RNA–Protein interactions for RNA: ENST00000375469.5

SUSD3-201, Transcript of sushi domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SUSD3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-201ENST00000375469 AEBP2Q6ZN18 517 aaPredicted RBP32.42■■■□□ 2.78
SUSD3-201ENST00000375469 CHIC1Q5VXU3 224 aa30.85■■■□□ 2.53
SUSD3-201ENST00000375469 NISCHQ9Y2I1 1504 aa30.52■■■□□ 2.48
SUSD3-201ENST00000375469 SENP3Q9H4L4 574 aaPredicted RBP27.78■■■□□ 2.04
SUSD3-201ENST00000375469 PHF23Q9BUL5 403 aaPredicted RBP27.38■■□□□ 1.97
SUSD3-201ENST00000375469 CCDC180Q9P1Z9 1646 aa27.23■■□□□ 1.95
SUSD3-201ENST00000375469 ABCC9O60706 1549 aa27.21■■□□□ 1.95
SUSD3-201ENST00000375469 RB1CC1Q8TDY2 1594 aa25.93■■□□□ 1.74
SUSD3-201ENST00000375469 DCAF8L2P0C7V8 631 aa25.87■■□□□ 1.73
SUSD3-201ENST00000375469 FOXD1Q16676 465 aa25.82■■□□□ 1.72
SUSD3-201ENST00000375469 NACADO15069 1562 aa25.8■■□□□ 1.72
SUSD3-201ENST00000375469 MYO15BQ96JP2 1530 aa25.5■■□□□ 1.67
SUSD3-201ENST00000375469 DNAJC5BQ9UF47 199 aa25.47■■□□□ 1.67
SUSD3-201ENST00000375469 PABPN1Q86U42 306 aaKnown RBP eCLIP25.44■■□□□ 1.66
SUSD3-201ENST00000375469 ZCCHC6Q5VYS8 1495 aaKnown RBP25.3■■□□□ 1.64
SUSD3-201ENST00000375469 DCAF1Q9Y4B6 1507 aa25.21■■□□□ 1.63
SUSD3-201ENST00000375469 UNC13AQ9UPW8 1703 aa25.19■■□□□ 1.62
SUSD3-201ENST00000375469 BICRAQ9NZM4 1560 aa25.14■■□□□ 1.61
SUSD3-201ENST00000375469 SCRIBQ14160 1630 aa24.86■■□□□ 1.57
SUSD3-201ENST00000375469 SHROOM4Q9ULL8 1493 aa24.85■■□□□ 1.57
SUSD3-201ENST00000375469 PLPPR3Q6T4P5 718 aa24.71■■□□□ 1.55
SUSD3-201ENST00000375469 CC2D2AQ9P2K1 1620 aa24.53■■□□□ 1.52
SUSD3-201ENST00000375469 EIF4G1Q04637 1599 aaKnown RBP24.53■■□□□ 1.52
SUSD3-201ENST00000375469 CECR2Q9BXF3 1484 aa24.51■■□□□ 1.51
SUSD3-201ENST00000375469 MSH5O43196 834 aa24.26■■□□□ 1.47
SUSD3-201ENST00000375469 PIAS4Q8N2W9 510 aaPredicted RBP24.21■■□□□ 1.47
SUSD3-201ENST00000375469 PPP6R1Q9UPN7 881 aa24.09■■□□□ 1.45
SUSD3-201ENST00000375469 ADRA2BP18089 450 aa24.07■■□□□ 1.44
SUSD3-201ENST00000375469 NCAPD3P42695 1498 aa23.87■■□□□ 1.41
SUSD3-201ENST00000375469 ATAD2BQ9ULI0 1458 aa23.79■■□□□ 1.4
SUSD3-201ENST00000375469 SMARCA4P51532 1647 aa23.73■■□□□ 1.39
SUSD3-201ENST00000375469 SMARCA2P51531 1590 aa23.71■■□□□ 1.39
SUSD3-201ENST00000375469 BAZ1AQ9NRL2 1556 aaPredicted RBP23.67■■□□□ 1.38
SUSD3-201ENST00000375469 HMGXB3Q12766 1538 aa23.63■■□□□ 1.37
SUSD3-201ENST00000375469 POTEDQ86YR6 584 aa23.62■■□□□ 1.37
SUSD3-201ENST00000375469 BAZ1BQ9UIG0 1483 aaKnown RBP23.56■■□□□ 1.36
SUSD3-201ENST00000375469 PEG3Q9GZU2 1588 aa23.52■■□□□ 1.36
SUSD3-201ENST00000375469 MROH2BQ7Z745 1585 aa23.51■■□□□ 1.35
SUSD3-201ENST00000375469 ERCC6Q03468 1493 aa23.5■■□□□ 1.35
SUSD3-201ENST00000375469 NESP48681 1621 aa23.4■■□□□ 1.34
SUSD3-201ENST00000375469 CUX2O14529 1486 aa23.39■■□□□ 1.34
SUSD3-201ENST00000375469 DNAJC5Q9H3Z4 198 aa23.32■■□□□ 1.32
SUSD3-201ENST00000375469 LAMC3Q9Y6N6 1575 aa23.24■■□□□ 1.31
SUSD3-201ENST00000375469 WIZO95785 1651 aa23.19■■□□□ 1.3
SUSD3-201ENST00000375469 PDS5BQ9NTI5 1447 aa23.18■■□□□ 1.3
SUSD3-201ENST00000375469 CADPSQ9ULU8 1353 aa23.17■■□□□ 1.3
SUSD3-201ENST00000375469 RSF1Q96T23 1441 aaPredicted RBP23.12■■□□□ 1.29
SUSD3-201ENST00000375469 THOC2Q8NI27 1593 aaKnown RBP23.06■■□□□ 1.28
SUSD3-201ENST00000375469 KIF21AQ7Z4S6 1674 aa23■■□□□ 1.27
SUSD3-201ENST00000375469 TOP2AP11388 1531 aaKnown RBP22.93■■□□□ 1.26
SUSD3-201ENST00000375469 MRC2Q9UBG0 1479 aa22.92■■□□□ 1.26
SUSD3-201ENST00000375469 CFTRP13569 1480 aa22.9■■□□□ 1.26
SUSD3-201ENST00000375469 FANCD2Q9BXW9 1451 aa22.85■■□□□ 1.25
SUSD3-201ENST00000375469 CEP164Q9UPV0 1460 aa22.85■■□□□ 1.25
SUSD3-201ENST00000375469 WDR62O43379 1518 aa22.82■■□□□ 1.24
SUSD3-201ENST00000375469 CCDC88BA6NC98 1476 aa22.73■■□□□ 1.23
SUSD3-201ENST00000375469 URB2Q14146 1524 aaKnown RBP22.63■■□□□ 1.21
SUSD3-201ENST00000375469 PRDM2Q13029 1718 aa22.49■■□□□ 1.19
SUSD3-201ENST00000375469 OSCARQ8IYS5 282 aa22.47■■□□□ 1.19
SUSD3-201ENST00000375469 ABCC8Q09428 1581 aa22.43■■□□□ 1.18
SUSD3-201ENST00000375469 TOPBP1Q92547 1522 aa22.42■■□□□ 1.18
SUSD3-201ENST00000375469 IFT140Q96RY7 1462 aa22.42■■□□□ 1.18
SUSD3-201ENST00000375469 TRIM41Q8WV44 630 aa22.35■■□□□ 1.17
SUSD3-201ENST00000375469 ZNF608Q9ULD9 1512 aaPredicted RBP22.35■■□□□ 1.17
SUSD3-201ENST00000375469 DNMBPQ6XZF7 1577 aa22.33■■□□□ 1.16
SUSD3-201ENST00000375469 SUPT5HO00267 1087 aaKnown RBP22.29■■□□□ 1.16
SUSD3-201ENST00000375469 AQRO60306 1485 aaKnown RBP eCLIP22.21■■□□□ 1.15
SUSD3-201ENST00000375469 POLA1P09884 1462 aaPredicted RBP22.21■■□□□ 1.15
SUSD3-201ENST00000375469 SOGA1O94964 1423 aa22.18■■□□□ 1.14
SUSD3-201ENST00000375469 TARBP1Q13395 1621 aaKnown RBP22.17■■□□□ 1.14
SUSD3-201ENST00000375469 EIF4G3O43432 1585 aaKnown RBP22.16■■□□□ 1.14
SUSD3-201ENST00000375469 SCAF1Q9H7N4 1312 aaKnown RBP22.15■■□□□ 1.14
SUSD3-201ENST00000375469 RAD54L2Q9Y4B4 1467 aa22.15■■□□□ 1.14
SUSD3-201ENST00000375469 TDRD9Q8NDG6 1382 aaKnown RBP22.12■■□□□ 1.13
SUSD3-201ENST00000375469 FBLN2P98095 1184 aa22.11■■□□□ 1.13
SUSD3-201ENST00000375469 MAPK8IP2Q13387 824 aaPredicted RBP22.09■■□□□ 1.13
SUSD3-201ENST00000375469 FGD5Q6ZNL6 1462 aa22.09■■□□□ 1.13
SUSD3-201ENST00000375469 CUX1P39880 1505 aa22.07■■□□□ 1.12
SUSD3-201ENST00000375469 RIMBP3CA6NJZ7 1639 aa21.98■■□□□ 1.11
SUSD3-201ENST00000375469 RIMBP3BA6NNM3 1639 aa21.98■■□□□ 1.11
SUSD3-201ENST00000375469 RIMBP3Q9UFD9 1639 aa21.98■■□□□ 1.11
SUSD3-201ENST00000375469 DMRT2Q9Y5R5 561 aa21.98■■□□□ 1.11
SUSD3-201ENST00000375469 ARHGEF11O15085 1522 aa21.97■■□□□ 1.11
SUSD3-201ENST00000375469 CHMP7Q8WUX9 453 aaPredicted RBP21.97■■□□□ 1.11
SUSD3-201ENST00000375469 WDR97A6NE52 1622 aa21.96■■□□□ 1.11
SUSD3-201ENST00000375469 SNAPC4Q5SXM2 1469 aa21.94■■□□□ 1.1
SUSD3-201ENST00000375469 CHD1O14646 1710 aa21.93■■□□□ 1.1
SUSD3-201ENST00000375469 GRIN2BQ13224 1484 aa21.93■■□□□ 1.1
SUSD3-201ENST00000375469 CYB5RLQ6IPT4 315 aa21.92■■□□□ 1.1
SUSD3-201ENST00000375469 MAGI1Q96QZ7 1491 aaPredicted RBP21.9■■□□□ 1.1
SUSD3-201ENST00000375469 GAPVD1Q14C86 1478 aa21.88■■□□□ 1.09
SUSD3-201ENST00000375469 ABCA10Q8WWZ4 1543 aa21.85■■□□□ 1.09
SUSD3-201ENST00000375469 WRNQ14191 1432 aaPredicted RBP eCLIP21.84■■□□□ 1.09
SUSD3-201ENST00000375469 SYNJ2O15056 1496 aa21.83■■□□□ 1.09
SUSD3-201ENST00000375469 SYNJ1O43426 1573 aa21.78■■□□□ 1.08
SUSD3-201ENST00000375469 ARAP1Q96P48 1450 aa21.76■■□□□ 1.07
SUSD3-201ENST00000375469 CLASP1Q7Z460 1538 aa21.75■■□□□ 1.07
SUSD3-201ENST00000375469 TOP2BQ02880 1626 aa21.74■■□□□ 1.07
SUSD3-201ENST00000375469 ABCA5Q8WWZ7 1642 aa21.73■■□□□ 1.07
SUSD3-201ENST00000375469 PBRM1Q86U86 1689 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms