RNA–Protein interactions for RNA: ENST00000367982.8

NR1I3-204, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NR1I3, Length 1,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-204ENST00000367982 NISCHQ9Y2I1 1504 aa21.18■□□□□ 0.98
NR1I3-204ENST00000367982 AEBP2Q6ZN18 517 aaPredicted RBP21.08■□□□□ 0.97
NR1I3-204ENST00000367982 CHIC1Q5VXU3 224 aa20.87■□□□□ 0.93
NR1I3-204ENST00000367982 CCDC180Q9P1Z9 1646 aa18.98■□□□□ 0.63
NR1I3-204ENST00000367982 ABCC9O60706 1549 aa18.88■□□□□ 0.61
NR1I3-204ENST00000367982 PHF23Q9BUL5 403 aaPredicted RBP18.33■□□□□ 0.53
NR1I3-204ENST00000367982 RB1CC1Q8TDY2 1594 aa18.04■□□□□ 0.48
NR1I3-204ENST00000367982 SENP3Q9H4L4 574 aaPredicted RBP17.97■□□□□ 0.47
NR1I3-204ENST00000367982 NACADO15069 1562 aa17.95■□□□□ 0.46
NR1I3-204ENST00000367982 MYO15BQ96JP2 1530 aa17.78■□□□□ 0.44
NR1I3-204ENST00000367982 DCAF8L2P0C7V8 631 aa17.76■□□□□ 0.43
NR1I3-204ENST00000367982 DNAJC5BQ9UF47 199 aa17.71■□□□□ 0.42
NR1I3-204ENST00000367982 PABPN1Q86U42 306 aaKnown RBP eCLIP17.59■□□□□ 0.41
NR1I3-204ENST00000367982 UNC13AQ9UPW8 1703 aa17.58■□□□□ 0.41
NR1I3-204ENST00000367982 ZCCHC6Q5VYS8 1495 aaKnown RBP17.56■□□□□ 0.4
NR1I3-204ENST00000367982 DCAF1Q9Y4B6 1507 aa17.55■□□□□ 0.4
NR1I3-204ENST00000367982 BICRAQ9NZM4 1560 aa17.52■□□□□ 0.4
NR1I3-204ENST00000367982 SHROOM4Q9ULL8 1493 aa17.35■□□□□ 0.37
NR1I3-204ENST00000367982 SCRIBQ14160 1630 aa17.23■□□□□ 0.35
NR1I3-204ENST00000367982 PLPPR3Q6T4P5 718 aa17.12■□□□□ 0.33
NR1I3-204ENST00000367982 EIF4G1Q04637 1599 aaKnown RBP17.08■□□□□ 0.33
NR1I3-204ENST00000367982 CC2D2AQ9P2K1 1620 aa17.08■□□□□ 0.32
NR1I3-204ENST00000367982 CECR2Q9BXF3 1484 aa17.04■□□□□ 0.32
NR1I3-204ENST00000367982 NCAPD3P42695 1498 aa16.59■□□□□ 0.25
NR1I3-204ENST00000367982 FOXD1Q16676 465 aa16.59■□□□□ 0.25
NR1I3-204ENST00000367982 ATAD2BQ9ULI0 1458 aa16.52■□□□□ 0.24
NR1I3-204ENST00000367982 SMARCA4P51532 1647 aa16.49■□□□□ 0.23
NR1I3-204ENST00000367982 SMARCA2P51531 1590 aa16.47■□□□□ 0.23
NR1I3-204ENST00000367982 HMGXB3Q12766 1538 aa16.45■□□□□ 0.22
NR1I3-204ENST00000367982 BAZ1AQ9NRL2 1556 aaPredicted RBP16.44■□□□□ 0.22
NR1I3-204ENST00000367982 PEG3Q9GZU2 1588 aa16.39■□□□□ 0.21
NR1I3-204ENST00000367982 BAZ1BQ9UIG0 1483 aaKnown RBP16.34■□□□□ 0.21
NR1I3-204ENST00000367982 CUX2O14529 1486 aa16.32■□□□□ 0.2
NR1I3-204ENST00000367982 ERCC6Q03468 1493 aa16.3■□□□□ 0.2
NR1I3-204ENST00000367982 MROH2BQ7Z745 1585 aa16.29■□□□□ 0.2
NR1I3-204ENST00000367982 DNAJC5Q9H3Z4 198 aa16.26■□□□□ 0.19
NR1I3-204ENST00000367982 NESP48681 1621 aa16.24■□□□□ 0.19
NR1I3-204ENST00000367982 LAMC3Q9Y6N6 1575 aa16.18■□□□□ 0.18
NR1I3-204ENST00000367982 ADRA2BP18089 450 aa16.18■□□□□ 0.18
NR1I3-204ENST00000367982 PPP6R1Q9UPN7 881 aa16.12■□□□□ 0.17
NR1I3-204ENST00000367982 PDS5BQ9NTI5 1447 aa16.09■□□□□ 0.17
NR1I3-204ENST00000367982 THOC2Q8NI27 1593 aaKnown RBP16.09■□□□□ 0.17
NR1I3-204ENST00000367982 WIZO95785 1651 aa16.07■□□□□ 0.16
NR1I3-204ENST00000367982 CADPSQ9ULU8 1353 aa16.07■□□□□ 0.16
NR1I3-204ENST00000367982 KIF21AQ7Z4S6 1674 aa16.02■□□□□ 0.15
NR1I3-204ENST00000367982 RSF1Q96T23 1441 aaPredicted RBP16.01■□□□□ 0.15
NR1I3-204ENST00000367982 MRC2Q9UBG0 1479 aa15.93■□□□□ 0.14
NR1I3-204ENST00000367982 TOP2AP11388 1531 aaKnown RBP15.91■□□□□ 0.14
NR1I3-204ENST00000367982 CFTRP13569 1480 aa15.9■□□□□ 0.14
NR1I3-204ENST00000367982 WDR62O43379 1518 aa15.9■□□□□ 0.14
NR1I3-204ENST00000367982 CEP164Q9UPV0 1460 aa15.87■□□□□ 0.13
NR1I3-204ENST00000367982 FANCD2Q9BXW9 1451 aa15.85■□□□□ 0.13
NR1I3-204ENST00000367982 PIAS4Q8N2W9 510 aaPredicted RBP15.8■□□□□ 0.12
NR1I3-204ENST00000367982 CCDC88BA6NC98 1476 aa15.73■□□□□ 0.11
NR1I3-204ENST00000367982 URB2Q14146 1524 aaKnown RBP15.72■□□□□ 0.11
NR1I3-204ENST00000367982 PRDM2Q13029 1718 aa15.68■□□□□ 0.1
NR1I3-204ENST00000367982 ABCC8Q09428 1581 aa15.57■□□□□ 0.08
NR1I3-204ENST00000367982 IFT140Q96RY7 1462 aa15.57■□□□□ 0.08
NR1I3-204ENST00000367982 OSCARQ8IYS5 282 aa15.57■□□□□ 0.08
NR1I3-204ENST00000367982 TOPBP1Q92547 1522 aa15.56■□□□□ 0.08
NR1I3-204ENST00000367982 ZNF608Q9ULD9 1512 aaPredicted RBP15.51■□□□□ 0.07
NR1I3-204ENST00000367982 DNMBPQ6XZF7 1577 aa15.51■□□□□ 0.07
NR1I3-204ENST00000367982 TRIM41Q8WV44 630 aa15.46■□□□□ 0.07
NR1I3-204ENST00000367982 TARBP1Q13395 1621 aaKnown RBP15.44■□□□□ 0.06
NR1I3-204ENST00000367982 EIF4G3O43432 1585 aaKnown RBP15.42■□□□□ 0.06
NR1I3-204ENST00000367982 POLA1P09884 1462 aaPredicted RBP15.41■□□□□ 0.06
NR1I3-204ENST00000367982 AQRO60306 1485 aaKnown RBP eCLIP15.38■□□□□ 0.05
NR1I3-204ENST00000367982 SOGA1O94964 1423 aa15.34■□□□□ 0.05
NR1I3-204ENST00000367982 RAD54L2Q9Y4B4 1467 aa15.33■□□□□ 0.04
NR1I3-204ENST00000367982 RIMBP3CA6NJZ7 1639 aa15.32■□□□□ 0.04
NR1I3-204ENST00000367982 RIMBP3BA6NNM3 1639 aa15.32■□□□□ 0.04
NR1I3-204ENST00000367982 RIMBP3Q9UFD9 1639 aa15.32■□□□□ 0.04
NR1I3-204ENST00000367982 WDR97A6NE52 1622 aa15.31■□□□□ 0.04
NR1I3-204ENST00000367982 CUX1P39880 1505 aa15.31■□□□□ 0.04
NR1I3-204ENST00000367982 FGD5Q6ZNL6 1462 aa15.3■□□□□ 0.04
NR1I3-204ENST00000367982 ARHGEF11O15085 1522 aa15.29■□□□□ 0.04
NR1I3-204ENST00000367982 TDRD9Q8NDG6 1382 aaKnown RBP15.28■□□□□ 0.04
NR1I3-204ENST00000367982 MSH5O43196 834 aa15.28■□□□□ 0.04
NR1I3-204ENST00000367982 CHD1O14646 1710 aa15.26■□□□□ 0.03
NR1I3-204ENST00000367982 SUPT5HO00267 1087 aaKnown RBP15.24■□□□□ 0.03
NR1I3-204ENST00000367982 FBLN2P98095 1184 aa15.22■□□□□ 0.03
NR1I3-204ENST00000367982 SNAPC4Q5SXM2 1469 aa15.21■□□□□ 0.03
NR1I3-204ENST00000367982 MAGI1Q96QZ7 1491 aaPredicted RBP15.21■□□□□ 0.03
NR1I3-204ENST00000367982 GRIN2BQ13224 1484 aa15.21■□□□□ 0.02
NR1I3-204ENST00000367982 CYB5RLQ6IPT4 315 aa15.17■□□□□ 0.02
NR1I3-204ENST00000367982 CHMP7Q8WUX9 453 aaPredicted RBP15.17■□□□□ 0.02
NR1I3-204ENST00000367982 ABCA10Q8WWZ4 1543 aa15.17■□□□□ 0.02
NR1I3-204ENST00000367982 SYNJ2O15056 1496 aa15.16■□□□□ 0.02
NR1I3-204ENST00000367982 GAPVD1Q14C86 1478 aa15.16■□□□□ 0.02
NR1I3-204ENST00000367982 CLASP1Q7Z460 1538 aa15.15■□□□□ 0.02
NR1I3-204ENST00000367982 ARAP1Q96P48 1450 aa15.14■□□□□ 0.01
NR1I3-204ENST00000367982 SYNJ1O43426 1573 aa15.13■□□□□ 0.01
NR1I3-204ENST00000367982 ABCA5Q8WWZ7 1642 aa15.12■□□□□ 0.01
NR1I3-204ENST00000367982 WRNQ14191 1432 aaPredicted RBP eCLIP15.11■□□□□ 0.01
NR1I3-204ENST00000367982 PPP4R3CPQ6ZMV5 832 aa15.11■□□□□ 0.01
NR1I3-204ENST00000367982 PBRM1Q86U86 1689 aa15.1■□□□□ 0.01
NR1I3-204ENST00000367982 TOP2BQ02880 1626 aa15.09■□□□□ 0.01
NR1I3-204ENST00000367982 BIVM-ERCC5R4GMW8 1640 aa15.08■□□□□ 0
NR1I3-204ENST00000367982 GRIN2AQ12879 1464 aa15.01□□□□□ -0.01
NR1I3-204ENST00000367982 ADAMTS12P58397 1594 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms