RNA–Protein interactions for RNA: ENST00000379348.2

PHACTR1-204, Transcript of phosphatase and actin regulator 1, humanhuman

TSL 1 (best) BASIC

Gene PHACTR1, Length 795 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1-204ENST00000379348 AEBP2Q6ZN18 517 aaPredicted RBP20.79■□□□□ 0.92
PHACTR1-204ENST00000379348 NISCHQ9Y2I1 1504 aa20.68■□□□□ 0.9
PHACTR1-204ENST00000379348 CHIC1Q5VXU3 224 aa19.46■□□□□ 0.71
PHACTR1-204ENST00000379348 ABCC9O60706 1549 aa18.89■□□□□ 0.61
PHACTR1-204ENST00000379348 CCDC180Q9P1Z9 1646 aa18.63■□□□□ 0.57
PHACTR1-204ENST00000379348 DNAJC5BQ9UF47 199 aa17.96■□□□□ 0.47
PHACTR1-204ENST00000379348 SENP3Q9H4L4 574 aaPredicted RBP17.86■□□□□ 0.45
PHACTR1-204ENST00000379348 RB1CC1Q8TDY2 1594 aa17.79■□□□□ 0.44
PHACTR1-204ENST00000379348 UNC13AQ9UPW8 1703 aa17.64■□□□□ 0.41
PHACTR1-204ENST00000379348 NACADO15069 1562 aa17.61■□□□□ 0.41
PHACTR1-204ENST00000379348 PABPN1Q86U42 306 aaKnown RBP eCLIP17.56■□□□□ 0.4
PHACTR1-204ENST00000379348 DCAF8L2P0C7V8 631 aa17.53■□□□□ 0.4
PHACTR1-204ENST00000379348 PHF23Q9BUL5 403 aaPredicted RBP17.52■□□□□ 0.4
PHACTR1-204ENST00000379348 BICRAQ9NZM4 1560 aa17.43■□□□□ 0.38
PHACTR1-204ENST00000379348 MYO15BQ96JP2 1530 aa17.23■□□□□ 0.35
PHACTR1-204ENST00000379348 ZCCHC6Q5VYS8 1495 aaKnown RBP17.1■□□□□ 0.33
PHACTR1-204ENST00000379348 SCRIBQ14160 1630 aa17.07■□□□□ 0.32
PHACTR1-204ENST00000379348 CC2D2AQ9P2K1 1620 aa17.06■□□□□ 0.32
PHACTR1-204ENST00000379348 DCAF1Q9Y4B6 1507 aa16.98■□□□□ 0.31
PHACTR1-204ENST00000379348 CECR2Q9BXF3 1484 aa16.97■□□□□ 0.31
PHACTR1-204ENST00000379348 EIF4G1Q04637 1599 aaKnown RBP16.94■□□□□ 0.3
PHACTR1-204ENST00000379348 SHROOM4Q9ULL8 1493 aa16.9■□□□□ 0.3
PHACTR1-204ENST00000379348 FOXD1Q16676 465 aa16.68■□□□□ 0.26
PHACTR1-204ENST00000379348 DNAJC5Q9H3Z4 198 aa16.47■□□□□ 0.23
PHACTR1-204ENST00000379348 POTEDQ86YR6 584 aa16.37■□□□□ 0.21
PHACTR1-204ENST00000379348 NCAPD3P42695 1498 aa16.26■□□□□ 0.19
PHACTR1-204ENST00000379348 NESP48681 1621 aa16.23■□□□□ 0.19
PHACTR1-204ENST00000379348 ATAD2BQ9ULI0 1458 aa16.23■□□□□ 0.19
PHACTR1-204ENST00000379348 CUX2O14529 1486 aa16.22■□□□□ 0.19
PHACTR1-204ENST00000379348 SMARCA4P51532 1647 aa16.22■□□□□ 0.19
PHACTR1-204ENST00000379348 ERCC6Q03468 1493 aa16.22■□□□□ 0.19
PHACTR1-204ENST00000379348 HMGXB3Q12766 1538 aa16.14■□□□□ 0.17
PHACTR1-204ENST00000379348 SMARCA2P51531 1590 aa16.11■□□□□ 0.17
PHACTR1-204ENST00000379348 THOC2Q8NI27 1593 aaKnown RBP16.08■□□□□ 0.16
PHACTR1-204ENST00000379348 KIF21AQ7Z4S6 1674 aa16.05■□□□□ 0.16
PHACTR1-204ENST00000379348 BAZ1BQ9UIG0 1483 aaKnown RBP16.04■□□□□ 0.16
PHACTR1-204ENST00000379348 BAZ1AQ9NRL2 1556 aaPredicted RBP16.01■□□□□ 0.15
PHACTR1-204ENST00000379348 MROH2BQ7Z745 1585 aa16■□□□□ 0.15
PHACTR1-204ENST00000379348 PEG3Q9GZU2 1588 aa16■□□□□ 0.15
PHACTR1-204ENST00000379348 LAMC3Q9Y6N6 1575 aa15.94■□□□□ 0.14
PHACTR1-204ENST00000379348 WIZO95785 1651 aa15.86■□□□□ 0.13
PHACTR1-204ENST00000379348 MSH5O43196 834 aa15.85■□□□□ 0.13
PHACTR1-204ENST00000379348 PDS5BQ9NTI5 1447 aa15.78■□□□□ 0.12
PHACTR1-204ENST00000379348 CADPSQ9ULU8 1353 aa15.75■□□□□ 0.11
PHACTR1-204ENST00000379348 WDR62O43379 1518 aa15.73■□□□□ 0.11
PHACTR1-204ENST00000379348 MRC2Q9UBG0 1479 aa15.73■□□□□ 0.11
PHACTR1-204ENST00000379348 TRIM41Q8WV44 630 aa15.73■□□□□ 0.11
PHACTR1-204ENST00000379348 CEP164Q9UPV0 1460 aa15.62■□□□□ 0.09
PHACTR1-204ENST00000379348 FANCD2Q9BXW9 1451 aa15.61■□□□□ 0.09
PHACTR1-204ENST00000379348 URB2Q14146 1524 aaKnown RBP15.57■□□□□ 0.08
PHACTR1-204ENST00000379348 CFTRP13569 1480 aa15.55■□□□□ 0.08
PHACTR1-204ENST00000379348 RSF1Q96T23 1441 aaPredicted RBP15.54■□□□□ 0.08
PHACTR1-204ENST00000379348 TOP2AP11388 1531 aaKnown RBP15.52■□□□□ 0.07
PHACTR1-204ENST00000379348 PRDM2Q13029 1718 aa15.51■□□□□ 0.07
PHACTR1-204ENST00000379348 PIAS4Q8N2W9 510 aaPredicted RBP15.45■□□□□ 0.06
PHACTR1-204ENST00000379348 OSCARQ8IYS5 282 aa15.43■□□□□ 0.06
PHACTR1-204ENST00000379348 RIMBP3CA6NJZ7 1639 aa15.43■□□□□ 0.06
PHACTR1-204ENST00000379348 RIMBP3BA6NNM3 1639 aa15.43■□□□□ 0.06
PHACTR1-204ENST00000379348 RIMBP3Q9UFD9 1639 aa15.43■□□□□ 0.06
PHACTR1-204ENST00000379348 ZNF608Q9ULD9 1512 aaPredicted RBP15.43■□□□□ 0.06
PHACTR1-204ENST00000379348 CCDC88BA6NC98 1476 aa15.38■□□□□ 0.05
PHACTR1-204ENST00000379348 TOPBP1Q92547 1522 aa15.33■□□□□ 0.04
PHACTR1-204ENST00000379348 EIF4G3O43432 1585 aaKnown RBP15.32■□□□□ 0.04
PHACTR1-204ENST00000379348 CHD1O14646 1710 aa15.31■□□□□ 0.04
PHACTR1-204ENST00000379348 ARHGEF11O15085 1522 aa15.3■□□□□ 0.04
PHACTR1-204ENST00000379348 IFT140Q96RY7 1462 aa15.28■□□□□ 0.04
PHACTR1-204ENST00000379348 TARBP1Q13395 1621 aaKnown RBP15.25■□□□□ 0.03
PHACTR1-204ENST00000379348 DNMBPQ6XZF7 1577 aa15.24■□□□□ 0.03
PHACTR1-204ENST00000379348 AQRO60306 1485 aaKnown RBP eCLIP15.23■□□□□ 0.03
PHACTR1-204ENST00000379348 ARAP1Q96P48 1450 aa15.16■□□□□ 0.02
PHACTR1-204ENST00000379348 RAD54L2Q9Y4B4 1467 aa15.16■□□□□ 0.02
PHACTR1-204ENST00000379348 CYB5RLQ6IPT4 315 aa15.16■□□□□ 0.02
PHACTR1-204ENST00000379348 PPP6R1Q9UPN7 881 aa15.16■□□□□ 0.02
PHACTR1-204ENST00000379348 POLA1P09884 1462 aaPredicted RBP15.15■□□□□ 0.02
PHACTR1-204ENST00000379348 ABCC8Q09428 1581 aa15.13■□□□□ 0.01
PHACTR1-204ENST00000379348 PLPPR3Q6T4P5 718 aa15.13■□□□□ 0.01
PHACTR1-204ENST00000379348 FBLN2P98095 1184 aa15.1■□□□□ 0.01
PHACTR1-204ENST00000379348 TDRD9Q8NDG6 1382 aaKnown RBP15.09■□□□□ 0.01
PHACTR1-204ENST00000379348 ADRA2BP18089 450 aa15.07■□□□□ 0
PHACTR1-204ENST00000379348 SNAPC4Q5SXM2 1469 aa15.05■□□□□ -0
PHACTR1-204ENST00000379348 FGD5Q6ZNL6 1462 aa15.05■□□□□ -0
PHACTR1-204ENST00000379348 CUX1P39880 1505 aa15.04■□□□□ -0
PHACTR1-204ENST00000379348 CLASP1Q7Z460 1538 aa15.04■□□□□ -0
PHACTR1-204ENST00000379348 SOGA1O94964 1423 aa15.03■□□□□ -0
PHACTR1-204ENST00000379348 WDR97A6NE52 1622 aa15.03■□□□□ -0
PHACTR1-204ENST00000379348 TRHP20396 242 aaPredicted RBP15.02■□□□□ -0
PHACTR1-204ENST00000379348 PBRM1Q86U86 1689 aa15□□□□□ -0.01
PHACTR1-204ENST00000379348 SYNJ1O43426 1573 aa14.94□□□□□ -0.02
PHACTR1-204ENST00000379348 MAGI1Q96QZ7 1491 aaPredicted RBP14.91□□□□□ -0.02
PHACTR1-204ENST00000379348 ERCC6L2Q5T890 1561 aa14.9□□□□□ -0.02
PHACTR1-204ENST00000379348 GRIN2BQ13224 1484 aa14.9□□□□□ -0.02
PHACTR1-204ENST00000379348 CHMP7Q8WUX9 453 aaPredicted RBP14.9□□□□□ -0.02
PHACTR1-204ENST00000379348 SYNJ2O15056 1496 aa14.89□□□□□ -0.03
PHACTR1-204ENST00000379348 ABCA5Q8WWZ7 1642 aa14.88□□□□□ -0.03
PHACTR1-204ENST00000379348 GAPVD1Q14C86 1478 aa14.86□□□□□ -0.03
PHACTR1-204ENST00000379348 ABCA10Q8WWZ4 1543 aa14.81□□□□□ -0.04
PHACTR1-204ENST00000379348 CEP170Q5SW79 1584 aa14.8□□□□□ -0.04
PHACTR1-204ENST00000379348 ADAMTS12P58397 1594 aa14.77□□□□□ -0.04
PHACTR1-204ENST00000379348 GRIN2AQ12879 1464 aa14.76□□□□□ -0.05
PHACTR1-204ENST00000379348 BIVM-ERCC5R4GMW8 1640 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms