RNA–Protein interactions for RNA: ENST00000371120.7

ATG4C-203, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-203ENST00000371120 NISCHQ9Y2I1 1504 aa28.32■■■□□ 2.12
ATG4C-203ENST00000371120 CCDC180Q9P1Z9 1646 aa25.32■■□□□ 1.64
ATG4C-203ENST00000371120 DCAF1Q9Y4B6 1507 aa23.89■■□□□ 1.41
ATG4C-203ENST00000371120 ZCCHC6Q5VYS8 1495 aaKnown RBP23.86■■□□□ 1.41
ATG4C-203ENST00000371120 MYO15BQ96JP2 1530 aa23.8■■□□□ 1.4
ATG4C-203ENST00000371120 NACADO15069 1562 aa23.41■■□□□ 1.34
ATG4C-203ENST00000371120 RB1CC1Q8TDY2 1594 aa23.17■■□□□ 1.3
ATG4C-203ENST00000371120 ABCC9O60706 1549 aa23.17■■□□□ 1.3
ATG4C-203ENST00000371120 UNC13AQ9UPW8 1703 aa22.73■■□□□ 1.23
ATG4C-203ENST00000371120 SHROOM4Q9ULL8 1493 aa22.72■■□□□ 1.23
ATG4C-203ENST00000371120 SCRIBQ14160 1630 aa22.52■■□□□ 1.2
ATG4C-203ENST00000371120 BICRAQ9NZM4 1560 aa22.4■■□□□ 1.18
ATG4C-203ENST00000371120 DCAF8L2P0C7V8 631 aa22.23■■□□□ 1.15
ATG4C-203ENST00000371120 BAZ1AQ9NRL2 1556 aaPredicted RBP21.97■■□□□ 1.11
ATG4C-203ENST00000371120 PEG3Q9GZU2 1588 aa21.94■■□□□ 1.1
ATG4C-203ENST00000371120 SMARCA4P51532 1647 aa21.89■■□□□ 1.1
ATG4C-203ENST00000371120 EIF4G1Q04637 1599 aaKnown RBP21.67■■□□□ 1.06
ATG4C-203ENST00000371120 MROH2BQ7Z745 1585 aa21.67■■□□□ 1.06
ATG4C-203ENST00000371120 RSF1Q96T23 1441 aaPredicted RBP21.67■■□□□ 1.06
ATG4C-203ENST00000371120 SMARCA2P51531 1590 aa21.66■■□□□ 1.06
ATG4C-203ENST00000371120 CECR2Q9BXF3 1484 aa21.66■■□□□ 1.06
ATG4C-203ENST00000371120 HMGXB3Q12766 1538 aa21.6■■□□□ 1.05
ATG4C-203ENST00000371120 TOP2AP11388 1531 aaKnown RBP21.55■■□□□ 1.04
ATG4C-203ENST00000371120 WIZO95785 1651 aa21.49■■□□□ 1.03
ATG4C-203ENST00000371120 NCAPD3P42695 1498 aa21.45■■□□□ 1.02
ATG4C-203ENST00000371120 PABPN1Q86U42 306 aaKnown RBP eCLIP21.45■■□□□ 1.02
ATG4C-203ENST00000371120 ATAD2BQ9ULI0 1458 aa21.44■■□□□ 1.02
ATG4C-203ENST00000371120 CC2D2AQ9P2K1 1620 aa21.34■■□□□ 1.01
ATG4C-203ENST00000371120 BAZ1BQ9UIG0 1483 aaKnown RBP21.25■□□□□ 0.99
ATG4C-203ENST00000371120 PRDM2Q13029 1718 aa21.21■□□□□ 0.99
ATG4C-203ENST00000371120 CCDC88BA6NC98 1476 aa21.02■□□□□ 0.95
ATG4C-203ENST00000371120 SUPT5HO00267 1087 aaKnown RBP20.9■□□□□ 0.94
ATG4C-203ENST00000371120 LAMC3Q9Y6N6 1575 aa20.88■□□□□ 0.93
ATG4C-203ENST00000371120 CFTRP13569 1480 aa20.84■□□□□ 0.93
ATG4C-203ENST00000371120 BIVM-ERCC5R4GMW8 1640 aa20.68■□□□□ 0.9
ATG4C-203ENST00000371120 CADPSQ9ULU8 1353 aa20.66■□□□□ 0.9
ATG4C-203ENST00000371120 TOP2BQ02880 1626 aa20.55■□□□□ 0.88
ATG4C-203ENST00000371120 ABCC8Q09428 1581 aa20.52■□□□□ 0.88
ATG4C-203ENST00000371120 DNMBPQ6XZF7 1577 aa20.46■□□□□ 0.87
ATG4C-203ENST00000371120 PDS5BQ9NTI5 1447 aa20.45■□□□□ 0.86
ATG4C-203ENST00000371120 KIF21AQ7Z4S6 1674 aa20.44■□□□□ 0.86
ATG4C-203ENST00000371120 WDR97A6NE52 1622 aa20.44■□□□□ 0.86
ATG4C-203ENST00000371120 FANCD2Q9BXW9 1451 aa20.42■□□□□ 0.86
ATG4C-203ENST00000371120 SYNJ1O43426 1573 aa20.4■□□□□ 0.86
ATG4C-203ENST00000371120 DNAJC5BQ9UF47 199 aa20.39■□□□□ 0.85
ATG4C-203ENST00000371120 CEP164Q9UPV0 1460 aa20.38■□□□□ 0.85
ATG4C-203ENST00000371120 WRNQ14191 1432 aaPredicted RBP eCLIP20.38■□□□□ 0.85
ATG4C-203ENST00000371120 CUX1P39880 1505 aa20.36■□□□□ 0.85
ATG4C-203ENST00000371120 WDR62O43379 1518 aa20.35■□□□□ 0.85
ATG4C-203ENST00000371120 THOC2Q8NI27 1593 aaKnown RBP20.34■□□□□ 0.85
ATG4C-203ENST00000371120 NESP48681 1621 aa20.3■□□□□ 0.84
ATG4C-203ENST00000371120 EEA1Q15075 1411 aa20.29■□□□□ 0.84
ATG4C-203ENST00000371120 CHIC1Q5VXU3 224 aa20.29■□□□□ 0.84
ATG4C-203ENST00000371120 MRC2Q9UBG0 1479 aa20.28■□□□□ 0.84
ATG4C-203ENST00000371120 TOPBP1Q92547 1522 aa20.25■□□□□ 0.83
ATG4C-203ENST00000371120 URB2Q14146 1524 aaKnown RBP20.21■□□□□ 0.83
ATG4C-203ENST00000371120 TARBP1Q13395 1621 aaKnown RBP20.14■□□□□ 0.82
ATG4C-203ENST00000371120 ABCA10Q8WWZ4 1543 aa20.14■□□□□ 0.81
ATG4C-203ENST00000371120 ABCA5Q8WWZ7 1642 aa20.12■□□□□ 0.81
ATG4C-203ENST00000371120 FGD5Q6ZNL6 1462 aa20.1■□□□□ 0.81
ATG4C-203ENST00000371120 KIF21BO75037 1637 aa20.08■□□□□ 0.81
ATG4C-203ENST00000371120 POLA1P09884 1462 aaPredicted RBP20.07■□□□□ 0.8
ATG4C-203ENST00000371120 CUL7Q14999 1698 aa20.04■□□□□ 0.8
ATG4C-203ENST00000371120 IFT140Q96RY7 1462 aa20.03■□□□□ 0.8
ATG4C-203ENST00000371120 ERICH3Q5RHP9 1530 aa20.01■□□□□ 0.79
ATG4C-203ENST00000371120 TRIM41Q8WV44 630 aa19.98■□□□□ 0.79
ATG4C-203ENST00000371120 CUX2O14529 1486 aa19.98■□□□□ 0.79
ATG4C-203ENST00000371120 ERCC6Q03468 1493 aa19.98■□□□□ 0.79
ATG4C-203ENST00000371120 PBRM1Q86U86 1689 aa19.97■□□□□ 0.79
ATG4C-203ENST00000371120 KIF27Q86VH2 1401 aa19.93■□□□□ 0.78
ATG4C-203ENST00000371120 SOGA1O94964 1423 aa19.87■□□□□ 0.77
ATG4C-203ENST00000371120 PRXQ9BXM0 1461 aa19.86■□□□□ 0.77
ATG4C-203ENST00000371120 EIF4G3O43432 1585 aaKnown RBP19.83■□□□□ 0.77
ATG4C-203ENST00000371120 ADAMTS12P58397 1594 aa19.81■□□□□ 0.76
ATG4C-203ENST00000371120 GOLGA3Q08378 1498 aa19.77■□□□□ 0.75
ATG4C-203ENST00000371120 RAD54L2Q9Y4B4 1467 aa19.75■□□□□ 0.75
ATG4C-203ENST00000371120 GAPVD1Q14C86 1478 aa19.75■□□□□ 0.75
ATG4C-203ENST00000371120 GRIN2BQ13224 1484 aa19.74■□□□□ 0.75
ATG4C-203ENST00000371120 MAGI1Q96QZ7 1491 aaPredicted RBP19.74■□□□□ 0.75
ATG4C-203ENST00000371120 CTTNBP2Q8WZ74 1663 aa19.74■□□□□ 0.75
ATG4C-203ENST00000371120 RUSC2Q8N2Y8 1516 aa19.71■□□□□ 0.75
ATG4C-203ENST00000371120 IGF1RP08069 1367 aa19.68■□□□□ 0.74
ATG4C-203ENST00000371120 RAPGEF2Q9Y4G8 1499 aa19.67■□□□□ 0.74
ATG4C-203ENST00000371120 FHAD1B1AJZ9 1412 aa19.65■□□□□ 0.74
ATG4C-203ENST00000371120 CSRNP3Q8WYN3 585 aa19.64■□□□□ 0.73
ATG4C-203ENST00000371120 TNIKQ9UKE5 1360 aa19.63■□□□□ 0.73
ATG4C-203ENST00000371120 ZNF608Q9ULD9 1512 aaPredicted RBP19.57■□□□□ 0.72
ATG4C-203ENST00000371120 SYNJ2O15056 1496 aa19.55■□□□□ 0.72
ATG4C-203ENST00000371120 EFCAB5A4FU69 1503 aa19.55■□□□□ 0.72
ATG4C-203ENST00000371120 CARMIL1Q5VZK9 1371 aa19.53■□□□□ 0.72
ATG4C-203ENST00000371120 SAMD9Q5K651 1589 aa19.5■□□□□ 0.71
ATG4C-203ENST00000371120 SNAPC4Q5SXM2 1469 aa19.5■□□□□ 0.71
ATG4C-203ENST00000371120 GRIN2AQ12879 1464 aa19.48■□□□□ 0.71
ATG4C-203ENST00000371120 NUP160Q12769 1436 aa19.47■□□□□ 0.71
ATG4C-203ENST00000371120 AQRO60306 1485 aaKnown RBP eCLIP19.45■□□□□ 0.7
ATG4C-203ENST00000371120 CHD1O14646 1710 aa19.45■□□□□ 0.7
ATG4C-203ENST00000371120 SHROOM2Q13796 1616 aa19.45■□□□□ 0.7
ATG4C-203ENST00000371120 UGGT2Q9NYU1 1516 aa19.44■□□□□ 0.7
ATG4C-203ENST00000371120 TDRD9Q8NDG6 1382 aaKnown RBP19.44■□□□□ 0.7
ATG4C-203ENST00000371120 IQGAP2Q13576 1575 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms