RNA–Protein interactions for RNA: ENST00000379331.3

PRDX4-201, Transcript of peroxiredoxin 4, humanhuman

TSL 2 BASIC

Gene PRDX4, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDX4-201ENST00000379331 NISCHQ9Y2I1 1504 aa29.8■■■□□ 2.36
PRDX4-201ENST00000379331 ABCC9O60706 1549 aa26.85■■□□□ 1.89
PRDX4-201ENST00000379331 CCDC180Q9P1Z9 1646 aa26.72■■□□□ 1.87
PRDX4-201ENST00000379331 RB1CC1Q8TDY2 1594 aa25.48■■□□□ 1.67
PRDX4-201ENST00000379331 DNAJC5BQ9UF47 199 aa25.36■■□□□ 1.65
PRDX4-201ENST00000379331 NACADO15069 1562 aa25.31■■□□□ 1.64
PRDX4-201ENST00000379331 DCAF8L2P0C7V8 631 aa25.13■■□□□ 1.61
PRDX4-201ENST00000379331 PABPN1Q86U42 306 aaKnown RBP eCLIP25.01■■□□□ 1.59
PRDX4-201ENST00000379331 MYO15BQ96JP2 1530 aa24.96■■□□□ 1.59
PRDX4-201ENST00000379331 UNC13AQ9UPW8 1703 aa24.89■■□□□ 1.58
PRDX4-201ENST00000379331 BICRAQ9NZM4 1560 aa24.81■■□□□ 1.56
PRDX4-201ENST00000379331 ZCCHC6Q5VYS8 1495 aaKnown RBP24.68■■□□□ 1.54
PRDX4-201ENST00000379331 DCAF1Q9Y4B6 1507 aa24.61■■□□□ 1.53
PRDX4-201ENST00000379331 SHROOM4Q9ULL8 1493 aa24.43■■□□□ 1.5
PRDX4-201ENST00000379331 AEBP2Q6ZN18 517 aaPredicted RBP24.4■■□□□ 1.5
PRDX4-201ENST00000379331 SCRIBQ14160 1630 aa24.35■■□□□ 1.49
PRDX4-201ENST00000379331 CC2D2AQ9P2K1 1620 aa24.24■■□□□ 1.47
PRDX4-201ENST00000379331 CECR2Q9BXF3 1484 aa24.19■■□□□ 1.46
PRDX4-201ENST00000379331 EIF4G1Q04637 1599 aaKnown RBP24.17■■□□□ 1.46
PRDX4-201ENST00000379331 NCAPD3P42695 1498 aa23.41■■□□□ 1.34
PRDX4-201ENST00000379331 CHIC1Q5VXU3 224 aa23.35■■□□□ 1.33
PRDX4-201ENST00000379331 ATAD2BQ9ULI0 1458 aa23.32■■□□□ 1.32
PRDX4-201ENST00000379331 DNAJC5Q9H3Z4 198 aa23.31■■□□□ 1.32
PRDX4-201ENST00000379331 SMARCA4P51532 1647 aa23.24■■□□□ 1.31
PRDX4-201ENST00000379331 SMARCA2P51531 1590 aa23.2■■□□□ 1.3
PRDX4-201ENST00000379331 HMGXB3Q12766 1538 aa23.19■■□□□ 1.3
PRDX4-201ENST00000379331 CUX2O14529 1486 aa23.17■■□□□ 1.3
PRDX4-201ENST00000379331 ERCC6Q03468 1493 aa23.15■■□□□ 1.3
PRDX4-201ENST00000379331 BAZ1AQ9NRL2 1556 aaPredicted RBP23.1■■□□□ 1.29
PRDX4-201ENST00000379331 NESP48681 1621 aa23.07■■□□□ 1.28
PRDX4-201ENST00000379331 BAZ1BQ9UIG0 1483 aaKnown RBP23.05■■□□□ 1.28
PRDX4-201ENST00000379331 PEG3Q9GZU2 1588 aa23.03■■□□□ 1.28
PRDX4-201ENST00000379331 MROH2BQ7Z745 1585 aa22.97■■□□□ 1.27
PRDX4-201ENST00000379331 LAMC3Q9Y6N6 1575 aa22.84■■□□□ 1.25
PRDX4-201ENST00000379331 THOC2Q8NI27 1593 aaKnown RBP22.82■■□□□ 1.24
PRDX4-201ENST00000379331 PDS5BQ9NTI5 1447 aa22.72■■□□□ 1.23
PRDX4-201ENST00000379331 KIF21AQ7Z4S6 1674 aa22.7■■□□□ 1.22
PRDX4-201ENST00000379331 CADPSQ9ULU8 1353 aa22.68■■□□□ 1.22
PRDX4-201ENST00000379331 WIZO95785 1651 aa22.65■■□□□ 1.22
PRDX4-201ENST00000379331 MRC2Q9UBG0 1479 aa22.54■■□□□ 1.2
PRDX4-201ENST00000379331 WDR62O43379 1518 aa22.5■■□□□ 1.19
PRDX4-201ENST00000379331 RSF1Q96T23 1441 aaPredicted RBP22.48■■□□□ 1.19
PRDX4-201ENST00000379331 CEP164Q9UPV0 1460 aa22.41■■□□□ 1.18
PRDX4-201ENST00000379331 CFTRP13569 1480 aa22.41■■□□□ 1.18
PRDX4-201ENST00000379331 FANCD2Q9BXW9 1451 aa22.41■■□□□ 1.18
PRDX4-201ENST00000379331 TOP2AP11388 1531 aaKnown RBP22.36■■□□□ 1.17
PRDX4-201ENST00000379331 URB2Q14146 1524 aaKnown RBP22.26■■□□□ 1.15
PRDX4-201ENST00000379331 TRIM41Q8WV44 630 aa22.19■■□□□ 1.14
PRDX4-201ENST00000379331 CCDC88BA6NC98 1476 aa22.14■■□□□ 1.13
PRDX4-201ENST00000379331 OSCARQ8IYS5 282 aa22.1■■□□□ 1.13
PRDX4-201ENST00000379331 PRDM2Q13029 1718 aa22.06■■□□□ 1.12
PRDX4-201ENST00000379331 ZNF608Q9ULD9 1512 aaPredicted RBP22■■□□□ 1.11
PRDX4-201ENST00000379331 IFT140Q96RY7 1462 aa21.99■■□□□ 1.11
PRDX4-201ENST00000379331 TOPBP1Q92547 1522 aa21.98■■□□□ 1.11
PRDX4-201ENST00000379331 ABCC8Q09428 1581 aa21.89■■□□□ 1.09
PRDX4-201ENST00000379331 DNMBPQ6XZF7 1577 aa21.87■■□□□ 1.09
PRDX4-201ENST00000379331 EIF4G3O43432 1585 aaKnown RBP21.82■■□□□ 1.08
PRDX4-201ENST00000379331 RIMBP3CA6NJZ7 1639 aa21.81■■□□□ 1.08
PRDX4-201ENST00000379331 RIMBP3BA6NNM3 1639 aa21.81■■□□□ 1.08
PRDX4-201ENST00000379331 RIMBP3Q9UFD9 1639 aa21.81■■□□□ 1.08
PRDX4-201ENST00000379331 TARBP1Q13395 1621 aaKnown RBP21.79■■□□□ 1.08
PRDX4-201ENST00000379331 AQRO60306 1485 aaKnown RBP eCLIP21.77■■□□□ 1.08
PRDX4-201ENST00000379331 POLA1P09884 1462 aaPredicted RBP21.76■■□□□ 1.07
PRDX4-201ENST00000379331 ARHGEF11O15085 1522 aa21.75■■□□□ 1.07
PRDX4-201ENST00000379331 RAD54L2Q9Y4B4 1467 aa21.69■■□□□ 1.06
PRDX4-201ENST00000379331 CHD1O14646 1710 aa21.65■■□□□ 1.06
PRDX4-201ENST00000379331 SOGA1O94964 1423 aa21.64■■□□□ 1.06
PRDX4-201ENST00000379331 TDRD9Q8NDG6 1382 aaKnown RBP21.63■■□□□ 1.05
PRDX4-201ENST00000379331 FBLN2P98095 1184 aa21.6■■□□□ 1.05
PRDX4-201ENST00000379331 CYB5RLQ6IPT4 315 aa21.6■■□□□ 1.05
PRDX4-201ENST00000379331 FGD5Q6ZNL6 1462 aa21.59■■□□□ 1.05
PRDX4-201ENST00000379331 CUX1P39880 1505 aa21.58■■□□□ 1.04
PRDX4-201ENST00000379331 ARAP1Q96P48 1450 aa21.56■■□□□ 1.04
PRDX4-201ENST00000379331 SNAPC4Q5SXM2 1469 aa21.53■■□□□ 1.04
PRDX4-201ENST00000379331 WDR97A6NE52 1622 aa21.52■■□□□ 1.04
PRDX4-201ENST00000379331 GRIN2BQ13224 1484 aa21.46■■□□□ 1.03
PRDX4-201ENST00000379331 MAGI1Q96QZ7 1491 aaPredicted RBP21.46■■□□□ 1.03
PRDX4-201ENST00000379331 CLASP1Q7Z460 1538 aa21.46■■□□□ 1.03
PRDX4-201ENST00000379331 CHMP7Q8WUX9 453 aaPredicted RBP21.44■■□□□ 1.02
PRDX4-201ENST00000379331 SYNJ2O15056 1496 aa21.4■■□□□ 1.02
PRDX4-201ENST00000379331 SYNJ1O43426 1573 aa21.38■■□□□ 1.01
PRDX4-201ENST00000379331 GAPVD1Q14C86 1478 aa21.37■■□□□ 1.01
PRDX4-201ENST00000379331 ABCA10Q8WWZ4 1543 aa21.35■■□□□ 1.01
PRDX4-201ENST00000379331 SUPT5HO00267 1087 aaKnown RBP21.35■■□□□ 1.01
PRDX4-201ENST00000379331 TRHP20396 242 aaPredicted RBP21.34■■□□□ 1.01
PRDX4-201ENST00000379331 ABCA5Q8WWZ7 1642 aa21.32■■□□□ 1
PRDX4-201ENST00000379331 PBRM1Q86U86 1689 aa21.31■■□□□ 1
PRDX4-201ENST00000379331 WRNQ14191 1432 aaPredicted RBP eCLIP21.23■□□□□ 0.99
PRDX4-201ENST00000379331 GRIN2AQ12879 1464 aa21.19■□□□□ 0.98
PRDX4-201ENST00000379331 TOP2BQ02880 1626 aa21.18■□□□□ 0.98
PRDX4-201ENST00000379331 BIVM-ERCC5R4GMW8 1640 aa21.17■□□□□ 0.98
PRDX4-201ENST00000379331 ADAMTS12P58397 1594 aa21.15■□□□□ 0.98
PRDX4-201ENST00000379331 NUP160Q12769 1436 aa21.15■□□□□ 0.98
PRDX4-201ENST00000379331 ERCC6L2Q5T890 1561 aa21.14■□□□□ 0.97
PRDX4-201ENST00000379331 CEP170Q5SW79 1584 aa21.12■□□□□ 0.97
PRDX4-201ENST00000379331 FHAD1B1AJZ9 1412 aa21.11■□□□□ 0.97
PRDX4-201ENST00000379331 ERICH3Q5RHP9 1530 aa21.06■□□□□ 0.96
PRDX4-201ENST00000379331 SHROOM2Q13796 1616 aa21.04■□□□□ 0.96
PRDX4-201ENST00000379331 PRG4Q92954 1404 aaPredicted RBP20.93■□□□□ 0.94
PRDX4-201ENST00000379331 JPH4Q96JJ6 628 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms