RNA–Protein interactions for RNA: ENST00000374133.3

GPN2-201, Transcript of GPN-loop GTPase 2, humanhuman

TSL 3 BASIC

Gene GPN2, Length 715 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN2-201ENST00000374133 NISCHQ9Y2I1 1504 aa20.48■□□□□ 0.87
GPN2-201ENST00000374133 ABCC9O60706 1549 aa18.97■□□□□ 0.63
GPN2-201ENST00000374133 CCDC180Q9P1Z9 1646 aa18.67■□□□□ 0.58
GPN2-201ENST00000374133 DNAJC5BQ9UF47 199 aa18.18■□□□□ 0.5
GPN2-201ENST00000374133 AEBP2Q6ZN18 517 aaPredicted RBP18.14■□□□□ 0.49
GPN2-201ENST00000374133 RB1CC1Q8TDY2 1594 aa17.96■□□□□ 0.47
GPN2-201ENST00000374133 NACADO15069 1562 aa17.74■□□□□ 0.43
GPN2-201ENST00000374133 UNC13AQ9UPW8 1703 aa17.56■□□□□ 0.4
GPN2-201ENST00000374133 PABPN1Q86U42 306 aaKnown RBP eCLIP17.52■□□□□ 0.4
GPN2-201ENST00000374133 BICRAQ9NZM4 1560 aa17.43■□□□□ 0.38
GPN2-201ENST00000374133 MYO15BQ96JP2 1530 aa17.39■□□□□ 0.37
GPN2-201ENST00000374133 DCAF8L2P0C7V8 631 aa17.3■□□□□ 0.36
GPN2-201ENST00000374133 SHROOM4Q9ULL8 1493 aa17.26■□□□□ 0.35
GPN2-201ENST00000374133 CECR2Q9BXF3 1484 aa17.18■□□□□ 0.34
GPN2-201ENST00000374133 CC2D2AQ9P2K1 1620 aa17.18■□□□□ 0.34
GPN2-201ENST00000374133 DNAJC5Q9H3Z4 198 aa17.12■□□□□ 0.33
GPN2-201ENST00000374133 EIF4G1Q04637 1599 aaKnown RBP17.04■□□□□ 0.32
GPN2-201ENST00000374133 DCAF1Q9Y4B6 1507 aa16.96■□□□□ 0.31
GPN2-201ENST00000374133 CHIC1Q5VXU3 224 aa16.89■□□□□ 0.29
GPN2-201ENST00000374133 ZCCHC6Q5VYS8 1495 aaKnown RBP16.88■□□□□ 0.29
GPN2-201ENST00000374133 SCRIBQ14160 1630 aa16.85■□□□□ 0.29
GPN2-201ENST00000374133 CUX2O14529 1486 aa16.67■□□□□ 0.26
GPN2-201ENST00000374133 ERCC6Q03468 1493 aa16.45■□□□□ 0.22
GPN2-201ENST00000374133 NCAPD3P42695 1498 aa16.35■□□□□ 0.21
GPN2-201ENST00000374133 HMGXB3Q12766 1538 aa16.22■□□□□ 0.19
GPN2-201ENST00000374133 ATAD2BQ9ULI0 1458 aa16.2■□□□□ 0.18
GPN2-201ENST00000374133 THOC2Q8NI27 1593 aaKnown RBP16.19■□□□□ 0.18
GPN2-201ENST00000374133 SMARCA2P51531 1590 aa16.17■□□□□ 0.18
GPN2-201ENST00000374133 NESP48681 1621 aa16.16■□□□□ 0.18
GPN2-201ENST00000374133 LAMC3Q9Y6N6 1575 aa16.09■□□□□ 0.17
GPN2-201ENST00000374133 SMARCA4P51532 1647 aa16.08■□□□□ 0.17
GPN2-201ENST00000374133 TRIM41Q8WV44 630 aa16.07■□□□□ 0.16
GPN2-201ENST00000374133 BAZ1BQ9UIG0 1483 aaKnown RBP16.01■□□□□ 0.15
GPN2-201ENST00000374133 KIF21AQ7Z4S6 1674 aa16.01■□□□□ 0.15
GPN2-201ENST00000374133 PEG3Q9GZU2 1588 aa15.99■□□□□ 0.15
GPN2-201ENST00000374133 PDS5BQ9NTI5 1447 aa15.97■□□□□ 0.15
GPN2-201ENST00000374133 BAZ1AQ9NRL2 1556 aaPredicted RBP15.95■□□□□ 0.14
GPN2-201ENST00000374133 WDR62O43379 1518 aa15.87■□□□□ 0.13
GPN2-201ENST00000374133 MRC2Q9UBG0 1479 aa15.85■□□□□ 0.13
GPN2-201ENST00000374133 CADPSQ9ULU8 1353 aa15.8■□□□□ 0.12
GPN2-201ENST00000374133 OSCARQ8IYS5 282 aa15.74■□□□□ 0.11
GPN2-201ENST00000374133 MROH2BQ7Z745 1585 aa15.73■□□□□ 0.11
GPN2-201ENST00000374133 CEP164Q9UPV0 1460 aa15.69■□□□□ 0.1
GPN2-201ENST00000374133 RIMBP3CA6NJZ7 1639 aa15.63■□□□□ 0.09
GPN2-201ENST00000374133 RIMBP3BA6NNM3 1639 aa15.63■□□□□ 0.09
GPN2-201ENST00000374133 RIMBP3Q9UFD9 1639 aa15.63■□□□□ 0.09
GPN2-201ENST00000374133 FANCD2Q9BXW9 1451 aa15.61■□□□□ 0.09
GPN2-201ENST00000374133 CFTRP13569 1480 aa15.54■□□□□ 0.08
GPN2-201ENST00000374133 WIZO95785 1651 aa15.53■□□□□ 0.08
GPN2-201ENST00000374133 ARHGEF11O15085 1522 aa15.53■□□□□ 0.08
GPN2-201ENST00000374133 URB2Q14146 1524 aaKnown RBP15.51■□□□□ 0.07
GPN2-201ENST00000374133 SENP3Q9H4L4 574 aaPredicted RBP15.49■□□□□ 0.07
GPN2-201ENST00000374133 PRDM2Q13029 1718 aa15.43■□□□□ 0.06
GPN2-201ENST00000374133 IFT140Q96RY7 1462 aa15.4■□□□□ 0.06
GPN2-201ENST00000374133 ZNF608Q9ULD9 1512 aaPredicted RBP15.37■□□□□ 0.05
GPN2-201ENST00000374133 RSF1Q96T23 1441 aaPredicted RBP15.34■□□□□ 0.05
GPN2-201ENST00000374133 TOP2AP11388 1531 aaKnown RBP15.34■□□□□ 0.05
GPN2-201ENST00000374133 CYB5RLQ6IPT4 315 aa15.34■□□□□ 0.05
GPN2-201ENST00000374133 ARAP1Q96P48 1450 aa15.33■□□□□ 0.04
GPN2-201ENST00000374133 EIF4G3O43432 1585 aaKnown RBP15.32■□□□□ 0.04
GPN2-201ENST00000374133 TRHP20396 242 aaPredicted RBP15.32■□□□□ 0.04
GPN2-201ENST00000374133 CHD1O14646 1710 aa15.3■□□□□ 0.04
GPN2-201ENST00000374133 ABCC8Q09428 1581 aa15.27■□□□□ 0.03
GPN2-201ENST00000374133 TOPBP1Q92547 1522 aa15.27■□□□□ 0.03
GPN2-201ENST00000374133 PHF23Q9BUL5 403 aaPredicted RBP15.25■□□□□ 0.03
GPN2-201ENST00000374133 DNMBPQ6XZF7 1577 aa15.2■□□□□ 0.02
GPN2-201ENST00000374133 TARBP1Q13395 1621 aaKnown RBP15.2■□□□□ 0.02
GPN2-201ENST00000374133 AQRO60306 1485 aaKnown RBP eCLIP15.15■□□□□ 0.02
GPN2-201ENST00000374133 CLASP1Q7Z460 1538 aa15.13■□□□□ 0.01
GPN2-201ENST00000374133 CCDC88BA6NC98 1476 aa15.12■□□□□ 0.01
GPN2-201ENST00000374133 WDR97A6NE52 1622 aa15.1■□□□□ 0.01
GPN2-201ENST00000374133 FBLN2P98095 1184 aa15.09■□□□□ 0.01
GPN2-201ENST00000374133 SYNJ1O43426 1573 aa15.08■□□□□ 0
GPN2-201ENST00000374133 POLA1P09884 1462 aaPredicted RBP15.08■□□□□ 0
GPN2-201ENST00000374133 SNAPC4Q5SXM2 1469 aa15.02■□□□□ -0
GPN2-201ENST00000374133 MAGI1Q96QZ7 1491 aaPredicted RBP15.02■□□□□ -0
GPN2-201ENST00000374133 RAD54L2Q9Y4B4 1467 aa14.98□□□□□ -0.01
GPN2-201ENST00000374133 SOGA1O94964 1423 aa14.98□□□□□ -0.01
GPN2-201ENST00000374133 TDRD9Q8NDG6 1382 aaKnown RBP14.97□□□□□ -0.01
GPN2-201ENST00000374133 CHMP7Q8WUX9 453 aaPredicted RBP14.96□□□□□ -0.01
GPN2-201ENST00000374133 SYNJ2O15056 1496 aa14.95□□□□□ -0.02
GPN2-201ENST00000374133 GAPVD1Q14C86 1478 aa14.95□□□□□ -0.02
GPN2-201ENST00000374133 GRIN2BQ13224 1484 aa14.94□□□□□ -0.02
GPN2-201ENST00000374133 FGD5Q6ZNL6 1462 aa14.9□□□□□ -0.02
GPN2-201ENST00000374133 PBRM1Q86U86 1689 aa14.88□□□□□ -0.03
GPN2-201ENST00000374133 SUPT5HO00267 1087 aaKnown RBP14.88□□□□□ -0.03
GPN2-201ENST00000374133 CUX1P39880 1505 aa14.82□□□□□ -0.04
GPN2-201ENST00000374133 KIF13AQ9H1H9 1805 aa14.81□□□□□ -0.04
GPN2-201ENST00000374133 ABCA5Q8WWZ7 1642 aa14.78□□□□□ -0.04
GPN2-201ENST00000374133 ERCC6L2Q5T890 1561 aa14.78□□□□□ -0.04
GPN2-201ENST00000374133 CEP170Q5SW79 1584 aa14.77□□□□□ -0.05
GPN2-201ENST00000374133 SHROOM2Q13796 1616 aa14.76□□□□□ -0.05
GPN2-201ENST00000374133 ABCA10Q8WWZ4 1543 aa14.75□□□□□ -0.05
GPN2-201ENST00000374133 GRIN2AQ12879 1464 aa14.75□□□□□ -0.05
GPN2-201ENST00000374133 NUP160Q12769 1436 aa14.74□□□□□ -0.05
GPN2-201ENST00000374133 ADAMTS12P58397 1594 aa14.69□□□□□ -0.06
GPN2-201ENST00000374133 ABCC10Q5T3U5 1492 aa14.65□□□□□ -0.06
GPN2-201ENST00000374133 ILDR1Q86SU0 546 aaPredicted RBP14.64□□□□□ -0.07
GPN2-201ENST00000374133 MAPKBP1O60336 1514 aa14.64□□□□□ -0.07
GPN2-201ENST00000374133 DIP2BQ9P265 1576 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms