RNA–Protein interactions for RNA: ENST00000368902.1

SCNM1-201, Transcript of sodium channel modifier 1, humanhuman

TSL 2 BASIC

Gene SCNM1, Length 869 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-201ENST00000368902 NISCHQ9Y2I1 1504 aa21.55■■□□□ 1.04
SCNM1-201ENST00000368902 ABCC9O60706 1549 aa19.64■□□□□ 0.73
SCNM1-201ENST00000368902 CCDC180Q9P1Z9 1646 aa19.49■□□□□ 0.71
SCNM1-201ENST00000368902 RB1CC1Q8TDY2 1594 aa18.63■□□□□ 0.57
SCNM1-201ENST00000368902 DNAJC5BQ9UF47 199 aa18.48■□□□□ 0.55
SCNM1-201ENST00000368902 NACADO15069 1562 aa18.43■□□□□ 0.54
SCNM1-201ENST00000368902 UNC13AQ9UPW8 1703 aa18.18■□□□□ 0.5
SCNM1-201ENST00000368902 PABPN1Q86U42 306 aaKnown RBP eCLIP18.17■□□□□ 0.5
SCNM1-201ENST00000368902 DCAF8L2P0C7V8 631 aa18.15■□□□□ 0.5
SCNM1-201ENST00000368902 MYO15BQ96JP2 1530 aa18.11■□□□□ 0.49
SCNM1-201ENST00000368902 BICRAQ9NZM4 1560 aa18.07■□□□□ 0.48
SCNM1-201ENST00000368902 AEBP2Q6ZN18 517 aaPredicted RBP17.88■□□□□ 0.45
SCNM1-201ENST00000368902 SHROOM4Q9ULL8 1493 aa17.88■□□□□ 0.45
SCNM1-201ENST00000368902 ZCCHC6Q5VYS8 1495 aaKnown RBP17.87■□□□□ 0.45
SCNM1-201ENST00000368902 DCAF1Q9Y4B6 1507 aa17.8■□□□□ 0.44
SCNM1-201ENST00000368902 SCRIBQ14160 1630 aa17.74■□□□□ 0.43
SCNM1-201ENST00000368902 CC2D2AQ9P2K1 1620 aa17.74■□□□□ 0.43
SCNM1-201ENST00000368902 CECR2Q9BXF3 1484 aa17.72■□□□□ 0.43
SCNM1-201ENST00000368902 EIF4G1Q04637 1599 aaKnown RBP17.67■□□□□ 0.42
SCNM1-201ENST00000368902 DNAJC5Q9H3Z4 198 aa17.13■□□□□ 0.33
SCNM1-201ENST00000368902 CUX2O14529 1486 aa17.04■□□□□ 0.32
SCNM1-201ENST00000368902 ERCC6Q03468 1493 aa17■□□□□ 0.31
SCNM1-201ENST00000368902 CHIC1Q5VXU3 224 aa16.98■□□□□ 0.31
SCNM1-201ENST00000368902 NCAPD3P42695 1498 aa16.98■□□□□ 0.31
SCNM1-201ENST00000368902 HMGXB3Q12766 1538 aa16.92■□□□□ 0.3
SCNM1-201ENST00000368902 ATAD2BQ9ULI0 1458 aa16.92■□□□□ 0.3
SCNM1-201ENST00000368902 SMARCA2P51531 1590 aa16.89■□□□□ 0.3
SCNM1-201ENST00000368902 SMARCA4P51532 1647 aa16.89■□□□□ 0.29
SCNM1-201ENST00000368902 NESP48681 1621 aa16.8■□□□□ 0.28
SCNM1-201ENST00000368902 BAZ1BQ9UIG0 1483 aaKnown RBP16.78■□□□□ 0.28
SCNM1-201ENST00000368902 BAZ1AQ9NRL2 1556 aaPredicted RBP16.77■□□□□ 0.28
SCNM1-201ENST00000368902 THOC2Q8NI27 1593 aaKnown RBP16.75■□□□□ 0.27
SCNM1-201ENST00000368902 PEG3Q9GZU2 1588 aa16.72■□□□□ 0.27
SCNM1-201ENST00000368902 LAMC3Q9Y6N6 1575 aa16.68■□□□□ 0.26
SCNM1-201ENST00000368902 KIF21AQ7Z4S6 1674 aa16.62■□□□□ 0.25
SCNM1-201ENST00000368902 MROH2BQ7Z745 1585 aa16.6■□□□□ 0.25
SCNM1-201ENST00000368902 PDS5BQ9NTI5 1447 aa16.55■□□□□ 0.24
SCNM1-201ENST00000368902 MRC2Q9UBG0 1479 aa16.48■□□□□ 0.23
SCNM1-201ENST00000368902 WDR62O43379 1518 aa16.45■□□□□ 0.22
SCNM1-201ENST00000368902 CADPSQ9ULU8 1353 aa16.44■□□□□ 0.22
SCNM1-201ENST00000368902 WIZO95785 1651 aa16.39■□□□□ 0.21
SCNM1-201ENST00000368902 CEP164Q9UPV0 1460 aa16.37■□□□□ 0.21
SCNM1-201ENST00000368902 TRIM41Q8WV44 630 aa16.34■□□□□ 0.21
SCNM1-201ENST00000368902 FANCD2Q9BXW9 1451 aa16.3■□□□□ 0.2
SCNM1-201ENST00000368902 CFTRP13569 1480 aa16.24■□□□□ 0.19
SCNM1-201ENST00000368902 TOP2AP11388 1531 aaKnown RBP16.22■□□□□ 0.19
SCNM1-201ENST00000368902 URB2Q14146 1524 aaKnown RBP16.19■□□□□ 0.18
SCNM1-201ENST00000368902 RSF1Q96T23 1441 aaPredicted RBP16.17■□□□□ 0.18
SCNM1-201ENST00000368902 PRDM2Q13029 1718 aa16.12■□□□□ 0.17
SCNM1-201ENST00000368902 OSCARQ8IYS5 282 aa16.1■□□□□ 0.17
SCNM1-201ENST00000368902 RIMBP3CA6NJZ7 1639 aa16.03■□□□□ 0.16
SCNM1-201ENST00000368902 RIMBP3BA6NNM3 1639 aa16.03■□□□□ 0.16
SCNM1-201ENST00000368902 RIMBP3Q9UFD9 1639 aa16.03■□□□□ 0.16
SCNM1-201ENST00000368902 IFT140Q96RY7 1462 aa16.03■□□□□ 0.16
SCNM1-201ENST00000368902 ZNF608Q9ULD9 1512 aaPredicted RBP16.01■□□□□ 0.15
SCNM1-201ENST00000368902 EIF4G3O43432 1585 aaKnown RBP15.98■□□□□ 0.15
SCNM1-201ENST00000368902 TOPBP1Q92547 1522 aa15.98■□□□□ 0.15
SCNM1-201ENST00000368902 ARHGEF11O15085 1522 aa15.97■□□□□ 0.15
SCNM1-201ENST00000368902 CCDC88BA6NC98 1476 aa15.96■□□□□ 0.14
SCNM1-201ENST00000368902 DNMBPQ6XZF7 1577 aa15.92■□□□□ 0.14
SCNM1-201ENST00000368902 ABCC8Q09428 1581 aa15.9■□□□□ 0.14
SCNM1-201ENST00000368902 CHD1O14646 1710 aa15.87■□□□□ 0.13
SCNM1-201ENST00000368902 TARBP1Q13395 1621 aaKnown RBP15.85■□□□□ 0.13
SCNM1-201ENST00000368902 SUPT5HO00267 1087 aaKnown RBP15.81■□□□□ 0.12
SCNM1-201ENST00000368902 POLA1P09884 1462 aaPredicted RBP15.81■□□□□ 0.12
SCNM1-201ENST00000368902 AQRO60306 1485 aaKnown RBP eCLIP15.8■□□□□ 0.12
SCNM1-201ENST00000368902 ARAP1Q96P48 1450 aa15.79■□□□□ 0.12
SCNM1-201ENST00000368902 CYB5RLQ6IPT4 315 aa15.74■□□□□ 0.11
SCNM1-201ENST00000368902 WDR97A6NE52 1622 aa15.72■□□□□ 0.11
SCNM1-201ENST00000368902 RAD54L2Q9Y4B4 1467 aa15.71■□□□□ 0.11
SCNM1-201ENST00000368902 FBLN2P98095 1184 aa15.71■□□□□ 0.11
SCNM1-201ENST00000368902 SNAPC4Q5SXM2 1469 aa15.71■□□□□ 0.1
SCNM1-201ENST00000368902 CLASP1Q7Z460 1538 aa15.68■□□□□ 0.1
SCNM1-201ENST00000368902 FGD5Q6ZNL6 1462 aa15.68■□□□□ 0.1
SCNM1-201ENST00000368902 TDRD9Q8NDG6 1382 aaKnown RBP15.66■□□□□ 0.1
SCNM1-201ENST00000368902 SOGA1O94964 1423 aa15.66■□□□□ 0.1
SCNM1-201ENST00000368902 SYNJ1O43426 1573 aa15.66■□□□□ 0.1
SCNM1-201ENST00000368902 TRHP20396 242 aaPredicted RBP15.65■□□□□ 0.1
SCNM1-201ENST00000368902 MAGI1Q96QZ7 1491 aaPredicted RBP15.65■□□□□ 0.1
SCNM1-201ENST00000368902 CUX1P39880 1505 aa15.63■□□□□ 0.09
SCNM1-201ENST00000368902 GRIN2BQ13224 1484 aa15.6■□□□□ 0.09
SCNM1-201ENST00000368902 SYNJ2O15056 1496 aa15.59■□□□□ 0.09
SCNM1-201ENST00000368902 PBRM1Q86U86 1689 aa15.57■□□□□ 0.08
SCNM1-201ENST00000368902 CHMP7Q8WUX9 453 aaPredicted RBP15.55■□□□□ 0.08
SCNM1-201ENST00000368902 ABCA5Q8WWZ7 1642 aa15.52■□□□□ 0.08
SCNM1-201ENST00000368902 GAPVD1Q14C86 1478 aa15.51■□□□□ 0.07
SCNM1-201ENST00000368902 ABCA10Q8WWZ4 1543 aa15.48■□□□□ 0.07
SCNM1-201ENST00000368902 ADAMTS12P58397 1594 aa15.45■□□□□ 0.06
SCNM1-201ENST00000368902 GRIN2AQ12879 1464 aa15.42■□□□□ 0.06
SCNM1-201ENST00000368902 ERCC6L2Q5T890 1561 aa15.4■□□□□ 0.06
SCNM1-201ENST00000368902 CEP170Q5SW79 1584 aa15.39■□□□□ 0.05
SCNM1-201ENST00000368902 NUP160Q12769 1436 aa15.37■□□□□ 0.05
SCNM1-201ENST00000368902 WRNQ14191 1432 aaPredicted RBP eCLIP15.35■□□□□ 0.05
SCNM1-201ENST00000368902 SHROOM2Q13796 1616 aa15.35■□□□□ 0.05
SCNM1-201ENST00000368902 BIVM-ERCC5R4GMW8 1640 aa15.34■□□□□ 0.05
SCNM1-201ENST00000368902 TOP2BQ02880 1626 aa15.33■□□□□ 0.04
SCNM1-201ENST00000368902 FHAD1B1AJZ9 1412 aa15.31■□□□□ 0.04
SCNM1-201ENST00000368902 ERICH3Q5RHP9 1530 aa15.29■□□□□ 0.04
SCNM1-201ENST00000368902 SENP3Q9H4L4 574 aaPredicted RBP15.24■□□□□ 0.03
SCNM1-201ENST00000368902 RUSC2Q8N2Y8 1516 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms