RNA–Protein interactions for RNA: ENST00000372521.8

SVBP-201, Transcript of small vasohibin binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVBP, Length 658 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVBP-201ENST00000372521 NISCHQ9Y2I1 1504 aa22.28■■□□□ 1.16
SVBP-201ENST00000372521 AEBP2Q6ZN18 517 aaPredicted RBP21.42■■□□□ 1.02
SVBP-201ENST00000372521 ABCC9O60706 1549 aa20.48■□□□□ 0.87
SVBP-201ENST00000372521 CHIC1Q5VXU3 224 aa20.41■□□□□ 0.86
SVBP-201ENST00000372521 CCDC180Q9P1Z9 1646 aa20.04■□□□□ 0.8
SVBP-201ENST00000372521 DNAJC5BQ9UF47 199 aa19.65■□□□□ 0.74
SVBP-201ENST00000372521 RB1CC1Q8TDY2 1594 aa19.3■□□□□ 0.68
SVBP-201ENST00000372521 NACADO15069 1562 aa19.11■□□□□ 0.65
SVBP-201ENST00000372521 PABPN1Q86U42 306 aaKnown RBP eCLIP19.07■□□□□ 0.64
SVBP-201ENST00000372521 DCAF8L2P0C7V8 631 aa18.98■□□□□ 0.63
SVBP-201ENST00000372521 MYO15BQ96JP2 1530 aa18.79■□□□□ 0.6
SVBP-201ENST00000372521 BICRAQ9NZM4 1560 aa18.78■□□□□ 0.6
SVBP-201ENST00000372521 UNC13AQ9UPW8 1703 aa18.72■□□□□ 0.59
SVBP-201ENST00000372521 SHROOM4Q9ULL8 1493 aa18.52■□□□□ 0.55
SVBP-201ENST00000372521 CECR2Q9BXF3 1484 aa18.51■□□□□ 0.55
SVBP-201ENST00000372521 CC2D2AQ9P2K1 1620 aa18.44■□□□□ 0.54
SVBP-201ENST00000372521 DCAF1Q9Y4B6 1507 aa18.39■□□□□ 0.54
SVBP-201ENST00000372521 ZCCHC6Q5VYS8 1495 aaKnown RBP18.37■□□□□ 0.53
SVBP-201ENST00000372521 EIF4G1Q04637 1599 aaKnown RBP18.33■□□□□ 0.52
SVBP-201ENST00000372521 DNAJC5Q9H3Z4 198 aa18.32■□□□□ 0.52
SVBP-201ENST00000372521 SCRIBQ14160 1630 aa18.23■□□□□ 0.51
SVBP-201ENST00000372521 SENP3Q9H4L4 574 aaPredicted RBP18.21■□□□□ 0.51
SVBP-201ENST00000372521 PHF23Q9BUL5 403 aaPredicted RBP18.02■□□□□ 0.48
SVBP-201ENST00000372521 CUX2O14529 1486 aa17.82■□□□□ 0.44
SVBP-201ENST00000372521 NCAPD3P42695 1498 aa17.73■□□□□ 0.43
SVBP-201ENST00000372521 ERCC6Q03468 1493 aa17.69■□□□□ 0.42
SVBP-201ENST00000372521 ATAD2BQ9ULI0 1458 aa17.58■□□□□ 0.41
SVBP-201ENST00000372521 NESP48681 1621 aa17.49■□□□□ 0.39
SVBP-201ENST00000372521 HMGXB3Q12766 1538 aa17.48■□□□□ 0.39
SVBP-201ENST00000372521 SMARCA2P51531 1590 aa17.47■□□□□ 0.39
SVBP-201ENST00000372521 SMARCA4P51532 1647 aa17.39■□□□□ 0.37
SVBP-201ENST00000372521 BAZ1BQ9UIG0 1483 aaKnown RBP17.35■□□□□ 0.37
SVBP-201ENST00000372521 THOC2Q8NI27 1593 aaKnown RBP17.32■□□□□ 0.36
SVBP-201ENST00000372521 BAZ1AQ9NRL2 1556 aaPredicted RBP17.28■□□□□ 0.36
SVBP-201ENST00000372521 LAMC3Q9Y6N6 1575 aa17.28■□□□□ 0.36
SVBP-201ENST00000372521 PEG3Q9GZU2 1588 aa17.28■□□□□ 0.36
SVBP-201ENST00000372521 TRIM41Q8WV44 630 aa17.27■□□□□ 0.36
SVBP-201ENST00000372521 PDS5BQ9NTI5 1447 aa17.27■□□□□ 0.35
SVBP-201ENST00000372521 CADPSQ9ULU8 1353 aa17.16■□□□□ 0.34
SVBP-201ENST00000372521 MROH2BQ7Z745 1585 aa17.15■□□□□ 0.34
SVBP-201ENST00000372521 KIF21AQ7Z4S6 1674 aa17.13■□□□□ 0.33
SVBP-201ENST00000372521 MRC2Q9UBG0 1479 aa17.1■□□□□ 0.33
SVBP-201ENST00000372521 WDR62O43379 1518 aa17.05■□□□□ 0.32
SVBP-201ENST00000372521 OSCARQ8IYS5 282 aa17.02■□□□□ 0.32
SVBP-201ENST00000372521 FOXD1Q16676 465 aa17■□□□□ 0.31
SVBP-201ENST00000372521 CEP164Q9UPV0 1460 aa16.94■□□□□ 0.3
SVBP-201ENST00000372521 FANCD2Q9BXW9 1451 aa16.92■□□□□ 0.3
SVBP-201ENST00000372521 CFTRP13569 1480 aa16.87■□□□□ 0.29
SVBP-201ENST00000372521 WIZO95785 1651 aa16.85■□□□□ 0.29
SVBP-201ENST00000372521 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
SVBP-201ENST00000372521 RSF1Q96T23 1441 aaPredicted RBP16.71■□□□□ 0.27
SVBP-201ENST00000372521 RIMBP3CA6NJZ7 1639 aa16.69■□□□□ 0.26
SVBP-201ENST00000372521 RIMBP3BA6NNM3 1639 aa16.69■□□□□ 0.26
SVBP-201ENST00000372521 RIMBP3Q9UFD9 1639 aa16.69■□□□□ 0.26
SVBP-201ENST00000372521 TOP2AP11388 1531 aaKnown RBP16.66■□□□□ 0.26
SVBP-201ENST00000372521 ZNF608Q9ULD9 1512 aaPredicted RBP16.65■□□□□ 0.26
SVBP-201ENST00000372521 IFT140Q96RY7 1462 aa16.65■□□□□ 0.26
SVBP-201ENST00000372521 ARHGEF11O15085 1522 aa16.65■□□□□ 0.26
SVBP-201ENST00000372521 CYB5RLQ6IPT4 315 aa16.62■□□□□ 0.25
SVBP-201ENST00000372521 TOPBP1Q92547 1522 aa16.55■□□□□ 0.24
SVBP-201ENST00000372521 CCDC88BA6NC98 1476 aa16.53■□□□□ 0.24
SVBP-201ENST00000372521 ABCC8Q09428 1581 aa16.51■□□□□ 0.23
SVBP-201ENST00000372521 TRHP20396 242 aaPredicted RBP16.51■□□□□ 0.23
SVBP-201ENST00000372521 AQRO60306 1485 aaKnown RBP eCLIP16.48■□□□□ 0.23
SVBP-201ENST00000372521 ARAP1Q96P48 1450 aa16.48■□□□□ 0.23
SVBP-201ENST00000372521 EIF4G3O43432 1585 aaKnown RBP16.46■□□□□ 0.23
SVBP-201ENST00000372521 PRDM2Q13029 1718 aa16.45■□□□□ 0.22
SVBP-201ENST00000372521 FBLN2P98095 1184 aa16.44■□□□□ 0.22
SVBP-201ENST00000372521 DNMBPQ6XZF7 1577 aa16.42■□□□□ 0.22
SVBP-201ENST00000372521 TARBP1Q13395 1621 aaKnown RBP16.4■□□□□ 0.22
SVBP-201ENST00000372521 POLA1P09884 1462 aaPredicted RBP16.36■□□□□ 0.21
SVBP-201ENST00000372521 CHD1O14646 1710 aa16.34■□□□□ 0.21
SVBP-201ENST00000372521 PLPPR3Q6T4P5 718 aa16.33■□□□□ 0.2
SVBP-201ENST00000372521 TDRD9Q8NDG6 1382 aaKnown RBP16.33■□□□□ 0.2
SVBP-201ENST00000372521 SOGA1O94964 1423 aa16.32■□□□□ 0.2
SVBP-201ENST00000372521 RAD54L2Q9Y4B4 1467 aa16.31■□□□□ 0.2
SVBP-201ENST00000372521 CHMP7Q8WUX9 453 aaPredicted RBP16.29■□□□□ 0.2
SVBP-201ENST00000372521 CLASP1Q7Z460 1538 aa16.26■□□□□ 0.19
SVBP-201ENST00000372521 SNAPC4Q5SXM2 1469 aa16.25■□□□□ 0.19
SVBP-201ENST00000372521 MAGI1Q96QZ7 1491 aaPredicted RBP16.22■□□□□ 0.19
SVBP-201ENST00000372521 WDR97A6NE52 1622 aa16.19■□□□□ 0.18
SVBP-201ENST00000372521 SYNJ1O43426 1573 aa16.19■□□□□ 0.18
SVBP-201ENST00000372521 GRIN2BQ13224 1484 aa16.19■□□□□ 0.18
SVBP-201ENST00000372521 FGD5Q6ZNL6 1462 aa16.19■□□□□ 0.18
SVBP-201ENST00000372521 SYNJ2O15056 1496 aa16.17■□□□□ 0.18
SVBP-201ENST00000372521 GAPVD1Q14C86 1478 aa16.15■□□□□ 0.18
SVBP-201ENST00000372521 CUX1P39880 1505 aa16.13■□□□□ 0.17
SVBP-201ENST00000372521 ABCA10Q8WWZ4 1543 aa16.02■□□□□ 0.15
SVBP-201ENST00000372521 PPP6R1Q9UPN7 881 aa15.99■□□□□ 0.15
SVBP-201ENST00000372521 ERCC6L2Q5T890 1561 aa15.98■□□□□ 0.15
SVBP-201ENST00000372521 GRIN2AQ12879 1464 aa15.97■□□□□ 0.15
SVBP-201ENST00000372521 NUP160Q12769 1436 aa15.96■□□□□ 0.15
SVBP-201ENST00000372521 ABCA5Q8WWZ7 1642 aa15.95■□□□□ 0.14
SVBP-201ENST00000372521 PBRM1Q86U86 1689 aa15.95■□□□□ 0.14
SVBP-201ENST00000372521 ADRA2BP18089 450 aa15.93■□□□□ 0.14
SVBP-201ENST00000372521 CEP170Q5SW79 1584 aa15.92■□□□□ 0.14
SVBP-201ENST00000372521 WRNQ14191 1432 aaPredicted RBP eCLIP15.9■□□□□ 0.14
SVBP-201ENST00000372521 FHAD1B1AJZ9 1412 aa15.88■□□□□ 0.13
SVBP-201ENST00000372521 PIAS4Q8N2W9 510 aaPredicted RBP15.88■□□□□ 0.13
SVBP-201ENST00000372521 SHROOM2Q13796 1616 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms