RNA–Protein interactions for RNA: ENST00000376434.5

FRMD3-203, Transcript of FERM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene FRMD3, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD3-203ENST00000376434 AEBP2Q6ZN18 517 aaPredicted RBP24.68■■□□□ 1.54
FRMD3-203ENST00000376434 NISCHQ9Y2I1 1504 aa23.69■■□□□ 1.38
FRMD3-203ENST00000376434 CHIC1Q5VXU3 224 aa23.47■■□□□ 1.35
FRMD3-203ENST00000376434 CCDC180Q9P1Z9 1646 aa21.34■■□□□ 1.01
FRMD3-203ENST00000376434 ABCC9O60706 1549 aa21.16■□□□□ 0.98
FRMD3-203ENST00000376434 SENP3Q9H4L4 574 aaPredicted RBP21■□□□□ 0.95
FRMD3-203ENST00000376434 PHF23Q9BUL5 403 aaPredicted RBP20.74■□□□□ 0.91
FRMD3-203ENST00000376434 RB1CC1Q8TDY2 1594 aa20.23■□□□□ 0.83
FRMD3-203ENST00000376434 NACADO15069 1562 aa20.12■□□□□ 0.81
FRMD3-203ENST00000376434 MYO15BQ96JP2 1530 aa19.96■□□□□ 0.79
FRMD3-203ENST00000376434 DNAJC5BQ9UF47 199 aa19.91■□□□□ 0.78
FRMD3-203ENST00000376434 UNC13AQ9UPW8 1703 aa19.84■□□□□ 0.77
FRMD3-203ENST00000376434 BICRAQ9NZM4 1560 aa19.73■□□□□ 0.75
FRMD3-203ENST00000376434 ZCCHC6Q5VYS8 1495 aaKnown RBP19.67■□□□□ 0.74
FRMD3-203ENST00000376434 DCAF1Q9Y4B6 1507 aa19.67■□□□□ 0.74
FRMD3-203ENST00000376434 DCAF8L2P0C7V8 631 aa19.65■□□□□ 0.74
FRMD3-203ENST00000376434 PABPN1Q86U42 306 aaKnown RBP eCLIP19.62■□□□□ 0.73
FRMD3-203ENST00000376434 FOXD1Q16676 465 aa19.59■□□□□ 0.73
FRMD3-203ENST00000376434 SHROOM4Q9ULL8 1493 aa19.51■□□□□ 0.71
FRMD3-203ENST00000376434 SCRIBQ14160 1630 aa19.29■□□□□ 0.68
FRMD3-203ENST00000376434 CC2D2AQ9P2K1 1620 aa19.21■□□□□ 0.67
FRMD3-203ENST00000376434 EIF4G1Q04637 1599 aaKnown RBP19.19■□□□□ 0.66
FRMD3-203ENST00000376434 CECR2Q9BXF3 1484 aa19.1■□□□□ 0.65
FRMD3-203ENST00000376434 PLPPR3Q6T4P5 718 aa18.76■□□□□ 0.59
FRMD3-203ENST00000376434 NCAPD3P42695 1498 aa18.6■□□□□ 0.57
FRMD3-203ENST00000376434 ATAD2BQ9ULI0 1458 aa18.49■□□□□ 0.55
FRMD3-203ENST00000376434 SMARCA4P51532 1647 aa18.49■□□□□ 0.55
FRMD3-203ENST00000376434 HMGXB3Q12766 1538 aa18.47■□□□□ 0.55
FRMD3-203ENST00000376434 SMARCA2P51531 1590 aa18.44■□□□□ 0.54
FRMD3-203ENST00000376434 PEG3Q9GZU2 1588 aa18.41■□□□□ 0.54
FRMD3-203ENST00000376434 PPP6R1Q9UPN7 881 aa18.38■□□□□ 0.53
FRMD3-203ENST00000376434 BAZ1AQ9NRL2 1556 aaPredicted RBP18.38■□□□□ 0.53
FRMD3-203ENST00000376434 CUX2O14529 1486 aa18.36■□□□□ 0.53
FRMD3-203ENST00000376434 ADRA2BP18089 450 aa18.32■□□□□ 0.52
FRMD3-203ENST00000376434 PIAS4Q8N2W9 510 aaPredicted RBP18.32■□□□□ 0.52
FRMD3-203ENST00000376434 DNAJC5Q9H3Z4 198 aa18.3■□□□□ 0.52
FRMD3-203ENST00000376434 MSH5O43196 834 aa18.28■□□□□ 0.52
FRMD3-203ENST00000376434 BAZ1BQ9UIG0 1483 aaKnown RBP18.26■□□□□ 0.51
FRMD3-203ENST00000376434 MROH2BQ7Z745 1585 aa18.23■□□□□ 0.51
FRMD3-203ENST00000376434 ERCC6Q03468 1493 aa18.23■□□□□ 0.51
FRMD3-203ENST00000376434 NESP48681 1621 aa18.22■□□□□ 0.51
FRMD3-203ENST00000376434 LAMC3Q9Y6N6 1575 aa18.17■□□□□ 0.5
FRMD3-203ENST00000376434 THOC2Q8NI27 1593 aaKnown RBP18.14■□□□□ 0.49
FRMD3-203ENST00000376434 KIF21AQ7Z4S6 1674 aa18.03■□□□□ 0.48
FRMD3-203ENST00000376434 WIZO95785 1651 aa17.99■□□□□ 0.47
FRMD3-203ENST00000376434 PDS5BQ9NTI5 1447 aa17.98■□□□□ 0.47
FRMD3-203ENST00000376434 CADPSQ9ULU8 1353 aa17.96■□□□□ 0.47
FRMD3-203ENST00000376434 WDR62O43379 1518 aa17.89■□□□□ 0.45
FRMD3-203ENST00000376434 MRC2Q9UBG0 1479 aa17.86■□□□□ 0.45
FRMD3-203ENST00000376434 RSF1Q96T23 1441 aaPredicted RBP17.84■□□□□ 0.45
FRMD3-203ENST00000376434 CFTRP13569 1480 aa17.81■□□□□ 0.44
FRMD3-203ENST00000376434 TOP2AP11388 1531 aaKnown RBP17.8■□□□□ 0.44
FRMD3-203ENST00000376434 POTEDQ86YR6 584 aa17.76■□□□□ 0.43
FRMD3-203ENST00000376434 CEP164Q9UPV0 1460 aa17.75■□□□□ 0.43
FRMD3-203ENST00000376434 FANCD2Q9BXW9 1451 aa17.74■□□□□ 0.43
FRMD3-203ENST00000376434 SUPT5HO00267 1087 aaKnown RBP17.67■□□□□ 0.42
FRMD3-203ENST00000376434 PRDM2Q13029 1718 aa17.66■□□□□ 0.42
FRMD3-203ENST00000376434 URB2Q14146 1524 aaKnown RBP17.64■□□□□ 0.41
FRMD3-203ENST00000376434 CCDC88BA6NC98 1476 aa17.55■□□□□ 0.4
FRMD3-203ENST00000376434 TOPBP1Q92547 1522 aa17.43■□□□□ 0.38
FRMD3-203ENST00000376434 IFT140Q96RY7 1462 aa17.43■□□□□ 0.38
FRMD3-203ENST00000376434 ABCC8Q09428 1581 aa17.39■□□□□ 0.37
FRMD3-203ENST00000376434 ZNF608Q9ULD9 1512 aaPredicted RBP17.39■□□□□ 0.37
FRMD3-203ENST00000376434 DNMBPQ6XZF7 1577 aa17.39■□□□□ 0.37
FRMD3-203ENST00000376434 OSCARQ8IYS5 282 aa17.38■□□□□ 0.37
FRMD3-203ENST00000376434 TARBP1Q13395 1621 aaKnown RBP17.34■□□□□ 0.37
FRMD3-203ENST00000376434 EIF4G3O43432 1585 aaKnown RBP17.33■□□□□ 0.36
FRMD3-203ENST00000376434 TRIM41Q8WV44 630 aa17.28■□□□□ 0.36
FRMD3-203ENST00000376434 RIMBP3CA6NJZ7 1639 aa17.26■□□□□ 0.35
FRMD3-203ENST00000376434 RIMBP3BA6NNM3 1639 aa17.26■□□□□ 0.35
FRMD3-203ENST00000376434 RIMBP3Q9UFD9 1639 aa17.26■□□□□ 0.35
FRMD3-203ENST00000376434 POLA1P09884 1462 aaPredicted RBP17.26■□□□□ 0.35
FRMD3-203ENST00000376434 ARHGEF11O15085 1522 aa17.2■□□□□ 0.34
FRMD3-203ENST00000376434 WDR97A6NE52 1622 aa17.2■□□□□ 0.34
FRMD3-203ENST00000376434 AQRO60306 1485 aaKnown RBP eCLIP17.19■□□□□ 0.34
FRMD3-203ENST00000376434 CHD1O14646 1710 aa17.18■□□□□ 0.34
FRMD3-203ENST00000376434 RAD54L2Q9Y4B4 1467 aa17.14■□□□□ 0.33
FRMD3-203ENST00000376434 CUX1P39880 1505 aa17.13■□□□□ 0.33
FRMD3-203ENST00000376434 FGD5Q6ZNL6 1462 aa17.11■□□□□ 0.33
FRMD3-203ENST00000376434 SOGA1O94964 1423 aa17.1■□□□□ 0.33
FRMD3-203ENST00000376434 CLASP1Q7Z460 1538 aa17.06■□□□□ 0.32
FRMD3-203ENST00000376434 TDRD9Q8NDG6 1382 aaKnown RBP17.05■□□□□ 0.32
FRMD3-203ENST00000376434 ARAP1Q96P48 1450 aa17.05■□□□□ 0.32
FRMD3-203ENST00000376434 SNAPC4Q5SXM2 1469 aa17.04■□□□□ 0.32
FRMD3-203ENST00000376434 MAGI1Q96QZ7 1491 aaPredicted RBP17.04■□□□□ 0.32
FRMD3-203ENST00000376434 GRIN2BQ13224 1484 aa17■□□□□ 0.31
FRMD3-203ENST00000376434 ABCA5Q8WWZ7 1642 aa16.98■□□□□ 0.31
FRMD3-203ENST00000376434 ABCA10Q8WWZ4 1543 aa16.98■□□□□ 0.31
FRMD3-203ENST00000376434 SYNJ2O15056 1496 aa16.97■□□□□ 0.31
FRMD3-203ENST00000376434 PBRM1Q86U86 1689 aa16.97■□□□□ 0.31
FRMD3-203ENST00000376434 SYNJ1O43426 1573 aa16.96■□□□□ 0.31
FRMD3-203ENST00000376434 GAPVD1Q14C86 1478 aa16.93■□□□□ 0.3
FRMD3-203ENST00000376434 CYB5RLQ6IPT4 315 aa16.9■□□□□ 0.3
FRMD3-203ENST00000376434 BIVM-ERCC5R4GMW8 1640 aa16.9■□□□□ 0.3
FRMD3-203ENST00000376434 FBLN2P98095 1184 aa16.89■□□□□ 0.3
FRMD3-203ENST00000376434 TOP2BQ02880 1626 aa16.88■□□□□ 0.29
FRMD3-203ENST00000376434 CHMP7Q8WUX9 453 aaPredicted RBP16.85■□□□□ 0.29
FRMD3-203ENST00000376434 ADAMTS12P58397 1594 aa16.83■□□□□ 0.28
FRMD3-203ENST00000376434 WRNQ14191 1432 aaPredicted RBP eCLIP16.82■□□□□ 0.28
FRMD3-203ENST00000376434 MAPK8IP2Q13387 824 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms