RNA–Protein interactions for RNA: ENST00000373895.7

TFAM-201, Transcript of transcription factor A, mitochondrial, humanhuman

TSL 2 BASIC

Gene TFAM, Length 973 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-201ENST00000373895 AEBP2Q6ZN18 517 aaPredicted RBP31.26■■■□□ 2.59
TFAM-201ENST00000373895 NISCHQ9Y2I1 1504 aa30.62■■■□□ 2.49
TFAM-201ENST00000373895 CHIC1Q5VXU3 224 aa29.71■■■□□ 2.35
TFAM-201ENST00000373895 CCDC180Q9P1Z9 1646 aa27.41■■□□□ 1.98
TFAM-201ENST00000373895 ABCC9O60706 1549 aa27.39■■□□□ 1.98
TFAM-201ENST00000373895 SENP3Q9H4L4 574 aaPredicted RBP26.85■■□□□ 1.89
TFAM-201ENST00000373895 PHF23Q9BUL5 403 aaPredicted RBP26.41■■□□□ 1.82
TFAM-201ENST00000373895 RB1CC1Q8TDY2 1594 aa26.06■■□□□ 1.76
TFAM-201ENST00000373895 NACADO15069 1562 aa25.9■■□□□ 1.74
TFAM-201ENST00000373895 DCAF8L2P0C7V8 631 aa25.89■■□□□ 1.74
TFAM-201ENST00000373895 DNAJC5BQ9UF47 199 aa25.64■■□□□ 1.7
TFAM-201ENST00000373895 PABPN1Q86U42 306 aaKnown RBP eCLIP25.54■■□□□ 1.68
TFAM-201ENST00000373895 UNC13AQ9UPW8 1703 aa25.54■■□□□ 1.68
TFAM-201ENST00000373895 MYO15BQ96JP2 1530 aa25.53■■□□□ 1.68
TFAM-201ENST00000373895 ZCCHC6Q5VYS8 1495 aaKnown RBP25.38■■□□□ 1.65
TFAM-201ENST00000373895 BICRAQ9NZM4 1560 aa25.33■■□□□ 1.65
TFAM-201ENST00000373895 DCAF1Q9Y4B6 1507 aa25.25■■□□□ 1.63
TFAM-201ENST00000373895 SCRIBQ14160 1630 aa25.04■■□□□ 1.6
TFAM-201ENST00000373895 FOXD1Q16676 465 aa24.91■■□□□ 1.58
TFAM-201ENST00000373895 SHROOM4Q9ULL8 1493 aa24.89■■□□□ 1.58
TFAM-201ENST00000373895 CC2D2AQ9P2K1 1620 aa24.73■■□□□ 1.55
TFAM-201ENST00000373895 EIF4G1Q04637 1599 aaKnown RBP24.68■■□□□ 1.54
TFAM-201ENST00000373895 CECR2Q9BXF3 1484 aa24.64■■□□□ 1.53
TFAM-201ENST00000373895 NCAPD3P42695 1498 aa23.91■■□□□ 1.42
TFAM-201ENST00000373895 SMARCA4P51532 1647 aa23.88■■□□□ 1.41
TFAM-201ENST00000373895 ATAD2BQ9ULI0 1458 aa23.87■■□□□ 1.41
TFAM-201ENST00000373895 PLPPR3Q6T4P5 718 aa23.79■■□□□ 1.4
TFAM-201ENST00000373895 SMARCA2P51531 1590 aa23.78■■□□□ 1.4
TFAM-201ENST00000373895 BAZ1AQ9NRL2 1556 aaPredicted RBP23.74■■□□□ 1.39
TFAM-201ENST00000373895 HMGXB3Q12766 1538 aa23.73■■□□□ 1.39
TFAM-201ENST00000373895 BAZ1BQ9UIG0 1483 aaKnown RBP23.64■■□□□ 1.38
TFAM-201ENST00000373895 MROH2BQ7Z745 1585 aa23.62■■□□□ 1.37
TFAM-201ENST00000373895 ERCC6Q03468 1493 aa23.62■■□□□ 1.37
TFAM-201ENST00000373895 PEG3Q9GZU2 1588 aa23.61■■□□□ 1.37
TFAM-201ENST00000373895 NESP48681 1621 aa23.56■■□□□ 1.36
TFAM-201ENST00000373895 CUX2O14529 1486 aa23.5■■□□□ 1.35
TFAM-201ENST00000373895 MSH5O43196 834 aa23.48■■□□□ 1.35
TFAM-201ENST00000373895 DNAJC5Q9H3Z4 198 aa23.43■■□□□ 1.34
TFAM-201ENST00000373895 PIAS4Q8N2W9 510 aaPredicted RBP23.39■■□□□ 1.33
TFAM-201ENST00000373895 WIZO95785 1651 aa23.37■■□□□ 1.33
TFAM-201ENST00000373895 LAMC3Q9Y6N6 1575 aa23.36■■□□□ 1.33
TFAM-201ENST00000373895 THOC2Q8NI27 1593 aaKnown RBP23.27■■□□□ 1.32
TFAM-201ENST00000373895 KIF21AQ7Z4S6 1674 aa23.26■■□□□ 1.31
TFAM-201ENST00000373895 PDS5BQ9NTI5 1447 aa23.22■■□□□ 1.31
TFAM-201ENST00000373895 CADPSQ9ULU8 1353 aa23.2■■□□□ 1.3
TFAM-201ENST00000373895 ADRA2BP18089 450 aa23.18■■□□□ 1.3
TFAM-201ENST00000373895 PPP6R1Q9UPN7 881 aa23.18■■□□□ 1.3
TFAM-201ENST00000373895 RSF1Q96T23 1441 aaPredicted RBP23.16■■□□□ 1.3
TFAM-201ENST00000373895 TOP2AP11388 1531 aaKnown RBP23.03■■□□□ 1.28
TFAM-201ENST00000373895 MRC2Q9UBG0 1479 aa23.02■■□□□ 1.28
TFAM-201ENST00000373895 WDR62O43379 1518 aa22.95■■□□□ 1.26
TFAM-201ENST00000373895 CFTRP13569 1480 aa22.95■■□□□ 1.26
TFAM-201ENST00000373895 CEP164Q9UPV0 1460 aa22.95■■□□□ 1.26
TFAM-201ENST00000373895 FANCD2Q9BXW9 1451 aa22.94■■□□□ 1.26
TFAM-201ENST00000373895 POTEDQ86YR6 584 aa22.92■■□□□ 1.26
TFAM-201ENST00000373895 CCDC88BA6NC98 1476 aa22.79■■□□□ 1.24
TFAM-201ENST00000373895 URB2Q14146 1524 aaKnown RBP22.77■■□□□ 1.24
TFAM-201ENST00000373895 PRDM2Q13029 1718 aa22.75■■□□□ 1.23
TFAM-201ENST00000373895 TOPBP1Q92547 1522 aa22.52■■□□□ 1.2
TFAM-201ENST00000373895 TRIM41Q8WV44 630 aa22.5■■□□□ 1.19
TFAM-201ENST00000373895 OSCARQ8IYS5 282 aa22.49■■□□□ 1.19
TFAM-201ENST00000373895 IFT140Q96RY7 1462 aa22.48■■□□□ 1.19
TFAM-201ENST00000373895 ZNF608Q9ULD9 1512 aaPredicted RBP22.47■■□□□ 1.19
TFAM-201ENST00000373895 ABCC8Q09428 1581 aa22.45■■□□□ 1.18
TFAM-201ENST00000373895 DNMBPQ6XZF7 1577 aa22.44■■□□□ 1.18
TFAM-201ENST00000373895 EIF4G3O43432 1585 aaKnown RBP22.34■■□□□ 1.17
TFAM-201ENST00000373895 TARBP1Q13395 1621 aaKnown RBP22.31■■□□□ 1.16
TFAM-201ENST00000373895 AQRO60306 1485 aaKnown RBP eCLIP22.29■■□□□ 1.166e-10■■■■■ 33.6
TFAM-201ENST00000373895 POLA1P09884 1462 aaPredicted RBP22.29■■□□□ 1.16
TFAM-201ENST00000373895 SUPT5HO00267 1087 aaKnown RBP22.27■■□□□ 1.16
TFAM-201ENST00000373895 RAD54L2Q9Y4B4 1467 aa22.25■■□□□ 1.15
TFAM-201ENST00000373895 SOGA1O94964 1423 aa22.21■■□□□ 1.15
TFAM-201ENST00000373895 RIMBP3CA6NJZ7 1639 aa22.2■■□□□ 1.14
TFAM-201ENST00000373895 RIMBP3BA6NNM3 1639 aa22.2■■□□□ 1.14
TFAM-201ENST00000373895 RIMBP3Q9UFD9 1639 aa22.2■■□□□ 1.14
TFAM-201ENST00000373895 CHD1O14646 1710 aa22.19■■□□□ 1.14
TFAM-201ENST00000373895 CUX1P39880 1505 aa22.18■■□□□ 1.14
TFAM-201ENST00000373895 FGD5Q6ZNL6 1462 aa22.18■■□□□ 1.14
TFAM-201ENST00000373895 TDRD9Q8NDG6 1382 aaKnown RBP22.17■■□□□ 1.14
TFAM-201ENST00000373895 FBLN2P98095 1184 aa22.15■■□□□ 1.14
TFAM-201ENST00000373895 ARHGEF11O15085 1522 aa22.11■■□□□ 1.13
TFAM-201ENST00000373895 SNAPC4Q5SXM2 1469 aa22.05■■□□□ 1.12
TFAM-201ENST00000373895 WDR97A6NE52 1622 aa22.04■■□□□ 1.12
TFAM-201ENST00000373895 CYB5RLQ6IPT4 315 aa21.99■■□□□ 1.11
TFAM-201ENST00000373895 GRIN2BQ13224 1484 aa21.98■■□□□ 1.11
TFAM-201ENST00000373895 CHMP7Q8WUX9 453 aaPredicted RBP21.98■■□□□ 1.11
TFAM-201ENST00000373895 MAGI1Q96QZ7 1491 aaPredicted RBP21.96■■□□□ 1.11
TFAM-201ENST00000373895 GAPVD1Q14C86 1478 aa21.94■■□□□ 1.1
TFAM-201ENST00000373895 PBRM1Q86U86 1689 aa21.94■■□□□ 1.1
TFAM-201ENST00000373895 ARAP1Q96P48 1450 aa21.91■■□□□ 1.1
TFAM-201ENST00000373895 ABCA10Q8WWZ4 1543 aa21.9■■□□□ 1.1
TFAM-201ENST00000373895 SYNJ2O15056 1496 aa21.9■■□□□ 1.1
TFAM-201ENST00000373895 SYNJ1O43426 1573 aa21.89■■□□□ 1.09
TFAM-201ENST00000373895 CLASP1Q7Z460 1538 aa21.89■■□□□ 1.09
TFAM-201ENST00000373895 ABCA5Q8WWZ7 1642 aa21.88■■□□□ 1.09
TFAM-201ENST00000373895 WRNQ14191 1432 aaPredicted RBP eCLIP21.84■■□□□ 1.09
TFAM-201ENST00000373895 TOP2BQ02880 1626 aa21.84■■□□□ 1.09
TFAM-201ENST00000373895 BIVM-ERCC5R4GMW8 1640 aa21.84■■□□□ 1.09
TFAM-201ENST00000373895 TRHP20396 242 aaPredicted RBP21.73■■□□□ 1.07
TFAM-201ENST00000373895 ADAMTS12P58397 1594 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms