RNA–Protein interactions for RNA: ENST00000367563.7

LINC00272-201, long intergenic non-protein coding RNA 272, humanhuman

TSL 1 (best) BASIC

Gene LINC00272, Length 740 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00272-201ENST00000367563 AEBP2Q6ZN18 517 aaPredicted RBP22.83■■□□□ 1.25
LINC00272-201ENST00000367563 CHIC1Q5VXU3 224 aa22.49■■□□□ 1.19
LINC00272-201ENST00000367563 NISCHQ9Y2I1 1504 aa21.94■■□□□ 1.1
LINC00272-201ENST00000367563 ABCC9O60706 1549 aa20.13■□□□□ 0.81
LINC00272-201ENST00000367563 PHF23Q9BUL5 403 aaPredicted RBP19.74■□□□□ 0.75
LINC00272-201ENST00000367563 CCDC180Q9P1Z9 1646 aa19.7■□□□□ 0.74
LINC00272-201ENST00000367563 SENP3Q9H4L4 574 aaPredicted RBP19.45■□□□□ 0.7
LINC00272-201ENST00000367563 DNAJC5BQ9UF47 199 aa19.2■□□□□ 0.66
LINC00272-201ENST00000367563 RB1CC1Q8TDY2 1594 aa18.93■□□□□ 0.62
LINC00272-201ENST00000367563 PABPN1Q86U42 306 aaKnown RBP eCLIP18.75■□□□□ 0.59
LINC00272-201ENST00000367563 NACADO15069 1562 aa18.73■□□□□ 0.59
LINC00272-201ENST00000367563 DCAF8L2P0C7V8 631 aa18.73■□□□□ 0.59
LINC00272-201ENST00000367563 UNC13AQ9UPW8 1703 aa18.46■□□□□ 0.55
LINC00272-201ENST00000367563 BICRAQ9NZM4 1560 aa18.45■□□□□ 0.54
LINC00272-201ENST00000367563 PLPPR3Q6T4P5 718 aa18.36■□□□□ 0.53
LINC00272-201ENST00000367563 MYO15BQ96JP2 1530 aa18.36■□□□□ 0.53
LINC00272-201ENST00000367563 CECR2Q9BXF3 1484 aa18.14■□□□□ 0.49
LINC00272-201ENST00000367563 ZCCHC6Q5VYS8 1495 aaKnown RBP18.12■□□□□ 0.49
LINC00272-201ENST00000367563 CC2D2AQ9P2K1 1620 aa18.11■□□□□ 0.49
LINC00272-201ENST00000367563 SHROOM4Q9ULL8 1493 aa18.07■□□□□ 0.48
LINC00272-201ENST00000367563 SCRIBQ14160 1630 aa18.05■□□□□ 0.48
LINC00272-201ENST00000367563 DCAF1Q9Y4B6 1507 aa18.04■□□□□ 0.48
LINC00272-201ENST00000367563 EIF4G1Q04637 1599 aaKnown RBP18■□□□□ 0.47
LINC00272-201ENST00000367563 FOXD1Q16676 465 aa17.96■□□□□ 0.47
LINC00272-201ENST00000367563 DNAJC5Q9H3Z4 198 aa17.75■□□□□ 0.43
LINC00272-201ENST00000367563 CUX2O14529 1486 aa17.37■□□□□ 0.37
LINC00272-201ENST00000367563 ADRA2BP18089 450 aa17.36■□□□□ 0.37
LINC00272-201ENST00000367563 PPP6R1Q9UPN7 881 aa17.36■□□□□ 0.37
LINC00272-201ENST00000367563 NCAPD3P42695 1498 aa17.35■□□□□ 0.37
LINC00272-201ENST00000367563 ERCC6Q03468 1493 aa17.35■□□□□ 0.37
LINC00272-201ENST00000367563 ATAD2BQ9ULI0 1458 aa17.28■□□□□ 0.36
LINC00272-201ENST00000367563 NESP48681 1621 aa17.23■□□□□ 0.35
LINC00272-201ENST00000367563 SMARCA4P51532 1647 aa17.15■□□□□ 0.34
LINC00272-201ENST00000367563 HMGXB3Q12766 1538 aa17.15■□□□□ 0.34
LINC00272-201ENST00000367563 SMARCA2P51531 1590 aa17.15■□□□□ 0.34
LINC00272-201ENST00000367563 BAZ1BQ9UIG0 1483 aaKnown RBP17.07■□□□□ 0.32
LINC00272-201ENST00000367563 THOC2Q8NI27 1593 aaKnown RBP17.02■□□□□ 0.32
LINC00272-201ENST00000367563 BAZ1AQ9NRL2 1556 aaPredicted RBP17.01■□□□□ 0.31
LINC00272-201ENST00000367563 PIAS4Q8N2W9 510 aaPredicted RBP17■□□□□ 0.31
LINC00272-201ENST00000367563 PEG3Q9GZU2 1588 aa16.96■□□□□ 0.31
LINC00272-201ENST00000367563 MROH2BQ7Z745 1585 aa16.94■□□□□ 0.3
LINC00272-201ENST00000367563 LAMC3Q9Y6N6 1575 aa16.94■□□□□ 0.3
LINC00272-201ENST00000367563 TRIM41Q8WV44 630 aa16.9■□□□□ 0.3
LINC00272-201ENST00000367563 PDS5BQ9NTI5 1447 aa16.89■□□□□ 0.29
LINC00272-201ENST00000367563 KIF21AQ7Z4S6 1674 aa16.89■□□□□ 0.29
LINC00272-201ENST00000367563 CADPSQ9ULU8 1353 aa16.82■□□□□ 0.28
LINC00272-201ENST00000367563 MRC2Q9UBG0 1479 aa16.78■□□□□ 0.28
LINC00272-201ENST00000367563 WDR62O43379 1518 aa16.74■□□□□ 0.27
LINC00272-201ENST00000367563 WIZO95785 1651 aa16.69■□□□□ 0.26
LINC00272-201ENST00000367563 CEP164Q9UPV0 1460 aa16.65■□□□□ 0.26
LINC00272-201ENST00000367563 FANCD2Q9BXW9 1451 aa16.63■□□□□ 0.25
LINC00272-201ENST00000367563 MSH5O43196 834 aa16.6■□□□□ 0.25
LINC00272-201ENST00000367563 OSCARQ8IYS5 282 aa16.59■□□□□ 0.25
LINC00272-201ENST00000367563 CFTRP13569 1480 aa16.56■□□□□ 0.24
LINC00272-201ENST00000367563 URB2Q14146 1524 aaKnown RBP16.54■□□□□ 0.24
LINC00272-201ENST00000367563 RSF1Q96T23 1441 aaPredicted RBP16.49■□□□□ 0.23
LINC00272-201ENST00000367563 TOP2AP11388 1531 aaKnown RBP16.45■□□□□ 0.22
LINC00272-201ENST00000367563 ZNF608Q9ULD9 1512 aaPredicted RBP16.4■□□□□ 0.22
LINC00272-201ENST00000367563 RIMBP3CA6NJZ7 1639 aa16.37■□□□□ 0.21
LINC00272-201ENST00000367563 RIMBP3BA6NNM3 1639 aa16.37■□□□□ 0.21
LINC00272-201ENST00000367563 RIMBP3Q9UFD9 1639 aa16.37■□□□□ 0.21
LINC00272-201ENST00000367563 IFT140Q96RY7 1462 aa16.33■□□□□ 0.2
LINC00272-201ENST00000367563 ARHGEF11O15085 1522 aa16.31■□□□□ 0.2
LINC00272-201ENST00000367563 CCDC88BA6NC98 1476 aa16.31■□□□□ 0.2
LINC00272-201ENST00000367563 TOPBP1Q92547 1522 aa16.29■□□□□ 0.2
LINC00272-201ENST00000367563 CYB5RLQ6IPT4 315 aa16.26■□□□□ 0.19
LINC00272-201ENST00000367563 EIF4G3O43432 1585 aaKnown RBP16.22■□□□□ 0.19
LINC00272-201ENST00000367563 PRDM2Q13029 1718 aa16.22■□□□□ 0.19
LINC00272-201ENST00000367563 AQRO60306 1485 aaKnown RBP eCLIP16.22■□□□□ 0.19
LINC00272-201ENST00000367563 FBLN2P98095 1184 aa16.17■□□□□ 0.18
LINC00272-201ENST00000367563 DNMBPQ6XZF7 1577 aa16.17■□□□□ 0.18
LINC00272-201ENST00000367563 TRHP20396 242 aaPredicted RBP16.16■□□□□ 0.18
LINC00272-201ENST00000367563 PPP4R3CPQ6ZMV5 832 aa16.16■□□□□ 0.18
LINC00272-201ENST00000367563 ARAP1Q96P48 1450 aa16.16■□□□□ 0.18
LINC00272-201ENST00000367563 ABCC8Q09428 1581 aa16.15■□□□□ 0.18
LINC00272-201ENST00000367563 TARBP1Q13395 1621 aaKnown RBP16.13■□□□□ 0.17
LINC00272-201ENST00000367563 CHD1O14646 1710 aa16.11■□□□□ 0.17
LINC00272-201ENST00000367563 POLA1P09884 1462 aaPredicted RBP16.1■□□□□ 0.17
LINC00272-201ENST00000367563 RAD54L2Q9Y4B4 1467 aa16.1■□□□□ 0.17
LINC00272-201ENST00000367563 TDRD9Q8NDG6 1382 aaKnown RBP16.09■□□□□ 0.17
LINC00272-201ENST00000367563 SOGA1O94964 1423 aa16.04■□□□□ 0.16
LINC00272-201ENST00000367563 SNAPC4Q5SXM2 1469 aa16.01■□□□□ 0.15
LINC00272-201ENST00000367563 SCAF1Q9H7N4 1312 aaKnown RBP16■□□□□ 0.15
LINC00272-201ENST00000367563 CLASP1Q7Z460 1538 aa15.98■□□□□ 0.15
LINC00272-201ENST00000367563 FGD5Q6ZNL6 1462 aa15.97■□□□□ 0.15
LINC00272-201ENST00000367563 CHMP7Q8WUX9 453 aaPredicted RBP15.97■□□□□ 0.15
LINC00272-201ENST00000367563 CUX1P39880 1505 aa15.92■□□□□ 0.14
LINC00272-201ENST00000367563 GRIN2BQ13224 1484 aa15.91■□□□□ 0.14
LINC00272-201ENST00000367563 MAGI1Q96QZ7 1491 aaPredicted RBP15.91■□□□□ 0.14
LINC00272-201ENST00000367563 KCNA4P22459 653 aa15.9■□□□□ 0.14
LINC00272-201ENST00000367563 SYNJ1O43426 1573 aa15.9■□□□□ 0.14
LINC00272-201ENST00000367563 SYNJ2O15056 1496 aa15.88■□□□□ 0.13
LINC00272-201ENST00000367563 WDR97A6NE52 1622 aa15.86■□□□□ 0.13
LINC00272-201ENST00000367563 NCBP3Q53F19 620 aaKnown RBP15.84■□□□□ 0.13
LINC00272-201ENST00000367563 GAPVD1Q14C86 1478 aa15.84■□□□□ 0.13
LINC00272-201ENST00000367563 ERCC6L2Q5T890 1561 aa15.77■□□□□ 0.11
LINC00272-201ENST00000367563 PBRM1Q86U86 1689 aa15.76■□□□□ 0.11
LINC00272-201ENST00000367563 ABCA10Q8WWZ4 1543 aa15.75■□□□□ 0.11
LINC00272-201ENST00000367563 ABCA5Q8WWZ7 1642 aa15.73■□□□□ 0.11
LINC00272-201ENST00000367563 CNKSR2Q8WXI2 1034 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms