72-201ENST00000379995 SMARCA4P51532 1647 aa18.39■□□□□ 0.53
C9orf72-201ENST00000379995 SMARCA2P51531 1590 aa18.38■□□□□ 0.53
C9orf72-201ENST00000379995 HMGXB3Q12766 1538 aa18.34■□□□□ 0.53
C9orf72-201ENST00000379995 BAZ1AQ9NRL2 1556 aaPredicted RBP18.34■□□□□ 0.53
C9orf72-201ENST00000379995 ERCC6Q03468 1493 aa18.33■□□□□ 0.53
C9orf72-201ENST00000379995 DNAJC5Q9H3Z4 198 aa18.32■□□□□ 0.52
C9orf72-201ENST00000379995 BAZ1BQ9UIG0 1483 aaKnown RBP18.29■□□□□ 0.52
C9orf72-201ENST00000379995 CUX2O14529 1486 aa18.27■□□□□ 0.52
C9orf72-201ENST00000379995 NESP48681 1621 aa18.23■□□□□ 0.51
C9orf72-201ENST00000379995 MROH2BQ7Z745 1585 aa18.23■□□□□ 0.51
C9orf72-201ENST00000379995 PEG3Q9GZU2 1588 aa18.22■□□□□ 0.51
C9orf72-201ENST00000379995 LAMC3Q9Y6N6 1575 aa18.04■□□□□ 0.48
C9orf72-201ENST00000379995 PDS5BQ9NTI5 1447 aa18.03■□□□□ 0.48
C9orf72-201ENST00000379995 CADPSQ9ULU8 1353 aa18.02■□□□□ 0.47
C9orf72-201ENST00000379995 THOC2Q8NI27 1593 aaKnown RBP17.96■□□□□ 0.47
C9orf72-201ENST00000379995 WIZO95785 1651 aa17.94■□□□□ 0.46
C9orf72-201ENST00000379995 SENP3Q9H4L4 574 aaPredicted RBP17.91■□□□□ 0.46
C9orf72-201ENST00000379995 RSF1Q96T23 1441 aaPredicted RBP17.9■□□□□ 0.46
C9orf72-201ENST00000379995 KIF21AQ7Z4S6 1674 aa17.86■□□□□ 0.45
C9orf72-201ENST00000379995 MRC2Q9UBG0 1479 aa17.85■□□□□ 0.45
C9orf72-201ENST00000379995 CFTRP13569 1480 aa17.78■□□□□ 0.44
C9orf72-201ENST00000379995 FANCD2Q9BXW9 1451 aa17.77■□□□□ 0.44
C9orf72-201ENST00000379995 CEP164Q9UPV0 1460 aa17.77■□□□□ 0.44
C9orf72-201ENST00000379995 WDR62O43379 1518 aa17.77■□□□□ 0.43
C9orf72-201ENST00000379995 TOP2AP11388 1531 aaKnown RBP17.76■□□□□ 0.43
C9orf72-201ENST00000379995 PHF23Q9BUL5 403 aaPredicted RBP17.63■□□□□ 0.41
C9orf72-201ENST00000379995 CCDC88BA6NC98 1476 aa17.61■□□□□ 0.41
C9orf72-201ENST00000379995 URB2Q14146 1524 aaKnown RBP17.61■□□□□ 0.41
C9orf72-201ENST00000379995 TRIM41Q8WV44 630 aa17.54■□□□□ 0.4
C9orf72-201ENST00000379995 OSCARQ8IYS5 282 aa17.52■□□□□ 0.4
C9orf72-201ENST00000379995 IFT140Q96RY7 1462 aa17.44■□□□□ 0.38
C9orf72-201ENST00000379995 TOPBP1Q92547 1522 aa17.42■□□□□ 0.38
C9orf72-201ENST00000379995 ZNF608Q9ULD9 1512 aaPredicted RBP17.42■□□□□ 0.38
C9orf72-201ENST00000379995 ABCC8Q09428 1581 aa17.38■□□□□ 0.37
C9orf72-201ENST00000379995 PRDM2Q13029 1718 aa17.35■□□□□ 0.37
C9orf72-201ENST00000379995 DNMBPQ6XZF7 1577 aa17.32■□□□□ 0.36
C9orf72-201ENST00000379995 AQRO60306 1485 aaKnown RBP eCLIP17.28■□□□□ 0.36
C9orf72-201ENST00000379995 POLA1P09884 1462 aaPredicted RBP17.25■□□□□ 0.35
C9orf72-201ENST00000379995 EIF4G3O43432 1585 aaKnown RBP17.23■□□□□ 0.35
C9orf72-201ENST00000379995 RAD54L2Q9Y4B4 1467 aa17.22■□□□□ 0.35
C9orf72-201ENST00000379995 SOGA1O94964 1423 aa17.21■□□□□ 0.35
C9orf72-201ENST00000379995 TARBP1Q13395 1621 aaKnown RBP17.21■□□□□ 0.35
C9orf72-201ENST00000379995 FBLN2P98095 1184 aa17.2■□□□□ 0.34
C9orf72-201ENST00000379995 TDRD9Q8NDG6 1382 aaKnown RBP17.19■□□□□ 0.34
C9orf72-201ENST00000379995 SUPT5HO00267 1087 aaKnown RBP17.18■□□□□ 0.34
C9orf72-201ENST00000379995 ARHGEF11O15085 1522 aa17.16■□□□□ 0.34
C9orf72-201ENST00000379995 RIMBP3CA6NJZ7 1639 aa17.15■□□□□ 0.34
C9orf72-201ENST00000379995 RIMBP3BA6NNM3 1639 aa17.15■□□□□ 0.34
C9orf72-201ENST00000379995 RIMBP3Q9UFD9 1639 aa17.15■□□□□ 0.34
C9orf72-201ENST00000379995 FGD5Q6ZNL6 1462 aa17.14■□□□□ 0.33
C9orf72-201ENST00000379995 CYB5RLQ6IPT4 315 aa17.12■□□□□ 0.33
C9orf72-201ENST00000379995 CUX1P39880 1505 aa17.11■□□□□ 0.33
C9orf72-201ENST00000379995 SNAPC4Q5SXM2 1469 aa17.07■□□□□ 0.32
C9orf72-201ENST00000379995 CHMP7Q8WUX9 453 aaPredicted RBP17.07■□□□□ 0.32
C9orf72-201ENST00000379995 GRIN2BQ13224 1484 aa17.03■□□□□ 0.32
C9orf72-201ENST00000379995 CHD1O14646 1710 aa17.02■□□□□ 0.32
C9orf72-201ENST00000379995 MAGI1Q96QZ7 1491 aaPredicted RBP17.01■□□□□ 0.31
C9orf72-201ENST00000379995 WDR97A6NE52 1622 aa17.01■□□□□ 0.31
C9orf72-201ENST00000379995 ARAP1Q96P48 1450 aa17■□□□□ 0.31
C9orf72-201ENST00000379995 GAPVD1Q14C86 1478 aa16.98■□□□□ 0.31
C9orf72-201ENST00000379995 SYNJ2O15056 1496 aa16.97■□□□□ 0.31
C9orf72-201ENST00000379995 ABCA10Q8WWZ4 1543 aa16.95■□□□□ 0.3
C9orf72-201ENST00000379995 CLASP1Q7Z460 1538 aa16.94■□□□□ 0.3
C9orf72-201ENST00000379995 TRHP20396 242 aaPredicted RBP16.92■□□□□ 0.3
C9orf72-201ENST00000379995 WRNQ14191 1432 aaPredicted RBP eCLIP16.92■□□□□ 0.3
C9orf72-201ENST00000379995 SYNJ1O43426 1573 aa16.92■□□□□ 0.3
C9orf72-201ENST00000379995 ABCA5Q8WWZ7 1642 aa16.85■□□□□ 0.29
C9orf72-201ENST00000379995 PBRM1Q86U86 1689 aa16.81■□□□□ 0.28
C9orf72-201ENST00000379995 TOP2BQ02880 1626 aa16.81■□□□□ 0.28
C9orf72-201ENST00000379995 GRIN2AQ12879 1464 aa16.8■□□□□ 0.28
C9orf72-201ENST00000379995 FHAD1B1AJZ9 1412 aa16.78■□□□□ 0.28
C9orf72-201ENST00000379995 BIVM-ERCC5R4GMW8 1640 aa16.76■□□□□ 0.27
C9orf72-201ENST00000379995 NUP160Q12769 1436 aa16.76■□□□□ 0.27
C9orf72-201ENST00000379995 ADAMTS12P58397 1594 aa16.74■□□□□ 0.27
C9orf72-201ENST00000379995 ERICH3Q5RHP9 1530 aa16.71■□□□□ 0.27
C9orf72-201ENST00000379995 CEP170Q5SW79 1584 aa16.7■□□□□ 0.26
C9orf72-201ENST00000379995 ERCC6L2Q5T890 1561 aa16.69■□□□□ 0.26
C9orf72-201ENST00000379995 JPH4Q96JJ6 628 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms