RNA–Protein interactions for RNA: ENST00000369717.8

TMIGD3-202, Transcript of transmembrane and immunoglobulin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene TMIGD3, Length 1,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3-202ENST00000369717 NISCHQ9Y2I1 1504 aa24.65■■□□□ 1.54
TMIGD3-202ENST00000369717 CCDC180Q9P1Z9 1646 aa21.92■■□□□ 1.1
TMIGD3-202ENST00000369717 ABCC9O60706 1549 aa21.56■■□□□ 1.04
TMIGD3-202ENST00000369717 RB1CC1Q8TDY2 1594 aa20.73■□□□□ 0.91
TMIGD3-202ENST00000369717 NACADO15069 1562 aa20.72■□□□□ 0.91
TMIGD3-202ENST00000369717 MYO15BQ96JP2 1530 aa20.67■□□□□ 0.9
TMIGD3-202ENST00000369717 DCAF8L2P0C7V8 631 aa20.5■□□□□ 0.87
TMIGD3-202ENST00000369717 ZCCHC6Q5VYS8 1495 aaKnown RBP20.48■□□□□ 0.87
TMIGD3-202ENST00000369717 DCAF1Q9Y4B6 1507 aa20.48■□□□□ 0.87
TMIGD3-202ENST00000369717 PABPN1Q86U42 306 aaKnown RBP eCLIP20.15■□□□□ 0.82
TMIGD3-202ENST00000369717 BICRAQ9NZM4 1560 aa20.13■□□□□ 0.81
TMIGD3-202ENST00000369717 UNC13AQ9UPW8 1703 aa20.12■□□□□ 0.81
TMIGD3-202ENST00000369717 DNAJC5BQ9UF47 199 aa20.08■□□□□ 0.81
TMIGD3-202ENST00000369717 SHROOM4Q9ULL8 1493 aa20.03■□□□□ 0.8
TMIGD3-202ENST00000369717 SCRIBQ14160 1630 aa19.87■□□□□ 0.77
TMIGD3-202ENST00000369717 EIF4G1Q04637 1599 aaKnown RBP19.59■□□□□ 0.73
TMIGD3-202ENST00000369717 CC2D2AQ9P2K1 1620 aa19.52■□□□□ 0.72
TMIGD3-202ENST00000369717 CECR2Q9BXF3 1484 aa19.46■□□□□ 0.71
TMIGD3-202ENST00000369717 AEBP2Q6ZN18 517 aaPredicted RBP19.22■□□□□ 0.67
TMIGD3-202ENST00000369717 NCAPD3P42695 1498 aa19.2■□□□□ 0.66
TMIGD3-202ENST00000369717 ATAD2BQ9ULI0 1458 aa19.11■□□□□ 0.65
TMIGD3-202ENST00000369717 BAZ1AQ9NRL2 1556 aaPredicted RBP19.09■□□□□ 0.65
TMIGD3-202ENST00000369717 SMARCA4P51532 1647 aa19.08■□□□□ 0.65
TMIGD3-202ENST00000369717 SMARCA2P51531 1590 aa19.05■□□□□ 0.64
TMIGD3-202ENST00000369717 PEG3Q9GZU2 1588 aa19.02■□□□□ 0.63
TMIGD3-202ENST00000369717 HMGXB3Q12766 1538 aa19■□□□□ 0.63
TMIGD3-202ENST00000369717 MROH2BQ7Z745 1585 aa18.94■□□□□ 0.62
TMIGD3-202ENST00000369717 BAZ1BQ9UIG0 1483 aaKnown RBP18.87■□□□□ 0.61
TMIGD3-202ENST00000369717 RSF1Q96T23 1441 aaPredicted RBP18.73■□□□□ 0.59
TMIGD3-202ENST00000369717 WIZO95785 1651 aa18.64■□□□□ 0.57
TMIGD3-202ENST00000369717 NESP48681 1621 aa18.63■□□□□ 0.57
TMIGD3-202ENST00000369717 LAMC3Q9Y6N6 1575 aa18.61■□□□□ 0.57
TMIGD3-202ENST00000369717 CADPSQ9ULU8 1353 aa18.59■□□□□ 0.57
TMIGD3-202ENST00000369717 CUX2O14529 1486 aa18.58■□□□□ 0.57
TMIGD3-202ENST00000369717 ERCC6Q03468 1493 aa18.58■□□□□ 0.57
TMIGD3-202ENST00000369717 CHIC1Q5VXU3 224 aa18.55■□□□□ 0.56
TMIGD3-202ENST00000369717 PDS5BQ9NTI5 1447 aa18.53■□□□□ 0.56
TMIGD3-202ENST00000369717 TOP2AP11388 1531 aaKnown RBP18.51■□□□□ 0.55
TMIGD3-202ENST00000369717 CFTRP13569 1480 aa18.45■□□□□ 0.54
TMIGD3-202ENST00000369717 THOC2Q8NI27 1593 aaKnown RBP18.38■□□□□ 0.53
TMIGD3-202ENST00000369717 CCDC88BA6NC98 1476 aa18.33■□□□□ 0.52
TMIGD3-202ENST00000369717 KIF21AQ7Z4S6 1674 aa18.31■□□□□ 0.52
TMIGD3-202ENST00000369717 FANCD2Q9BXW9 1451 aa18.3■□□□□ 0.52
TMIGD3-202ENST00000369717 MRC2Q9UBG0 1479 aa18.3■□□□□ 0.52
TMIGD3-202ENST00000369717 DNAJC5Q9H3Z4 198 aa18.28■□□□□ 0.52
TMIGD3-202ENST00000369717 CEP164Q9UPV0 1460 aa18.26■□□□□ 0.51
TMIGD3-202ENST00000369717 WDR62O43379 1518 aa18.26■□□□□ 0.51
TMIGD3-202ENST00000369717 URB2Q14146 1524 aaKnown RBP18.13■□□□□ 0.49
TMIGD3-202ENST00000369717 PRDM2Q13029 1718 aa18.07■□□□□ 0.48
TMIGD3-202ENST00000369717 ABCC8Q09428 1581 aa18.05■□□□□ 0.48
TMIGD3-202ENST00000369717 TOPBP1Q92547 1522 aa17.99■□□□□ 0.47
TMIGD3-202ENST00000369717 SUPT5HO00267 1087 aaKnown RBP17.96■□□□□ 0.47
TMIGD3-202ENST00000369717 IFT140Q96RY7 1462 aa17.95■□□□□ 0.46
TMIGD3-202ENST00000369717 DNMBPQ6XZF7 1577 aa17.93■□□□□ 0.46
TMIGD3-202ENST00000369717 ZNF608Q9ULD9 1512 aaPredicted RBP17.83■□□□□ 0.45
TMIGD3-202ENST00000369717 POLA1P09884 1462 aaPredicted RBP17.83■□□□□ 0.45
TMIGD3-202ENST00000369717 TARBP1Q13395 1621 aaKnown RBP17.8■□□□□ 0.44
TMIGD3-202ENST00000369717 OSCARQ8IYS5 282 aa17.8■□□□□ 0.44
TMIGD3-202ENST00000369717 CUX1P39880 1505 aa17.77■□□□□ 0.44
TMIGD3-202ENST00000369717 SOGA1O94964 1423 aa17.77■□□□□ 0.44
TMIGD3-202ENST00000369717 AQRO60306 1485 aaKnown RBP eCLIP17.72■□□□□ 0.43
TMIGD3-202ENST00000369717 FGD5Q6ZNL6 1462 aa17.72■□□□□ 0.43
TMIGD3-202ENST00000369717 RAD54L2Q9Y4B4 1467 aa17.71■□□□□ 0.43
TMIGD3-202ENST00000369717 WDR97A6NE52 1622 aa17.7■□□□□ 0.42
TMIGD3-202ENST00000369717 EIF4G3O43432 1585 aaKnown RBP17.69■□□□□ 0.42
TMIGD3-202ENST00000369717 TDRD9Q8NDG6 1382 aaKnown RBP17.66■□□□□ 0.42
TMIGD3-202ENST00000369717 ABCA10Q8WWZ4 1543 aa17.62■□□□□ 0.41
TMIGD3-202ENST00000369717 WRNQ14191 1432 aaPredicted RBP eCLIP17.62■□□□□ 0.41
TMIGD3-202ENST00000369717 GRIN2BQ13224 1484 aa17.58■□□□□ 0.41
TMIGD3-202ENST00000369717 TOP2BQ02880 1626 aa17.58■□□□□ 0.4
TMIGD3-202ENST00000369717 MAGI1Q96QZ7 1491 aaPredicted RBP17.56■□□□□ 0.4
TMIGD3-202ENST00000369717 GAPVD1Q14C86 1478 aa17.55■□□□□ 0.4
TMIGD3-202ENST00000369717 BIVM-ERCC5R4GMW8 1640 aa17.54■□□□□ 0.4
TMIGD3-202ENST00000369717 SNAPC4Q5SXM2 1469 aa17.51■□□□□ 0.39
TMIGD3-202ENST00000369717 SYNJ1O43426 1573 aa17.51■□□□□ 0.39
TMIGD3-202ENST00000369717 ABCA5Q8WWZ7 1642 aa17.49■□□□□ 0.39
TMIGD3-202ENST00000369717 SYNJ2O15056 1496 aa17.49■□□□□ 0.39
TMIGD3-202ENST00000369717 CHMP7Q8WUX9 453 aaPredicted RBP17.48■□□□□ 0.39
TMIGD3-202ENST00000369717 FBLN2P98095 1184 aa17.47■□□□□ 0.39
TMIGD3-202ENST00000369717 ARHGEF11O15085 1522 aa17.43■□□□□ 0.38
TMIGD3-202ENST00000369717 CHD1O14646 1710 aa17.43■□□□□ 0.38
TMIGD3-202ENST00000369717 ERICH3Q5RHP9 1530 aa17.4■□□□□ 0.38
TMIGD3-202ENST00000369717 CLASP1Q7Z460 1538 aa17.4■□□□□ 0.38
TMIGD3-202ENST00000369717 RIMBP3CA6NJZ7 1639 aa17.39■□□□□ 0.37
TMIGD3-202ENST00000369717 RIMBP3BA6NNM3 1639 aa17.39■□□□□ 0.37
TMIGD3-202ENST00000369717 RIMBP3Q9UFD9 1639 aa17.39■□□□□ 0.37
TMIGD3-202ENST00000369717 TRIM41Q8WV44 630 aa17.38■□□□□ 0.37
TMIGD3-202ENST00000369717 FHAD1B1AJZ9 1412 aa17.38■□□□□ 0.37
TMIGD3-202ENST00000369717 PBRM1Q86U86 1689 aa17.36■□□□□ 0.37
TMIGD3-202ENST00000369717 GRIN2AQ12879 1464 aa17.33■□□□□ 0.37
TMIGD3-202ENST00000369717 NUP160Q12769 1436 aa17.33■□□□□ 0.36
TMIGD3-202ENST00000369717 ADAMTS12P58397 1594 aa17.32■□□□□ 0.36
TMIGD3-202ENST00000369717 IGF1RP08069 1367 aa17.3■□□□□ 0.36
TMIGD3-202ENST00000369717 ARAP1Q96P48 1450 aa17.29■□□□□ 0.36
TMIGD3-202ENST00000369717 CYB5RLQ6IPT4 315 aa17.28■□□□□ 0.36
TMIGD3-202ENST00000369717 KIF27Q86VH2 1401 aa17.27■□□□□ 0.35
TMIGD3-202ENST00000369717 CEP170Q5SW79 1584 aa17.21■□□□□ 0.35
TMIGD3-202ENST00000369717 SHROOM2Q13796 1616 aa17.16■□□□□ 0.34
TMIGD3-202ENST00000369717 JPH4Q96JJ6 628 aa17.15■□□□□ 0.34
TMIGD3-202ENST00000369717 CARMIL1Q5VZK9 1371 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms