RNA–Protein interactions for RNA: ENST00000370481.8

GBP3-202, Transcript of guanylate binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GBP3, Length 3,067 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-202ENST00000370481 NISCHQ9Y2I1 1504 aa14.88□□□□□ -0.03
GBP3-202ENST00000370481 CCDC180Q9P1Z9 1646 aa13.19□□□□□ -0.3
GBP3-202ENST00000370481 ABCC9O60706 1549 aa12.49□□□□□ -0.41
GBP3-202ENST00000370481 ZCCHC6Q5VYS8 1495 aaKnown RBP12.47□□□□□ -0.41
GBP3-202ENST00000370481 DCAF1Q9Y4B6 1507 aa12.42□□□□□ -0.42
GBP3-202ENST00000370481 MYO15BQ96JP2 1530 aa12.4□□□□□ -0.42
GBP3-202ENST00000370481 NACADO15069 1562 aa12.32□□□□□ -0.44
GBP3-202ENST00000370481 RB1CC1Q8TDY2 1594 aa12.24□□□□□ -0.45
GBP3-202ENST00000370481 DCAF8L2P0C7V8 631 aa12.11□□□□□ -0.47
GBP3-202ENST00000370481 UNC13AQ9UPW8 1703 aa11.92□□□□□ -0.5
GBP3-202ENST00000370481 SCRIBQ14160 1630 aa11.92□□□□□ -0.5
GBP3-202ENST00000370481 SHROOM4Q9ULL8 1493 aa11.87□□□□□ -0.51
GBP3-202ENST00000370481 AEBP2Q6ZN18 517 aaPredicted RBP11.85□□□□□ -0.51
GBP3-202ENST00000370481 BICRAQ9NZM4 1560 aa11.84□□□□□ -0.51
GBP3-202ENST00000370481 PABPN1Q86U42 306 aaKnown RBP eCLIP11.66□□□□□ -0.54
GBP3-202ENST00000370481 BAZ1AQ9NRL2 1556 aaPredicted RBP11.53□□□□□ -0.56
GBP3-202ENST00000370481 EIF4G1Q04637 1599 aaKnown RBP11.5□□□□□ -0.57
GBP3-202ENST00000370481 SMARCA4P51532 1647 aa11.49□□□□□ -0.57
GBP3-202ENST00000370481 CECR2Q9BXF3 1484 aa11.49□□□□□ -0.57
GBP3-202ENST00000370481 PEG3Q9GZU2 1588 aa11.44□□□□□ -0.58
GBP3-202ENST00000370481 MROH2BQ7Z745 1585 aa11.43□□□□□ -0.58
GBP3-202ENST00000370481 RSF1Q96T23 1441 aaPredicted RBP11.4□□□□□ -0.58
GBP3-202ENST00000370481 SMARCA2P51531 1590 aa11.39□□□□□ -0.59
GBP3-202ENST00000370481 CC2D2AQ9P2K1 1620 aa11.36□□□□□ -0.59
GBP3-202ENST00000370481 ATAD2BQ9ULI0 1458 aa11.35□□□□□ -0.59
GBP3-202ENST00000370481 NCAPD3P42695 1498 aa11.34□□□□□ -0.59
GBP3-202ENST00000370481 HMGXB3Q12766 1538 aa11.34□□□□□ -0.59
GBP3-202ENST00000370481 WIZO95785 1651 aa11.3□□□□□ -0.6
GBP3-202ENST00000370481 TOP2AP11388 1531 aaKnown RBP11.27□□□□□ -0.61
GBP3-202ENST00000370481 BAZ1BQ9UIG0 1483 aaKnown RBP11.26□□□□□ -0.61
GBP3-202ENST00000370481 DNAJC5BQ9UF47 199 aa11.19□□□□□ -0.62
GBP3-202ENST00000370481 CHIC1Q5VXU3 224 aa11.18□□□□□ -0.62
GBP3-202ENST00000370481 SUPT5HO00267 1087 aaKnown RBP11.15□□□□□ -0.62
GBP3-202ENST00000370481 CCDC88BA6NC98 1476 aa11.08□□□□□ -0.64
GBP3-202ENST00000370481 LAMC3Q9Y6N6 1575 aa11.01□□□□□ -0.65
GBP3-202ENST00000370481 CFTRP13569 1480 aa11□□□□□ -0.65
GBP3-202ENST00000370481 CADPSQ9ULU8 1353 aa10.99□□□□□ -0.65
GBP3-202ENST00000370481 PRDM2Q13029 1718 aa10.97□□□□□ -0.65
GBP3-202ENST00000370481 PDS5BQ9NTI5 1447 aa10.89□□□□□ -0.67
GBP3-202ENST00000370481 NESP48681 1621 aa10.88□□□□□ -0.67
GBP3-202ENST00000370481 FANCD2Q9BXW9 1451 aa10.85□□□□□ -0.67
GBP3-202ENST00000370481 CEP164Q9UPV0 1460 aa10.82□□□□□ -0.68
GBP3-202ENST00000370481 KIF21AQ7Z4S6 1674 aa10.8□□□□□ -0.68
GBP3-202ENST00000370481 ABCC8Q09428 1581 aa10.79□□□□□ -0.68
GBP3-202ENST00000370481 MRC2Q9UBG0 1479 aa10.77□□□□□ -0.68
GBP3-202ENST00000370481 ERCC6Q03468 1493 aa10.77□□□□□ -0.69
GBP3-202ENST00000370481 DNMBPQ6XZF7 1577 aa10.75□□□□□ -0.69
GBP3-202ENST00000370481 THOC2Q8NI27 1593 aaKnown RBP10.75□□□□□ -0.69
GBP3-202ENST00000370481 WDR62O43379 1518 aa10.75□□□□□ -0.69
GBP3-202ENST00000370481 BIVM-ERCC5R4GMW8 1640 aa10.74□□□□□ -0.69
GBP3-202ENST00000370481 WRNQ14191 1432 aaPredicted RBP eCLIP10.74□□□□□ -0.69
GBP3-202ENST00000370481 TOP2BQ02880 1626 aa10.73□□□□□ -0.69
GBP3-202ENST00000370481 URB2Q14146 1524 aaKnown RBP10.72□□□□□ -0.69
GBP3-202ENST00000370481 CUX1P39880 1505 aa10.72□□□□□ -0.69
GBP3-202ENST00000370481 TOPBP1Q92547 1522 aa10.71□□□□□ -0.69
GBP3-202ENST00000370481 SYNJ1O43426 1573 aa10.69□□□□□ -0.7
GBP3-202ENST00000370481 CUX2O14529 1486 aa10.66□□□□□ -0.7
GBP3-202ENST00000370481 FGD5Q6ZNL6 1462 aa10.63□□□□□ -0.71
GBP3-202ENST00000370481 WDR97A6NE52 1622 aa10.63□□□□□ -0.71
GBP3-202ENST00000370481 POLA1P09884 1462 aaPredicted RBP10.63□□□□□ -0.71
GBP3-202ENST00000370481 IFT140Q96RY7 1462 aa10.62□□□□□ -0.71
GBP3-202ENST00000370481 TARBP1Q13395 1621 aaKnown RBP10.6□□□□□ -0.71
GBP3-202ENST00000370481 ABCA10Q8WWZ4 1543 aa10.59□□□□□ -0.71
GBP3-202ENST00000370481 TRIM41Q8WV44 630 aa10.59□□□□□ -0.71
GBP3-202ENST00000370481 SOGA1O94964 1423 aa10.57□□□□□ -0.72
GBP3-202ENST00000370481 EEA1Q15075 1411 aa10.54□□□□□ -0.72
GBP3-202ENST00000370481 RAD54L2Q9Y4B4 1467 aa10.53□□□□□ -0.72
GBP3-202ENST00000370481 ABCA5Q8WWZ7 1642 aa10.53□□□□□ -0.72
GBP3-202ENST00000370481 KIF27Q86VH2 1401 aa10.51□□□□□ -0.73
GBP3-202ENST00000370481 ERICH3Q5RHP9 1530 aa10.48□□□□□ -0.73
GBP3-202ENST00000370481 EIF4G3O43432 1585 aaKnown RBP10.48□□□□□ -0.73
GBP3-202ENST00000370481 GAPVD1Q14C86 1478 aa10.47□□□□□ -0.73
GBP3-202ENST00000370481 ZNF608Q9ULD9 1512 aaPredicted RBP10.46□□□□□ -0.73
GBP3-202ENST00000370481 GRIN2BQ13224 1484 aa10.46□□□□□ -0.73
GBP3-202ENST00000370481 PBRM1Q86U86 1689 aa10.45□□□□□ -0.74
GBP3-202ENST00000370481 CUL7Q14999 1698 aa10.44□□□□□ -0.74
GBP3-202ENST00000370481 TDRD9Q8NDG6 1382 aaKnown RBP10.43□□□□□ -0.74
GBP3-202ENST00000370481 MAGI1Q96QZ7 1491 aaPredicted RBP10.43□□□□□ -0.74
GBP3-202ENST00000370481 AQRO60306 1485 aaKnown RBP eCLIP10.42□□□□□ -0.74
GBP3-202ENST00000370481 IGF1RP08069 1367 aa10.42□□□□□ -0.74
GBP3-202ENST00000370481 RUSC2Q8N2Y8 1516 aa10.41□□□□□ -0.74
GBP3-202ENST00000370481 ADAMTS12P58397 1594 aa10.4□□□□□ -0.74
GBP3-202ENST00000370481 FHAD1B1AJZ9 1412 aa10.39□□□□□ -0.75
GBP3-202ENST00000370481 PRXQ9BXM0 1461 aa10.39□□□□□ -0.75
GBP3-202ENST00000370481 KIF21BO75037 1637 aa10.39□□□□□ -0.75
GBP3-202ENST00000370481 CSRNP3Q8WYN3 585 aa10.38□□□□□ -0.75
GBP3-202ENST00000370481 SNAPC4Q5SXM2 1469 aa10.37□□□□□ -0.75
GBP3-202ENST00000370481 SYNJ2O15056 1496 aa10.36□□□□□ -0.75
GBP3-202ENST00000370481 CARMIL1Q5VZK9 1371 aa10.35□□□□□ -0.75
GBP3-202ENST00000370481 RAPGEF2Q9Y4G8 1499 aa10.35□□□□□ -0.75
GBP3-202ENST00000370481 GRIN2AQ12879 1464 aa10.32□□□□□ -0.76
GBP3-202ENST00000370481 GOLGA3Q08378 1498 aa10.31□□□□□ -0.76
GBP3-202ENST00000370481 NUP160Q12769 1436 aa10.29□□□□□ -0.76
GBP3-202ENST00000370481 CHD1O14646 1710 aa10.28□□□□□ -0.76
GBP3-202ENST00000370481 FAM9AQ8IZU1 332 aaPredicted RBP10.26□□□□□ -0.77
GBP3-202ENST00000370481 CHMP7Q8WUX9 453 aaPredicted RBP10.26□□□□□ -0.77
GBP3-202ENST00000370481 PHF23Q9BUL5 403 aaPredicted RBP10.25□□□□□ -0.77
GBP3-202ENST00000370481 CTTNBP2Q8WZ74 1663 aa10.25□□□□□ -0.77
GBP3-202ENST00000370481 CEP170Q5SW79 1584 aa10.24□□□□□ -0.77
GBP3-202ENST00000370481 KIAA0586Q9BVV6 1533 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 183.8 ms