RNA–Protein interactions for RNA: ENST00000369217.8

CCNC-202, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-202ENST00000369217 NISCHQ9Y2I1 1504 aa32.88■■■□□ 2.85
CCNC-202ENST00000369217 AEBP2Q6ZN18 517 aaPredicted RBP31.69■■■□□ 2.66
CCNC-202ENST00000369217 CHIC1Q5VXU3 224 aa30.71■■■□□ 2.51
CCNC-202ENST00000369217 ABCC9O60706 1549 aa30.18■■■□□ 2.42
CCNC-202ENST00000369217 CCDC180Q9P1Z9 1646 aa29.67■■■□□ 2.34
CCNC-202ENST00000369217 DNAJC5BQ9UF47 199 aa28.65■■■□□ 2.18
CCNC-202ENST00000369217 RB1CC1Q8TDY2 1594 aa28.6■■■□□ 2.17
CCNC-202ENST00000369217 NACADO15069 1562 aa28.29■■■□□ 2.12
CCNC-202ENST00000369217 DCAF8L2P0C7V8 631 aa28.19■■■□□ 2.1
CCNC-202ENST00000369217 PABPN1Q86U42 306 aaKnown RBP eCLIP28.07■■■□□ 2.08
CCNC-202ENST00000369217 MYO15BQ96JP2 1530 aa27.77■■■□□ 2.04
CCNC-202ENST00000369217 UNC13AQ9UPW8 1703 aa27.55■■■□□ 2
CCNC-202ENST00000369217 BICRAQ9NZM4 1560 aa27.54■■■□□ 2
CCNC-202ENST00000369217 SHROOM4Q9ULL8 1493 aa27.46■■□□□ 1.99
CCNC-202ENST00000369217 CECR2Q9BXF3 1484 aa27.32■■□□□ 1.96
CCNC-202ENST00000369217 SENP3Q9H4L4 574 aaPredicted RBP27.21■■□□□ 1.95
CCNC-202ENST00000369217 DCAF1Q9Y4B6 1507 aa27.2■■□□□ 1.94
CCNC-202ENST00000369217 CC2D2AQ9P2K1 1620 aa27.18■■□□□ 1.94
CCNC-202ENST00000369217 ZCCHC6Q5VYS8 1495 aaKnown RBP27.11■■□□□ 1.93
CCNC-202ENST00000369217 EIF4G1Q04637 1599 aaKnown RBP27.04■■□□□ 1.92
CCNC-202ENST00000369217 SCRIBQ14160 1630 aa26.94■■□□□ 1.9
CCNC-202ENST00000369217 DNAJC5Q9H3Z4 198 aa26.91■■□□□ 1.9
CCNC-202ENST00000369217 PHF23Q9BUL5 403 aaPredicted RBP26.83■■□□□ 1.89
CCNC-202ENST00000369217 CUX2O14529 1486 aa26.35■■□□□ 1.81
CCNC-202ENST00000369217 ERCC6Q03468 1493 aa26.26■■□□□ 1.79
CCNC-202ENST00000369217 NCAPD3P42695 1498 aa26.13■■□□□ 1.77
CCNC-202ENST00000369217 ATAD2BQ9ULI0 1458 aa25.92■■□□□ 1.74
CCNC-202ENST00000369217 SMARCA2P51531 1590 aa25.9■■□□□ 1.74
CCNC-202ENST00000369217 HMGXB3Q12766 1538 aa25.83■■□□□ 1.73
CCNC-202ENST00000369217 BAZ1BQ9UIG0 1483 aaKnown RBP25.71■■□□□ 1.71
CCNC-202ENST00000369217 NESP48681 1621 aa25.69■■□□□ 1.7
CCNC-202ENST00000369217 SMARCA4P51532 1647 aa25.68■■□□□ 1.7
CCNC-202ENST00000369217 BAZ1AQ9NRL2 1556 aaPredicted RBP25.62■■□□□ 1.69
CCNC-202ENST00000369217 PDS5BQ9NTI5 1447 aa25.62■■□□□ 1.69
CCNC-202ENST00000369217 LAMC3Q9Y6N6 1575 aa25.59■■□□□ 1.69
CCNC-202ENST00000369217 TRIM41Q8WV44 630 aa25.53■■□□□ 1.68
CCNC-202ENST00000369217 THOC2Q8NI27 1593 aaKnown RBP25.49■■□□□ 1.67
CCNC-202ENST00000369217 PEG3Q9GZU2 1588 aa25.48■■□□□ 1.67
CCNC-202ENST00000369217 CADPSQ9ULU8 1353 aa25.36■■□□□ 1.65
CCNC-202ENST00000369217 MRC2Q9UBG0 1479 aa25.29■■□□□ 1.64
CCNC-202ENST00000369217 KIF21AQ7Z4S6 1674 aa25.26■■□□□ 1.63
CCNC-202ENST00000369217 MROH2BQ7Z745 1585 aa25.24■■□□□ 1.63
CCNC-202ENST00000369217 OSCARQ8IYS5 282 aa25.19■■□□□ 1.62
CCNC-202ENST00000369217 WDR62O43379 1518 aa25.16■■□□□ 1.62
CCNC-202ENST00000369217 FOXD1Q16676 465 aa25.13■■□□□ 1.61
CCNC-202ENST00000369217 CEP164Q9UPV0 1460 aa25.11■■□□□ 1.61
CCNC-202ENST00000369217 FANCD2Q9BXW9 1451 aa25.01■■□□□ 1.59
CCNC-202ENST00000369217 CFTRP13569 1480 aa24.89■■□□□ 1.58
CCNC-202ENST00000369217 PLPPR3Q6T4P5 718 aa24.86■■□□□ 1.57
CCNC-202ENST00000369217 WIZO95785 1651 aa24.84■■□□□ 1.57
CCNC-202ENST00000369217 URB2Q14146 1524 aaKnown RBP24.71■■□□□ 1.55
CCNC-202ENST00000369217 IFT140Q96RY7 1462 aa24.66■■□□□ 1.54
CCNC-202ENST00000369217 TOP2AP11388 1531 aaKnown RBP24.65■■□□□ 1.54
CCNC-202ENST00000369217 RSF1Q96T23 1441 aaPredicted RBP24.63■■□□□ 1.53
CCNC-202ENST00000369217 RIMBP3CA6NJZ7 1639 aa24.59■■□□□ 1.53
CCNC-202ENST00000369217 RIMBP3BA6NNM3 1639 aa24.59■■□□□ 1.53
CCNC-202ENST00000369217 RIMBP3Q9UFD9 1639 aa24.59■■□□□ 1.53
CCNC-202ENST00000369217 ABCC8Q09428 1581 aa24.56■■□□□ 1.52
CCNC-202ENST00000369217 CYB5RLQ6IPT4 315 aa24.55■■□□□ 1.52
CCNC-202ENST00000369217 ARHGEF11O15085 1522 aa24.55■■□□□ 1.52
CCNC-202ENST00000369217 TRHP20396 242 aaPredicted RBP24.53■■□□□ 1.52
CCNC-202ENST00000369217 ZNF608Q9ULD9 1512 aaPredicted RBP24.48■■□□□ 1.51
CCNC-202ENST00000369217 TOPBP1Q92547 1522 aa24.42■■□□□ 1.5
CCNC-202ENST00000369217 FBLN2P98095 1184 aa24.42■■□□□ 1.5
CCNC-202ENST00000369217 PRDM2Q13029 1718 aa24.38■■□□□ 1.49
CCNC-202ENST00000369217 CCDC88BA6NC98 1476 aa24.37■■□□□ 1.49
CCNC-202ENST00000369217 EIF4G3O43432 1585 aaKnown RBP24.3■■□□□ 1.48
CCNC-202ENST00000369217 DNMBPQ6XZF7 1577 aa24.3■■□□□ 1.48
CCNC-202ENST00000369217 AQRO60306 1485 aaKnown RBP eCLIP24.28■■□□□ 1.48
CCNC-202ENST00000369217 ARAP1Q96P48 1450 aa24.23■■□□□ 1.47
CCNC-202ENST00000369217 CHMP7Q8WUX9 453 aaPredicted RBP24.2■■□□□ 1.46
CCNC-202ENST00000369217 SOGA1O94964 1423 aa24.15■■□□□ 1.46
CCNC-202ENST00000369217 POLA1P09884 1462 aaPredicted RBP24.14■■□□□ 1.46
CCNC-202ENST00000369217 TARBP1Q13395 1621 aaKnown RBP24.14■■□□□ 1.46
CCNC-202ENST00000369217 CHD1O14646 1710 aa24.13■■□□□ 1.45
CCNC-202ENST00000369217 TDRD9Q8NDG6 1382 aaKnown RBP24.1■■□□□ 1.45
CCNC-202ENST00000369217 WDR97A6NE52 1622 aa24.06■■□□□ 1.44
CCNC-202ENST00000369217 SYNJ1O43426 1573 aa24.04■■□□□ 1.44
CCNC-202ENST00000369217 MAGI1Q96QZ7 1491 aaPredicted RBP24.03■■□□□ 1.44
CCNC-202ENST00000369217 SNAPC4Q5SXM2 1469 aa24.02■■□□□ 1.44
CCNC-202ENST00000369217 RAD54L2Q9Y4B4 1467 aa24.02■■□□□ 1.44
CCNC-202ENST00000369217 GRIN2BQ13224 1484 aa23.99■■□□□ 1.43
CCNC-202ENST00000369217 CLASP1Q7Z460 1538 aa23.94■■□□□ 1.42
CCNC-202ENST00000369217 SYNJ2O15056 1496 aa23.94■■□□□ 1.42
CCNC-202ENST00000369217 FGD5Q6ZNL6 1462 aa23.92■■□□□ 1.42
CCNC-202ENST00000369217 GAPVD1Q14C86 1478 aa23.86■■□□□ 1.41
CCNC-202ENST00000369217 ADRA2BP18089 450 aa23.78■■□□□ 1.4
CCNC-202ENST00000369217 PPP6R1Q9UPN7 881 aa23.78■■□□□ 1.4
CCNC-202ENST00000369217 CUX1P39880 1505 aa23.74■■□□□ 1.39
CCNC-202ENST00000369217 PIAS4Q8N2W9 510 aaPredicted RBP23.69■■□□□ 1.38
CCNC-202ENST00000369217 ABCA10Q8WWZ4 1543 aa23.67■■□□□ 1.38
CCNC-202ENST00000369217 GRIN2AQ12879 1464 aa23.61■■□□□ 1.37
CCNC-202ENST00000369217 PBRM1Q86U86 1689 aa23.6■■□□□ 1.37
CCNC-202ENST00000369217 WRNQ14191 1432 aaPredicted RBP eCLIP23.6■■□□□ 1.37
CCNC-202ENST00000369217 NPM1P06748 294 aaKnown RBP eCLIP23.58■■□□□ 1.37
CCNC-202ENST00000369217 MSH5O43196 834 aa23.55■■□□□ 1.36
CCNC-202ENST00000369217 NUP160Q12769 1436 aa23.54■■□□□ 1.36
CCNC-202ENST00000369217 ABCA5Q8WWZ7 1642 aa23.54■■□□□ 1.36
CCNC-202ENST00000369217 FHAD1B1AJZ9 1412 aa23.53■■□□□ 1.36
CCNC-202ENST00000369217 CEP170Q5SW79 1584 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 249.9 ms