RNA–Protein interactions for RNA: ENST00000379819.5

APTX-205, Transcript of aprataxin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APTX, Length 1,820 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-205ENST00000379819 NISCHQ9Y2I1 1504 aa23.99■■□□□ 1.43
APTX-205ENST00000379819 ABCC9O60706 1549 aa21.56■■□□□ 1.04
APTX-205ENST00000379819 CCDC180Q9P1Z9 1646 aa21.52■■□□□ 1.04
APTX-205ENST00000379819 RB1CC1Q8TDY2 1594 aa20.48■□□□□ 0.87
APTX-205ENST00000379819 DCAF8L2P0C7V8 631 aa20.36■□□□□ 0.85
APTX-205ENST00000379819 NACADO15069 1562 aa20.31■□□□□ 0.84
APTX-205ENST00000379819 DNAJC5BQ9UF47 199 aa20.12■□□□□ 0.81
APTX-205ENST00000379819 UNC13AQ9UPW8 1703 aa20.08■□□□□ 0.81
APTX-205ENST00000379819 PABPN1Q86U42 306 aaKnown RBP eCLIP20.07■□□□□ 0.8
APTX-205ENST00000379819 MYO15BQ96JP2 1530 aa19.96■□□□□ 0.79
APTX-205ENST00000379819 ZCCHC6Q5VYS8 1495 aaKnown RBP19.9■□□□□ 0.78
APTX-205ENST00000379819 BICRAQ9NZM4 1560 aa19.87■□□□□ 0.77
APTX-205ENST00000379819 DCAF1Q9Y4B6 1507 aa19.75■□□□□ 0.75
APTX-205ENST00000379819 SCRIBQ14160 1630 aa19.72■□□□□ 0.75
APTX-205ENST00000379819 AEBP2Q6ZN18 517 aaPredicted RBP19.69■□□□□ 0.74
APTX-205ENST00000379819 SHROOM4Q9ULL8 1493 aa19.52■□□□□ 0.72
APTX-205ENST00000379819 CC2D2AQ9P2K1 1620 aa19.45■□□□□ 0.7
APTX-205ENST00000379819 EIF4G1Q04637 1599 aaKnown RBP19.4■□□□□ 0.7
APTX-205ENST00000379819 CECR2Q9BXF3 1484 aa19.38■□□□□ 0.69
APTX-205ENST00000379819 CHIC1Q5VXU3 224 aa19.04■□□□□ 0.64
APTX-205ENST00000379819 SMARCA4P51532 1647 aa18.75■□□□□ 0.59
APTX-205ENST00000379819 NCAPD3P42695 1498 aa18.71■□□□□ 0.59
APTX-205ENST00000379819 ATAD2BQ9ULI0 1458 aa18.71■□□□□ 0.59
APTX-205ENST00000379819 SMARCA2P51531 1590 aa18.67■□□□□ 0.58
APTX-205ENST00000379819 BAZ1AQ9NRL2 1556 aaPredicted RBP18.63■□□□□ 0.57
APTX-205ENST00000379819 HMGXB3Q12766 1538 aa18.62■□□□□ 0.57
APTX-205ENST00000379819 ERCC6Q03468 1493 aa18.62■□□□□ 0.57
APTX-205ENST00000379819 BAZ1BQ9UIG0 1483 aaKnown RBP18.58■□□□□ 0.56
APTX-205ENST00000379819 NESP48681 1621 aa18.53■□□□□ 0.56
APTX-205ENST00000379819 MROH2BQ7Z745 1585 aa18.53■□□□□ 0.56
APTX-205ENST00000379819 PEG3Q9GZU2 1588 aa18.48■□□□□ 0.55
APTX-205ENST00000379819 CUX2O14529 1486 aa18.47■□□□□ 0.55
APTX-205ENST00000379819 DNAJC5Q9H3Z4 198 aa18.4■□□□□ 0.54
APTX-205ENST00000379819 WIZO95785 1651 aa18.35■□□□□ 0.53
APTX-205ENST00000379819 LAMC3Q9Y6N6 1575 aa18.34■□□□□ 0.53
APTX-205ENST00000379819 KIF21AQ7Z4S6 1674 aa18.32■□□□□ 0.52
APTX-205ENST00000379819 THOC2Q8NI27 1593 aaKnown RBP18.31■□□□□ 0.52
APTX-205ENST00000379819 PDS5BQ9NTI5 1447 aa18.23■□□□□ 0.51
APTX-205ENST00000379819 CADPSQ9ULU8 1353 aa18.18■□□□□ 0.5
APTX-205ENST00000379819 RSF1Q96T23 1441 aaPredicted RBP18.12■□□□□ 0.49
APTX-205ENST00000379819 MRC2Q9UBG0 1479 aa18.09■□□□□ 0.49
APTX-205ENST00000379819 TOP2AP11388 1531 aaKnown RBP18.07■□□□□ 0.48
APTX-205ENST00000379819 CEP164Q9UPV0 1460 aa18.05■□□□□ 0.48
APTX-205ENST00000379819 WDR62O43379 1518 aa18.03■□□□□ 0.48
APTX-205ENST00000379819 FANCD2Q9BXW9 1451 aa18.03■□□□□ 0.48
APTX-205ENST00000379819 CFTRP13569 1480 aa17.98■□□□□ 0.47
APTX-205ENST00000379819 PRDM2Q13029 1718 aa17.89■□□□□ 0.45
APTX-205ENST00000379819 URB2Q14146 1524 aaKnown RBP17.87■□□□□ 0.45
APTX-205ENST00000379819 CCDC88BA6NC98 1476 aa17.86■□□□□ 0.45
APTX-205ENST00000379819 TRIM41Q8WV44 630 aa17.77■□□□□ 0.43
APTX-205ENST00000379819 SUPT5HO00267 1087 aaKnown RBP17.75■□□□□ 0.43
APTX-205ENST00000379819 TOPBP1Q92547 1522 aa17.69■□□□□ 0.42
APTX-205ENST00000379819 ZNF608Q9ULD9 1512 aaPredicted RBP17.67■□□□□ 0.42
APTX-205ENST00000379819 OSCARQ8IYS5 282 aa17.65■□□□□ 0.42
APTX-205ENST00000379819 IFT140Q96RY7 1462 aa17.65■□□□□ 0.42
APTX-205ENST00000379819 DNMBPQ6XZF7 1577 aa17.63■□□□□ 0.41
APTX-205ENST00000379819 EIF4G3O43432 1585 aaKnown RBP17.59■□□□□ 0.41
APTX-205ENST00000379819 ABCC8Q09428 1581 aa17.59■□□□□ 0.41
APTX-205ENST00000379819 TARBP1Q13395 1621 aaKnown RBP17.52■□□□□ 0.4
APTX-205ENST00000379819 POLA1P09884 1462 aaPredicted RBP17.51■□□□□ 0.39
APTX-205ENST00000379819 AQRO60306 1485 aaKnown RBP eCLIP17.5■□□□□ 0.39
APTX-205ENST00000379819 CHD1O14646 1710 aa17.48■□□□□ 0.39
APTX-205ENST00000379819 RIMBP3CA6NJZ7 1639 aa17.48■□□□□ 0.39
APTX-205ENST00000379819 RIMBP3BA6NNM3 1639 aa17.48■□□□□ 0.39
APTX-205ENST00000379819 RIMBP3Q9UFD9 1639 aa17.48■□□□□ 0.39
APTX-205ENST00000379819 RAD54L2Q9Y4B4 1467 aa17.47■□□□□ 0.39
APTX-205ENST00000379819 FBLN2P98095 1184 aa17.44■□□□□ 0.38
APTX-205ENST00000379819 FGD5Q6ZNL6 1462 aa17.42■□□□□ 0.38
APTX-205ENST00000379819 SOGA1O94964 1423 aa17.42■□□□□ 0.38
APTX-205ENST00000379819 TDRD9Q8NDG6 1382 aaKnown RBP17.41■□□□□ 0.38
APTX-205ENST00000379819 ARHGEF11O15085 1522 aa17.41■□□□□ 0.38
APTX-205ENST00000379819 CUX1P39880 1505 aa17.41■□□□□ 0.38
APTX-205ENST00000379819 SNAPC4Q5SXM2 1469 aa17.34■□□□□ 0.37
APTX-205ENST00000379819 WDR97A6NE52 1622 aa17.3■□□□□ 0.36
APTX-205ENST00000379819 CYB5RLQ6IPT4 315 aa17.29■□□□□ 0.36
APTX-205ENST00000379819 PBRM1Q86U86 1689 aa17.27■□□□□ 0.36
APTX-205ENST00000379819 GRIN2BQ13224 1484 aa17.26■□□□□ 0.35
APTX-205ENST00000379819 CHMP7Q8WUX9 453 aaPredicted RBP17.26■□□□□ 0.35
APTX-205ENST00000379819 ARAP1Q96P48 1450 aa17.24■□□□□ 0.35
APTX-205ENST00000379819 MAGI1Q96QZ7 1491 aaPredicted RBP17.24■□□□□ 0.35
APTX-205ENST00000379819 SYNJ1O43426 1573 aa17.22■□□□□ 0.35
APTX-205ENST00000379819 GAPVD1Q14C86 1478 aa17.22■□□□□ 0.35
APTX-205ENST00000379819 SYNJ2O15056 1496 aa17.2■□□□□ 0.34
APTX-205ENST00000379819 CLASP1Q7Z460 1538 aa17.2■□□□□ 0.34
APTX-205ENST00000379819 ABCA5Q8WWZ7 1642 aa17.18■□□□□ 0.34
APTX-205ENST00000379819 ABCA10Q8WWZ4 1543 aa17.18■□□□□ 0.34
APTX-205ENST00000379819 BIVM-ERCC5R4GMW8 1640 aa17.14■□□□□ 0.33
APTX-205ENST00000379819 TRHP20396 242 aaPredicted RBP17.13■□□□□ 0.33
APTX-205ENST00000379819 WRNQ14191 1432 aaPredicted RBP eCLIP17.13■□□□□ 0.33
APTX-205ENST00000379819 TOP2BQ02880 1626 aa17.12■□□□□ 0.33
APTX-205ENST00000379819 ADAMTS12P58397 1594 aa17.07■□□□□ 0.32
APTX-205ENST00000379819 GRIN2AQ12879 1464 aa17.05■□□□□ 0.32
APTX-205ENST00000379819 CEP170Q5SW79 1584 aa17.01■□□□□ 0.31
APTX-205ENST00000379819 ERCC6L2Q5T890 1561 aa16.99■□□□□ 0.31
APTX-205ENST00000379819 FHAD1B1AJZ9 1412 aa16.97■□□□□ 0.31
APTX-205ENST00000379819 ERICH3Q5RHP9 1530 aa16.97■□□□□ 0.31
APTX-205ENST00000379819 NUP160Q12769 1436 aa16.95■□□□□ 0.3
APTX-205ENST00000379819 SHROOM2Q13796 1616 aa16.89■□□□□ 0.3
APTX-205ENST00000379819 RUSC2Q8N2Y8 1516 aa16.83■□□□□ 0.29
APTX-205ENST00000379819 PRG4Q92954 1404 aaPredicted RBP16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms