RNA–Protein interactions for RNA: ENST00000371033.9

PRELID3B-202, Transcript of PRELI domain containing 3B, humanhuman

TSL 2 BASIC

Gene PRELID3B, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRELID3B-202ENST00000371033 NISCHQ9Y2I1 1504 aa33.07■■■□□ 2.89
PRELID3B-202ENST00000371033 AEBP2Q6ZN18 517 aaPredicted RBP32.52■■■□□ 2.8
PRELID3B-202ENST00000371033 CHIC1Q5VXU3 224 aa31.53■■■□□ 2.64
PRELID3B-202ENST00000371033 CCDC180Q9P1Z9 1646 aa29.57■■■□□ 2.32
PRELID3B-202ENST00000371033 ABCC9O60706 1549 aa29.47■■■□□ 2.31
PRELID3B-202ENST00000371033 RB1CC1Q8TDY2 1594 aa28.14■■■□□ 2.1
PRELID3B-202ENST00000371033 NACADO15069 1562 aa28.03■■■□□ 2.08
PRELID3B-202ENST00000371033 DCAF8L2P0C7V8 631 aa27.82■■■□□ 2.04
PRELID3B-202ENST00000371033 MYO15BQ96JP2 1530 aa27.77■■■□□ 2.04
PRELID3B-202ENST00000371033 SENP3Q9H4L4 574 aaPredicted RBP27.76■■■□□ 2.03
PRELID3B-202ENST00000371033 DNAJC5BQ9UF47 199 aa27.74■■■□□ 2.03
PRELID3B-202ENST00000371033 PHF23Q9BUL5 403 aaPredicted RBP27.64■■■□□ 2.02
PRELID3B-202ENST00000371033 PABPN1Q86U42 306 aaKnown RBP eCLIP27.51■■□□□ 1.99
PRELID3B-202ENST00000371033 DCAF1Q9Y4B6 1507 aa27.41■■□□□ 1.98
PRELID3B-202ENST00000371033 ZCCHC6Q5VYS8 1495 aaKnown RBP27.39■■□□□ 1.98
PRELID3B-202ENST00000371033 UNC13AQ9UPW8 1703 aa27.38■■□□□ 1.97
PRELID3B-202ENST00000371033 BICRAQ9NZM4 1560 aa27.33■■□□□ 1.97
PRELID3B-202ENST00000371033 SHROOM4Q9ULL8 1493 aa27.07■■□□□ 1.92
PRELID3B-202ENST00000371033 SCRIBQ14160 1630 aa26.83■■□□□ 1.89
PRELID3B-202ENST00000371033 CC2D2AQ9P2K1 1620 aa26.64■■□□□ 1.85
PRELID3B-202ENST00000371033 EIF4G1Q04637 1599 aaKnown RBP26.63■■□□□ 1.85
PRELID3B-202ENST00000371033 CECR2Q9BXF3 1484 aa26.6■■□□□ 1.85
PRELID3B-202ENST00000371033 NCAPD3P42695 1498 aa25.96■■□□□ 1.75
PRELID3B-202ENST00000371033 ATAD2BQ9ULI0 1458 aa25.8■■□□□ 1.72
PRELID3B-202ENST00000371033 FOXD1Q16676 465 aa25.73■■□□□ 1.71
PRELID3B-202ENST00000371033 SMARCA4P51532 1647 aa25.7■■□□□ 1.71
PRELID3B-202ENST00000371033 SMARCA2P51531 1590 aa25.7■■□□□ 1.71
PRELID3B-202ENST00000371033 HMGXB3Q12766 1538 aa25.65■■□□□ 1.7
PRELID3B-202ENST00000371033 BAZ1AQ9NRL2 1556 aaPredicted RBP25.65■■□□□ 1.7
PRELID3B-202ENST00000371033 PEG3Q9GZU2 1588 aa25.56■■□□□ 1.68
PRELID3B-202ENST00000371033 PLPPR3Q6T4P5 718 aa25.52■■□□□ 1.68
PRELID3B-202ENST00000371033 DNAJC5Q9H3Z4 198 aa25.5■■□□□ 1.67
PRELID3B-202ENST00000371033 BAZ1BQ9UIG0 1483 aaKnown RBP25.48■■□□□ 1.67
PRELID3B-202ENST00000371033 CUX2O14529 1486 aa25.47■■□□□ 1.67
PRELID3B-202ENST00000371033 MROH2BQ7Z745 1585 aa25.44■■□□□ 1.66
PRELID3B-202ENST00000371033 ERCC6Q03468 1493 aa25.43■■□□□ 1.66
PRELID3B-202ENST00000371033 NESP48681 1621 aa25.35■■□□□ 1.65
PRELID3B-202ENST00000371033 LAMC3Q9Y6N6 1575 aa25.24■■□□□ 1.63
PRELID3B-202ENST00000371033 PDS5BQ9NTI5 1447 aa25.15■■□□□ 1.62
PRELID3B-202ENST00000371033 CADPSQ9ULU8 1353 aa25.14■■□□□ 1.61
PRELID3B-202ENST00000371033 WIZO95785 1651 aa25.07■■□□□ 1.6
PRELID3B-202ENST00000371033 THOC2Q8NI27 1593 aaKnown RBP25.05■■□□□ 1.6
PRELID3B-202ENST00000371033 RSF1Q96T23 1441 aaPredicted RBP25.01■■□□□ 1.59
PRELID3B-202ENST00000371033 KIF21AQ7Z4S6 1674 aa24.94■■□□□ 1.58
PRELID3B-202ENST00000371033 CFTRP13569 1480 aa24.85■■□□□ 1.57
PRELID3B-202ENST00000371033 MRC2Q9UBG0 1479 aa24.85■■□□□ 1.57
PRELID3B-202ENST00000371033 TOP2AP11388 1531 aaKnown RBP24.81■■□□□ 1.56
PRELID3B-202ENST00000371033 WDR62O43379 1518 aa24.79■■□□□ 1.56
PRELID3B-202ENST00000371033 FANCD2Q9BXW9 1451 aa24.76■■□□□ 1.55
PRELID3B-202ENST00000371033 CEP164Q9UPV0 1460 aa24.75■■□□□ 1.55
PRELID3B-202ENST00000371033 CCDC88BA6NC98 1476 aa24.58■■□□□ 1.53
PRELID3B-202ENST00000371033 URB2Q14146 1524 aaKnown RBP24.54■■□□□ 1.52
PRELID3B-202ENST00000371033 ADRA2BP18089 450 aa24.5■■□□□ 1.51
PRELID3B-202ENST00000371033 PPP6R1Q9UPN7 881 aa24.49■■□□□ 1.51
PRELID3B-202ENST00000371033 OSCARQ8IYS5 282 aa24.41■■□□□ 1.5
PRELID3B-202ENST00000371033 PRDM2Q13029 1718 aa24.4■■□□□ 1.5
PRELID3B-202ENST00000371033 ABCC8Q09428 1581 aa24.35■■□□□ 1.49
PRELID3B-202ENST00000371033 IFT140Q96RY7 1462 aa24.31■■□□□ 1.48
PRELID3B-202ENST00000371033 TOPBP1Q92547 1522 aa24.3■■□□□ 1.48
PRELID3B-202ENST00000371033 PIAS4Q8N2W9 510 aaPredicted RBP24.26■■□□□ 1.47
PRELID3B-202ENST00000371033 ZNF608Q9ULD9 1512 aaPredicted RBP24.2■■□□□ 1.47
PRELID3B-202ENST00000371033 DNMBPQ6XZF7 1577 aa24.18■■□□□ 1.46
PRELID3B-202ENST00000371033 TRIM41Q8WV44 630 aa24.18■■□□□ 1.46
PRELID3B-202ENST00000371033 TARBP1Q13395 1621 aaKnown RBP24.06■■□□□ 1.44
PRELID3B-202ENST00000371033 POLA1P09884 1462 aaPredicted RBP24.06■■□□□ 1.44
PRELID3B-202ENST00000371033 AQRO60306 1485 aaKnown RBP eCLIP24.03■■□□□ 1.442e-7■■■■■ 47
PRELID3B-202ENST00000371033 EIF4G3O43432 1585 aaKnown RBP24■■□□□ 1.43
PRELID3B-202ENST00000371033 SOGA1O94964 1423 aa24■■□□□ 1.43
PRELID3B-202ENST00000371033 RAD54L2Q9Y4B4 1467 aa23.94■■□□□ 1.42
PRELID3B-202ENST00000371033 MSH5O43196 834 aa23.93■■□□□ 1.42
PRELID3B-202ENST00000371033 TDRD9Q8NDG6 1382 aaKnown RBP23.91■■□□□ 1.42
PRELID3B-202ENST00000371033 RIMBP3CA6NJZ7 1639 aa23.88■■□□□ 1.41
PRELID3B-202ENST00000371033 RIMBP3BA6NNM3 1639 aa23.88■■□□□ 1.41
PRELID3B-202ENST00000371033 RIMBP3Q9UFD9 1639 aa23.88■■□□□ 1.41
PRELID3B-202ENST00000371033 CUX1P39880 1505 aa23.88■■□□□ 1.41
PRELID3B-202ENST00000371033 WDR97A6NE52 1622 aa23.88■■□□□ 1.41
PRELID3B-202ENST00000371033 FGD5Q6ZNL6 1462 aa23.87■■□□□ 1.41
PRELID3B-202ENST00000371033 ARHGEF11O15085 1522 aa23.87■■□□□ 1.41
PRELID3B-202ENST00000371033 SUPT5HO00267 1087 aaKnown RBP23.86■■□□□ 1.41
PRELID3B-202ENST00000371033 FBLN2P98095 1184 aa23.82■■□□□ 1.4
PRELID3B-202ENST00000371033 CHD1O14646 1710 aa23.77■■□□□ 1.4
PRELID3B-202ENST00000371033 GRIN2BQ13224 1484 aa23.76■■□□□ 1.39
PRELID3B-202ENST00000371033 CYB5RLQ6IPT4 315 aa23.76■■□□□ 1.39
PRELID3B-202ENST00000371033 MAGI1Q96QZ7 1491 aaPredicted RBP23.75■■□□□ 1.39
PRELID3B-202ENST00000371033 CHMP7Q8WUX9 453 aaPredicted RBP23.75■■□□□ 1.39
PRELID3B-202ENST00000371033 SNAPC4Q5SXM2 1469 aa23.73■■□□□ 1.39
PRELID3B-202ENST00000371033 ABCA10Q8WWZ4 1543 aa23.69■■□□□ 1.38
PRELID3B-202ENST00000371033 GAPVD1Q14C86 1478 aa23.68■■□□□ 1.38
PRELID3B-202ENST00000371033 SYNJ2O15056 1496 aa23.67■■□□□ 1.38
PRELID3B-202ENST00000371033 ARAP1Q96P48 1450 aa23.63■■□□□ 1.37
PRELID3B-202ENST00000371033 CLASP1Q7Z460 1538 aa23.63■■□□□ 1.37
PRELID3B-202ENST00000371033 WRNQ14191 1432 aaPredicted RBP eCLIP23.62■■□□□ 1.37
PRELID3B-202ENST00000371033 SYNJ1O43426 1573 aa23.59■■□□□ 1.37
PRELID3B-202ENST00000371033 ABCA5Q8WWZ7 1642 aa23.55■■□□□ 1.36
PRELID3B-202ENST00000371033 TOP2BQ02880 1626 aa23.53■■□□□ 1.36
PRELID3B-202ENST00000371033 PBRM1Q86U86 1689 aa23.5■■□□□ 1.35
PRELID3B-202ENST00000371033 BIVM-ERCC5R4GMW8 1640 aa23.49■■□□□ 1.35
PRELID3B-202ENST00000371033 GRIN2AQ12879 1464 aa23.43■■□□□ 1.34
PRELID3B-202ENST00000371033 FHAD1B1AJZ9 1412 aa23.41■■□□□ 1.34
PRELID3B-202ENST00000371033 TRHP20396 242 aaPredicted RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms