RNA–Protein interactions for RNA: ENST00000377919.6

KRBOX4-203, Transcript of KRAB box domain containing 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene KRBOX4, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRBOX4-203ENST00000377919 NISCHQ9Y2I1 1504 aa30.5■■■□□ 2.47
KRBOX4-203ENST00000377919 CCDC180Q9P1Z9 1646 aa27.3■■□□□ 1.96
KRBOX4-203ENST00000377919 ABCC9O60706 1549 aa26.6■■□□□ 1.85
KRBOX4-203ENST00000377919 RB1CC1Q8TDY2 1594 aa25.61■■□□□ 1.69
KRBOX4-203ENST00000377919 NACADO15069 1562 aa25.53■■□□□ 1.68
KRBOX4-203ENST00000377919 ZCCHC6Q5VYS8 1495 aaKnown RBP25.45■■□□□ 1.66
KRBOX4-203ENST00000377919 MYO15BQ96JP2 1530 aa25.32■■□□□ 1.64
KRBOX4-203ENST00000377919 DCAF8L2P0C7V8 631 aa25.3■■□□□ 1.64
KRBOX4-203ENST00000377919 UNC13AQ9UPW8 1703 aa25.29■■□□□ 1.64
KRBOX4-203ENST00000377919 DCAF1Q9Y4B6 1507 aa25.23■■□□□ 1.63
KRBOX4-203ENST00000377919 SCRIBQ14160 1630 aa24.9■■□□□ 1.58
KRBOX4-203ENST00000377919 BICRAQ9NZM4 1560 aa24.88■■□□□ 1.57
KRBOX4-203ENST00000377919 PABPN1Q86U42 306 aaKnown RBP eCLIP24.72■■□□□ 1.55
KRBOX4-203ENST00000377919 SHROOM4Q9ULL8 1493 aa24.52■■□□□ 1.52
KRBOX4-203ENST00000377919 DNAJC5BQ9UF47 199 aa24.3■■□□□ 1.48
KRBOX4-203ENST00000377919 EIF4G1Q04637 1599 aaKnown RBP24.2■■□□□ 1.47
KRBOX4-203ENST00000377919 CC2D2AQ9P2K1 1620 aa24.13■■□□□ 1.45
KRBOX4-203ENST00000377919 CECR2Q9BXF3 1484 aa23.87■■□□□ 1.41
KRBOX4-203ENST00000377919 SMARCA4P51532 1647 aa23.77■■□□□ 1.4
KRBOX4-203ENST00000377919 BAZ1AQ9NRL2 1556 aaPredicted RBP23.67■■□□□ 1.38
KRBOX4-203ENST00000377919 SMARCA2P51531 1590 aa23.54■■□□□ 1.36
KRBOX4-203ENST00000377919 MROH2BQ7Z745 1585 aa23.53■■□□□ 1.36
KRBOX4-203ENST00000377919 ATAD2BQ9ULI0 1458 aa23.53■■□□□ 1.36
KRBOX4-203ENST00000377919 PEG3Q9GZU2 1588 aa23.5■■□□□ 1.35
KRBOX4-203ENST00000377919 HMGXB3Q12766 1538 aa23.49■■□□□ 1.35
KRBOX4-203ENST00000377919 NCAPD3P42695 1498 aa23.47■■□□□ 1.35
KRBOX4-203ENST00000377919 WIZO95785 1651 aa23.38■■□□□ 1.33
KRBOX4-203ENST00000377919 BAZ1BQ9UIG0 1483 aaKnown RBP23.36■■□□□ 1.33
KRBOX4-203ENST00000377919 RSF1Q96T23 1441 aaPredicted RBP23.16■■□□□ 1.3
KRBOX4-203ENST00000377919 TOP2AP11388 1531 aaKnown RBP23.07■■□□□ 1.28
KRBOX4-203ENST00000377919 NESP48681 1621 aa23.03■■□□□ 1.28
KRBOX4-203ENST00000377919 LAMC3Q9Y6N6 1575 aa22.99■■□□□ 1.27
KRBOX4-203ENST00000377919 KIF21AQ7Z4S6 1674 aa22.93■■□□□ 1.26
KRBOX4-203ENST00000377919 ERCC6Q03468 1493 aa22.91■■□□□ 1.26
KRBOX4-203ENST00000377919 PRDM2Q13029 1718 aa22.84■■□□□ 1.25
KRBOX4-203ENST00000377919 THOC2Q8NI27 1593 aaKnown RBP22.81■■□□□ 1.24
KRBOX4-203ENST00000377919 CADPSQ9ULU8 1353 aa22.76■■□□□ 1.23
KRBOX4-203ENST00000377919 CCDC88BA6NC98 1476 aa22.7■■□□□ 1.22
KRBOX4-203ENST00000377919 PDS5BQ9NTI5 1447 aa22.69■■□□□ 1.22
KRBOX4-203ENST00000377919 CUX2O14529 1486 aa22.67■■□□□ 1.22
KRBOX4-203ENST00000377919 CFTRP13569 1480 aa22.67■■□□□ 1.22
KRBOX4-203ENST00000377919 CEP164Q9UPV0 1460 aa22.6■■□□□ 1.21
KRBOX4-203ENST00000377919 FANCD2Q9BXW9 1451 aa22.59■■□□□ 1.21
KRBOX4-203ENST00000377919 MRC2Q9UBG0 1479 aa22.55■■□□□ 1.2
KRBOX4-203ENST00000377919 WDR62O43379 1518 aa22.54■■□□□ 1.2
KRBOX4-203ENST00000377919 SUPT5HO00267 1087 aaKnown RBP22.46■■□□□ 1.19
KRBOX4-203ENST00000377919 URB2Q14146 1524 aaKnown RBP22.41■■□□□ 1.18
KRBOX4-203ENST00000377919 DNMBPQ6XZF7 1577 aa22.27■■□□□ 1.16
KRBOX4-203ENST00000377919 TOPBP1Q92547 1522 aa22.26■■□□□ 1.15
KRBOX4-203ENST00000377919 ABCC8Q09428 1581 aa22.16■■□□□ 1.14
KRBOX4-203ENST00000377919 CUX1P39880 1505 aa22.11■■□□□ 1.13
KRBOX4-203ENST00000377919 TARBP1Q13395 1621 aaKnown RBP22.09■■□□□ 1.13
KRBOX4-203ENST00000377919 IFT140Q96RY7 1462 aa22.07■■□□□ 1.12
KRBOX4-203ENST00000377919 EIF4G3O43432 1585 aaKnown RBP22.07■■□□□ 1.12
KRBOX4-203ENST00000377919 POLA1P09884 1462 aaPredicted RBP22.05■■□□□ 1.12
KRBOX4-203ENST00000377919 WDR97A6NE52 1622 aa22.02■■□□□ 1.12
KRBOX4-203ENST00000377919 ZNF608Q9ULD9 1512 aaPredicted RBP22.02■■□□□ 1.12
KRBOX4-203ENST00000377919 FGD5Q6ZNL6 1462 aa22.01■■□□□ 1.11
KRBOX4-203ENST00000377919 BIVM-ERCC5R4GMW8 1640 aa21.99■■□□□ 1.11
KRBOX4-203ENST00000377919 SYNJ1O43426 1573 aa21.96■■□□□ 1.11
KRBOX4-203ENST00000377919 RAD54L2Q9Y4B4 1467 aa21.94■■□□□ 1.1
KRBOX4-203ENST00000377919 TOP2BQ02880 1626 aa21.93■■□□□ 1.1
KRBOX4-203ENST00000377919 PBRM1Q86U86 1689 aa21.88■■□□□ 1.09
KRBOX4-203ENST00000377919 CHD1O14646 1710 aa21.86■■□□□ 1.09
KRBOX4-203ENST00000377919 SOGA1O94964 1423 aa21.86■■□□□ 1.09
KRBOX4-203ENST00000377919 WRNQ14191 1432 aaPredicted RBP eCLIP21.86■■□□□ 1.09
KRBOX4-203ENST00000377919 DNAJC5Q9H3Z4 198 aa21.85■■□□□ 1.09
KRBOX4-203ENST00000377919 AQRO60306 1485 aaKnown RBP eCLIP21.83■■□□□ 1.08
KRBOX4-203ENST00000377919 ABCA5Q8WWZ7 1642 aa21.81■■□□□ 1.08
KRBOX4-203ENST00000377919 ABCA10Q8WWZ4 1543 aa21.76■■□□□ 1.07
KRBOX4-203ENST00000377919 TDRD9Q8NDG6 1382 aaKnown RBP21.74■■□□□ 1.07
KRBOX4-203ENST00000377919 SNAPC4Q5SXM2 1469 aa21.71■■□□□ 1.07
KRBOX4-203ENST00000377919 GRIN2BQ13224 1484 aa21.66■■□□□ 1.06
KRBOX4-203ENST00000377919 GAPVD1Q14C86 1478 aa21.66■■□□□ 1.06
KRBOX4-203ENST00000377919 MAGI1Q96QZ7 1491 aaPredicted RBP21.64■■□□□ 1.06
KRBOX4-203ENST00000377919 ADAMTS12P58397 1594 aa21.61■■□□□ 1.05
KRBOX4-203ENST00000377919 SYNJ2O15056 1496 aa21.55■■□□□ 1.04
KRBOX4-203ENST00000377919 OSCARQ8IYS5 282 aa21.54■■□□□ 1.04
KRBOX4-203ENST00000377919 ERICH3Q5RHP9 1530 aa21.52■■□□□ 1.04
KRBOX4-203ENST00000377919 RIMBP3CA6NJZ7 1639 aa21.51■■□□□ 1.03
KRBOX4-203ENST00000377919 RIMBP3BA6NNM3 1639 aa21.51■■□□□ 1.03
KRBOX4-203ENST00000377919 RIMBP3Q9UFD9 1639 aa21.51■■□□□ 1.03
KRBOX4-203ENST00000377919 CLASP1Q7Z460 1538 aa21.5■■□□□ 1.03
KRBOX4-203ENST00000377919 FBLN2P98095 1184 aa21.49■■□□□ 1.03
KRBOX4-203ENST00000377919 GRIN2AQ12879 1464 aa21.43■■□□□ 1.02
KRBOX4-203ENST00000377919 ARHGEF11O15085 1522 aa21.43■■□□□ 1.02
KRBOX4-203ENST00000377919 CUL7Q14999 1698 aa21.43■■□□□ 1.02
KRBOX4-203ENST00000377919 CEP170Q5SW79 1584 aa21.41■■□□□ 1.02
KRBOX4-203ENST00000377919 CHMP7Q8WUX9 453 aaPredicted RBP21.4■■□□□ 1.02
KRBOX4-203ENST00000377919 FHAD1B1AJZ9 1412 aa21.38■■□□□ 1.01
KRBOX4-203ENST00000377919 KIF27Q86VH2 1401 aa21.37■■□□□ 1.01
KRBOX4-203ENST00000377919 RUSC2Q8N2Y8 1516 aa21.31■■□□□ 1
KRBOX4-203ENST00000377919 NUP160Q12769 1436 aa21.3■■□□□ 1
KRBOX4-203ENST00000377919 SHROOM2Q13796 1616 aa21.28■■□□□ 1
KRBOX4-203ENST00000377919 ARAP1Q96P48 1450 aa21.26■□□□□ 0.99
KRBOX4-203ENST00000377919 IGF1RP08069 1367 aa21.23■□□□□ 0.99
KRBOX4-203ENST00000377919 ERCC6L2Q5T890 1561 aa21.21■□□□□ 0.99
KRBOX4-203ENST00000377919 TRIM41Q8WV44 630 aa21.2■□□□□ 0.98
KRBOX4-203ENST00000377919 CTTNBP2Q8WZ74 1663 aa21.13■□□□□ 0.97
KRBOX4-203ENST00000377919 CARMIL1Q5VZK9 1371 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms