RNA–Protein interactions for RNA: ENST00000369541.3

BCAS2-201, Transcript of BCAS2, pre-mRNA processing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BCAS2, Length 1,299 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS2-201ENST00000369541 NISCHQ9Y2I1 1504 aa32.57■■■□□ 2.8
BCAS2-201ENST00000369541 ABCC9O60706 1549 aa30.71■■■□□ 2.51
BCAS2-201ENST00000369541 DNAJC5BQ9UF47 199 aa29.86■■■□□ 2.37
BCAS2-201ENST00000369541 CCDC180Q9P1Z9 1646 aa29.46■■■□□ 2.31
BCAS2-201ENST00000369541 RB1CC1Q8TDY2 1594 aa28.65■■■□□ 2.18
BCAS2-201ENST00000369541 PABPN1Q86U42 306 aaKnown RBP eCLIP28.57■■■□□ 2.16
BCAS2-201ENST00000369541 NACADO15069 1562 aa28.23■■■□□ 2.11
BCAS2-201ENST00000369541 DCAF8L2P0C7V8 631 aa28.18■■■□□ 2.1
BCAS2-201ENST00000369541 DNAJC5Q9H3Z4 198 aa28.13■■■□□ 2.09
BCAS2-201ENST00000369541 BICRAQ9NZM4 1560 aa27.89■■■□□ 2.05
BCAS2-201ENST00000369541 UNC13AQ9UPW8 1703 aa27.82■■■□□ 2.04
BCAS2-201ENST00000369541 CECR2Q9BXF3 1484 aa27.76■■■□□ 2.04
BCAS2-201ENST00000369541 CC2D2AQ9P2K1 1620 aa27.58■■■□□ 2.01
BCAS2-201ENST00000369541 MYO15BQ96JP2 1530 aa27.51■■□□□ 1.99
BCAS2-201ENST00000369541 SHROOM4Q9ULL8 1493 aa27.35■■□□□ 1.97
BCAS2-201ENST00000369541 EIF4G1Q04637 1599 aaKnown RBP27.28■■□□□ 1.96
BCAS2-201ENST00000369541 SCRIBQ14160 1630 aa26.91■■□□□ 1.9
BCAS2-201ENST00000369541 CUX2O14529 1486 aa26.81■■□□□ 1.88
BCAS2-201ENST00000369541 DCAF1Q9Y4B6 1507 aa26.79■■□□□ 1.88
BCAS2-201ENST00000369541 ZCCHC6Q5VYS8 1495 aaKnown RBP26.74■■□□□ 1.87
BCAS2-201ENST00000369541 ERCC6Q03468 1493 aa26.56■■□□□ 1.84
BCAS2-201ENST00000369541 TRIM41Q8WV44 630 aa26.49■■□□□ 1.83
BCAS2-201ENST00000369541 NCAPD3P42695 1498 aa26.18■■□□□ 1.78
BCAS2-201ENST00000369541 NESP48681 1621 aa26.09■■□□□ 1.77
BCAS2-201ENST00000369541 ATAD2BQ9ULI0 1458 aa25.95■■□□□ 1.74
BCAS2-201ENST00000369541 THOC2Q8NI27 1593 aaKnown RBP25.86■■□□□ 1.73
BCAS2-201ENST00000369541 HMGXB3Q12766 1538 aa25.77■■□□□ 1.72
BCAS2-201ENST00000369541 SMARCA2P51531 1590 aa25.73■■□□□ 1.71
BCAS2-201ENST00000369541 PDS5BQ9NTI5 1447 aa25.63■■□□□ 1.69
BCAS2-201ENST00000369541 LAMC3Q9Y6N6 1575 aa25.62■■□□□ 1.69
BCAS2-201ENST00000369541 BAZ1BQ9UIG0 1483 aaKnown RBP25.6■■□□□ 1.69
BCAS2-201ENST00000369541 OSCARQ8IYS5 282 aa25.59■■□□□ 1.69
BCAS2-201ENST00000369541 SMARCA4P51532 1647 aa25.55■■□□□ 1.68
BCAS2-201ENST00000369541 KIF21AQ7Z4S6 1674 aa25.52■■□□□ 1.68
BCAS2-201ENST00000369541 MRC2Q9UBG0 1479 aa25.42■■□□□ 1.66
BCAS2-201ENST00000369541 BAZ1AQ9NRL2 1556 aaPredicted RBP25.4■■□□□ 1.66
BCAS2-201ENST00000369541 CADPSQ9ULU8 1353 aa25.37■■□□□ 1.65
BCAS2-201ENST00000369541 WDR62O43379 1518 aa25.34■■□□□ 1.65
BCAS2-201ENST00000369541 PEG3Q9GZU2 1588 aa25.3■■□□□ 1.64
BCAS2-201ENST00000369541 RIMBP3CA6NJZ7 1639 aa25.15■■□□□ 1.62
BCAS2-201ENST00000369541 RIMBP3BA6NNM3 1639 aa25.15■■□□□ 1.62
BCAS2-201ENST00000369541 RIMBP3Q9UFD9 1639 aa25.15■■□□□ 1.62
BCAS2-201ENST00000369541 TRHP20396 242 aaPredicted RBP25.13■■□□□ 1.61
BCAS2-201ENST00000369541 AEBP2Q6ZN18 517 aaPredicted RBP25.12■■□□□ 1.61
BCAS2-201ENST00000369541 MROH2BQ7Z745 1585 aa25.11■■□□□ 1.61
BCAS2-201ENST00000369541 CEP164Q9UPV0 1460 aa25.11■■□□□ 1.61
BCAS2-201ENST00000369541 CYB5RLQ6IPT4 315 aa25.09■■□□□ 1.61
BCAS2-201ENST00000369541 FANCD2Q9BXW9 1451 aa25.03■■□□□ 1.6
BCAS2-201ENST00000369541 ARHGEF11O15085 1522 aa25.03■■□□□ 1.6
BCAS2-201ENST00000369541 URB2Q14146 1524 aaKnown RBP24.87■■□□□ 1.57
BCAS2-201ENST00000369541 CFTRP13569 1480 aa24.82■■□□□ 1.56
BCAS2-201ENST00000369541 ZNF608Q9ULD9 1512 aaPredicted RBP24.77■■□□□ 1.56
BCAS2-201ENST00000369541 ARAP1Q96P48 1450 aa24.73■■□□□ 1.55
BCAS2-201ENST00000369541 WIZO95785 1651 aa24.68■■□□□ 1.54
BCAS2-201ENST00000369541 IFT140Q96RY7 1462 aa24.67■■□□□ 1.54
BCAS2-201ENST00000369541 FBLN2P98095 1184 aa24.58■■□□□ 1.53
BCAS2-201ENST00000369541 RSF1Q96T23 1441 aaPredicted RBP24.55■■□□□ 1.52
BCAS2-201ENST00000369541 AQRO60306 1485 aaKnown RBP eCLIP24.46■■□□□ 1.511e-6■■□□□ 11.4
BCAS2-201ENST00000369541 EIF4G3O43432 1585 aaKnown RBP24.43■■□□□ 1.5
BCAS2-201ENST00000369541 TOPBP1Q92547 1522 aa24.42■■□□□ 1.5
BCAS2-201ENST00000369541 CHD1O14646 1710 aa24.37■■□□□ 1.49
BCAS2-201ENST00000369541 TOP2AP11388 1531 aaKnown RBP24.3■■□□□ 1.48
BCAS2-201ENST00000369541 ABCC8Q09428 1581 aa24.28■■□□□ 1.48
BCAS2-201ENST00000369541 TARBP1Q13395 1621 aaKnown RBP24.21■■□□□ 1.47
BCAS2-201ENST00000369541 ILDR1Q86SU0 546 aaPredicted RBP24.21■■□□□ 1.47
BCAS2-201ENST00000369541 CHMP7Q8WUX9 453 aaPredicted RBP24.21■■□□□ 1.47
BCAS2-201ENST00000369541 TDRD9Q8NDG6 1382 aaKnown RBP24.19■■□□□ 1.46
BCAS2-201ENST00000369541 CLASP1Q7Z460 1538 aa24.18■■□□□ 1.46
BCAS2-201ENST00000369541 DNMBPQ6XZF7 1577 aa24.17■■□□□ 1.46
BCAS2-201ENST00000369541 CCDC88BA6NC98 1476 aa24.15■■□□□ 1.46
BCAS2-201ENST00000369541 PRDM2Q13029 1718 aa24.14■■□□□ 1.45
BCAS2-201ENST00000369541 POLA1P09884 1462 aaPredicted RBP24.12■■□□□ 1.45
BCAS2-201ENST00000369541 RAD54L2Q9Y4B4 1467 aa24.11■■□□□ 1.45
BCAS2-201ENST00000369541 GAPVD1Q14C86 1478 aa24.1■■□□□ 1.45
BCAS2-201ENST00000369541 SNAPC4Q5SXM2 1469 aa24.1■■□□□ 1.45
BCAS2-201ENST00000369541 SOGA1O94964 1423 aa24.07■■□□□ 1.44
BCAS2-201ENST00000369541 SYNJ1O43426 1573 aa24.06■■□□□ 1.44
BCAS2-201ENST00000369541 MAGI1Q96QZ7 1491 aaPredicted RBP23.97■■□□□ 1.43
BCAS2-201ENST00000369541 SYNJ2O15056 1496 aa23.94■■□□□ 1.42
BCAS2-201ENST00000369541 GRIN2BQ13224 1484 aa23.91■■□□□ 1.42
BCAS2-201ENST00000369541 KDM4FA0A1W2PPD8 638 aa23.89■■□□□ 1.41
BCAS2-201ENST00000369541 FGD5Q6ZNL6 1462 aa23.81■■□□□ 1.4
BCAS2-201ENST00000369541 WDR97A6NE52 1622 aa23.81■■□□□ 1.4
BCAS2-201ENST00000369541 ERCC6L2Q5T890 1561 aa23.79■■□□□ 1.4
BCAS2-201ENST00000369541 FAM69CQ0P6D2 419 aa23.72■■□□□ 1.39
BCAS2-201ENST00000369541 KIF13AQ9H1H9 1805 aa23.63■■□□□ 1.37
BCAS2-201ENST00000369541 CUX1P39880 1505 aa23.63■■□□□ 1.37
BCAS2-201ENST00000369541 CEP170Q5SW79 1584 aa23.62■■□□□ 1.37
BCAS2-201ENST00000369541 GRIN2AQ12879 1464 aa23.58■■□□□ 1.37
BCAS2-201ENST00000369541 ABCC10Q5T3U5 1492 aa23.57■■□□□ 1.36
BCAS2-201ENST00000369541 NUP160Q12769 1436 aa23.56■■□□□ 1.36
BCAS2-201ENST00000369541 NPM1P06748 294 aaKnown RBP eCLIP23.54■■□□□ 1.36
BCAS2-201ENST00000369541 PBRM1Q86U86 1689 aa23.52■■□□□ 1.36
BCAS2-201ENST00000369541 ABCA10Q8WWZ4 1543 aa23.48■■□□□ 1.35
BCAS2-201ENST00000369541 PRG4Q92954 1404 aaPredicted RBP23.47■■□□□ 1.35
BCAS2-201ENST00000369541 KDM6BO15054 1643 aa23.44■■□□□ 1.34
BCAS2-201ENST00000369541 SHROOM2Q13796 1616 aa23.44■■□□□ 1.34
BCAS2-201ENST00000369541 JPH4Q96JJ6 628 aa23.44■■□□□ 1.34
BCAS2-201ENST00000369541 ABCA5Q8WWZ7 1642 aa23.44■■□□□ 1.34
BCAS2-201ENST00000369541 DIP2BQ9P265 1576 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms