RNA–Protein interactions for RNA: ENST00000372275.5

TMEM254-203, Transcript of transmembrane protein 254, humanhuman

TSL 2 BASIC

Gene TMEM254, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-203ENST00000372275 NISCHQ9Y2I1 1504 aa23.73■■□□□ 1.39
TMEM254-203ENST00000372275 AEBP2Q6ZN18 517 aaPredicted RBP22.87■■□□□ 1.25
TMEM254-203ENST00000372275 CHIC1Q5VXU3 224 aa22.15■■□□□ 1.14
TMEM254-203ENST00000372275 ABCC9O60706 1549 aa21.93■■□□□ 1.1
TMEM254-203ENST00000372275 CCDC180Q9P1Z9 1646 aa21.45■■□□□ 1.02
TMEM254-203ENST00000372275 DNAJC5BQ9UF47 199 aa20.85■□□□□ 0.93
TMEM254-203ENST00000372275 RB1CC1Q8TDY2 1594 aa20.55■□□□□ 0.88
TMEM254-203ENST00000372275 UNC13AQ9UPW8 1703 aa20.4■□□□□ 0.86
TMEM254-203ENST00000372275 PABPN1Q86U42 306 aaKnown RBP eCLIP20.36■□□□□ 0.85
TMEM254-203ENST00000372275 DCAF8L2P0C7V8 631 aa20.32■□□□□ 0.84
TMEM254-203ENST00000372275 NACADO15069 1562 aa20.27■□□□□ 0.84
TMEM254-203ENST00000372275 BICRAQ9NZM4 1560 aa20.09■□□□□ 0.81
TMEM254-203ENST00000372275 CC2D2AQ9P2K1 1620 aa19.76■□□□□ 0.75
TMEM254-203ENST00000372275 SCRIBQ14160 1630 aa19.73■□□□□ 0.75
TMEM254-203ENST00000372275 MYO15BQ96JP2 1530 aa19.72■□□□□ 0.75
TMEM254-203ENST00000372275 CECR2Q9BXF3 1484 aa19.68■□□□□ 0.74
TMEM254-203ENST00000372275 ZCCHC6Q5VYS8 1495 aaKnown RBP19.6■□□□□ 0.73
TMEM254-203ENST00000372275 EIF4G1Q04637 1599 aaKnown RBP19.58■□□□□ 0.73
TMEM254-203ENST00000372275 SENP3Q9H4L4 574 aaPredicted RBP19.54■□□□□ 0.72
TMEM254-203ENST00000372275 SHROOM4Q9ULL8 1493 aa19.44■□□□□ 0.7
TMEM254-203ENST00000372275 DCAF1Q9Y4B6 1507 aa19.41■□□□□ 0.7
TMEM254-203ENST00000372275 PHF23Q9BUL5 403 aaPredicted RBP19.4■□□□□ 0.7
TMEM254-203ENST00000372275 DNAJC5Q9H3Z4 198 aa19.2■□□□□ 0.66
TMEM254-203ENST00000372275 ERCC6Q03468 1493 aa18.87■□□□□ 0.61
TMEM254-203ENST00000372275 CUX2O14529 1486 aa18.81■□□□□ 0.6
TMEM254-203ENST00000372275 NESP48681 1621 aa18.78■□□□□ 0.6
TMEM254-203ENST00000372275 NCAPD3P42695 1498 aa18.68■□□□□ 0.58
TMEM254-203ENST00000372275 ATAD2BQ9ULI0 1458 aa18.68■□□□□ 0.58
TMEM254-203ENST00000372275 SMARCA4P51532 1647 aa18.67■□□□□ 0.58
TMEM254-203ENST00000372275 THOC2Q8NI27 1593 aaKnown RBP18.6■□□□□ 0.57
TMEM254-203ENST00000372275 KIF21AQ7Z4S6 1674 aa18.6■□□□□ 0.57
TMEM254-203ENST00000372275 SMARCA2P51531 1590 aa18.58■□□□□ 0.56
TMEM254-203ENST00000372275 HMGXB3Q12766 1538 aa18.58■□□□□ 0.56
TMEM254-203ENST00000372275 BAZ1BQ9UIG0 1483 aaKnown RBP18.51■□□□□ 0.55
TMEM254-203ENST00000372275 TRIM41Q8WV44 630 aa18.46■□□□□ 0.55
TMEM254-203ENST00000372275 BAZ1AQ9NRL2 1556 aaPredicted RBP18.41■□□□□ 0.54
TMEM254-203ENST00000372275 LAMC3Q9Y6N6 1575 aa18.39■□□□□ 0.53
TMEM254-203ENST00000372275 MROH2BQ7Z745 1585 aa18.38■□□□□ 0.53
TMEM254-203ENST00000372275 PEG3Q9GZU2 1588 aa18.34■□□□□ 0.53
TMEM254-203ENST00000372275 WIZO95785 1651 aa18.25■□□□□ 0.51
TMEM254-203ENST00000372275 PDS5BQ9NTI5 1447 aa18.23■□□□□ 0.51
TMEM254-203ENST00000372275 MRC2Q9UBG0 1479 aa18.2■□□□□ 0.5
TMEM254-203ENST00000372275 WDR62O43379 1518 aa18.17■□□□□ 0.5
TMEM254-203ENST00000372275 CADPSQ9ULU8 1353 aa18.13■□□□□ 0.49
TMEM254-203ENST00000372275 FOXD1Q16676 465 aa18.09■□□□□ 0.49
TMEM254-203ENST00000372275 CEP164Q9UPV0 1460 aa18.07■□□□□ 0.48
TMEM254-203ENST00000372275 FANCD2Q9BXW9 1451 aa18.02■□□□□ 0.48
TMEM254-203ENST00000372275 URB2Q14146 1524 aaKnown RBP17.96■□□□□ 0.47
TMEM254-203ENST00000372275 RIMBP3CA6NJZ7 1639 aa17.93■□□□□ 0.46
TMEM254-203ENST00000372275 RIMBP3BA6NNM3 1639 aa17.93■□□□□ 0.46
TMEM254-203ENST00000372275 RIMBP3Q9UFD9 1639 aa17.93■□□□□ 0.46
TMEM254-203ENST00000372275 PLPPR3Q6T4P5 718 aa17.91■□□□□ 0.46
TMEM254-203ENST00000372275 OSCARQ8IYS5 282 aa17.89■□□□□ 0.45
TMEM254-203ENST00000372275 PRDM2Q13029 1718 aa17.89■□□□□ 0.45
TMEM254-203ENST00000372275 CFTRP13569 1480 aa17.87■□□□□ 0.45
TMEM254-203ENST00000372275 TOP2AP11388 1531 aaKnown RBP17.82■□□□□ 0.44
TMEM254-203ENST00000372275 ZNF608Q9ULD9 1512 aaPredicted RBP17.82■□□□□ 0.44
TMEM254-203ENST00000372275 RSF1Q96T23 1441 aaPredicted RBP17.78■□□□□ 0.44
TMEM254-203ENST00000372275 CHD1O14646 1710 aa17.76■□□□□ 0.43
TMEM254-203ENST00000372275 ARHGEF11O15085 1522 aa17.76■□□□□ 0.43
TMEM254-203ENST00000372275 EIF4G3O43432 1585 aaKnown RBP17.73■□□□□ 0.43
TMEM254-203ENST00000372275 TOPBP1Q92547 1522 aa17.66■□□□□ 0.42
TMEM254-203ENST00000372275 CCDC88BA6NC98 1476 aa17.64■□□□□ 0.41
TMEM254-203ENST00000372275 IFT140Q96RY7 1462 aa17.64■□□□□ 0.41
TMEM254-203ENST00000372275 CYB5RLQ6IPT4 315 aa17.63■□□□□ 0.41
TMEM254-203ENST00000372275 AQRO60306 1485 aaKnown RBP eCLIP17.58■□□□□ 0.41
TMEM254-203ENST00000372275 ARAP1Q96P48 1450 aa17.58■□□□□ 0.41
TMEM254-203ENST00000372275 TRHP20396 242 aaPredicted RBP17.58■□□□□ 0.4
TMEM254-203ENST00000372275 TARBP1Q13395 1621 aaKnown RBP17.57■□□□□ 0.4
TMEM254-203ENST00000372275 DNMBPQ6XZF7 1577 aa17.56■□□□□ 0.4
TMEM254-203ENST00000372275 FBLN2P98095 1184 aa17.55■□□□□ 0.4
TMEM254-203ENST00000372275 RAD54L2Q9Y4B4 1467 aa17.49■□□□□ 0.39
TMEM254-203ENST00000372275 POLA1P09884 1462 aaPredicted RBP17.46■□□□□ 0.39
TMEM254-203ENST00000372275 TDRD9Q8NDG6 1382 aaKnown RBP17.4■□□□□ 0.38
TMEM254-203ENST00000372275 SNAPC4Q5SXM2 1469 aa17.4■□□□□ 0.38
TMEM254-203ENST00000372275 ABCC8Q09428 1581 aa17.4■□□□□ 0.38
TMEM254-203ENST00000372275 CLASP1Q7Z460 1538 aa17.37■□□□□ 0.37
TMEM254-203ENST00000372275 FGD5Q6ZNL6 1462 aa17.34■□□□□ 0.37
TMEM254-203ENST00000372275 PBRM1Q86U86 1689 aa17.33■□□□□ 0.37
TMEM254-203ENST00000372275 SOGA1O94964 1423 aa17.32■□□□□ 0.36
TMEM254-203ENST00000372275 WDR97A6NE52 1622 aa17.3■□□□□ 0.36
TMEM254-203ENST00000372275 SYNJ1O43426 1573 aa17.29■□□□□ 0.36
TMEM254-203ENST00000372275 CUX1P39880 1505 aa17.29■□□□□ 0.36
TMEM254-203ENST00000372275 CHMP7Q8WUX9 453 aaPredicted RBP17.25■□□□□ 0.35
TMEM254-203ENST00000372275 ERCC6L2Q5T890 1561 aa17.23■□□□□ 0.35
TMEM254-203ENST00000372275 MAGI1Q96QZ7 1491 aaPredicted RBP17.19■□□□□ 0.34
TMEM254-203ENST00000372275 PPP6R1Q9UPN7 881 aa17.19■□□□□ 0.34
TMEM254-203ENST00000372275 GRIN2BQ13224 1484 aa17.18■□□□□ 0.34
TMEM254-203ENST00000372275 SYNJ2O15056 1496 aa17.18■□□□□ 0.34
TMEM254-203ENST00000372275 GAPVD1Q14C86 1478 aa17.18■□□□□ 0.34
TMEM254-203ENST00000372275 ADRA2BP18089 450 aa17.17■□□□□ 0.34
TMEM254-203ENST00000372275 ABCA5Q8WWZ7 1642 aa17.13■□□□□ 0.33
TMEM254-203ENST00000372275 KIF13AQ9H1H9 1805 aa17.09■□□□□ 0.33
TMEM254-203ENST00000372275 CEP170Q5SW79 1584 aa17.08■□□□□ 0.32
TMEM254-203ENST00000372275 ADAMTS12P58397 1594 aa17.04■□□□□ 0.32
TMEM254-203ENST00000372275 PIAS4Q8N2W9 510 aaPredicted RBP17.04■□□□□ 0.32
TMEM254-203ENST00000372275 ABCA10Q8WWZ4 1543 aa17.01■□□□□ 0.31
TMEM254-203ENST00000372275 GRIN2AQ12879 1464 aa17.01■□□□□ 0.31
TMEM254-203ENST00000372275 SHROOM2Q13796 1616 aa16.96■□□□□ 0.31
TMEM254-203ENST00000372275 NUP160Q12769 1436 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms