RNA–Protein interactions for RNA: ENST00000366860.9

CNIH4-204, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 3

Gene CNIH4, Length 912 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-204ENST00000366860 NISCHQ9Y2I1 1504 aa36.9■■■■□ 3.5
CNIH4-204ENST00000366860 CCDC180Q9P1Z9 1646 aa32.71■■■□□ 2.83
CNIH4-204ENST00000366860 AEBP2Q6ZN18 517 aaPredicted RBP31.33■■■□□ 2.61
CNIH4-204ENST00000366860 ABCC9O60706 1549 aa31.15■■■□□ 2.58
CNIH4-204ENST00000366860 ZCCHC6Q5VYS8 1495 aaKnown RBP30.93■■■□□ 2.54
CNIH4-204ENST00000366860 CHIC1Q5VXU3 224 aa30.89■■■□□ 2.54
CNIH4-204ENST00000366860 DCAF1Q9Y4B6 1507 aa30.65■■■□□ 2.5
CNIH4-204ENST00000366860 MYO15BQ96JP2 1530 aa30.57■■■□□ 2.48
CNIH4-204ENST00000366860 NACADO15069 1562 aa30.51■■■□□ 2.47
CNIH4-204ENST00000366860 RB1CC1Q8TDY2 1594 aa30.4■■■□□ 2.46
CNIH4-204ENST00000366860 DCAF8L2P0C7V8 631 aa30.35■■■□□ 2.45
CNIH4-204ENST00000366860 SCRIBQ14160 1630 aa29.77■■■□□ 2.36
CNIH4-204ENST00000366860 UNC13AQ9UPW8 1703 aa29.74■■■□□ 2.35
CNIH4-204ENST00000366860 SHROOM4Q9ULL8 1493 aa29.39■■■□□ 2.3
CNIH4-204ENST00000366860 BICRAQ9NZM4 1560 aa29.37■■■□□ 2.29
CNIH4-204ENST00000366860 PABPN1Q86U42 306 aaKnown RBP eCLIP29.08■■■□□ 2.25
CNIH4-204ENST00000366860 BAZ1AQ9NRL2 1556 aaPredicted RBP28.63■■■□□ 2.17
CNIH4-204ENST00000366860 CECR2Q9BXF3 1484 aa28.59■■■□□ 2.17
CNIH4-204ENST00000366860 EIF4G1Q04637 1599 aaKnown RBP28.58■■■□□ 2.17
CNIH4-204ENST00000366860 SMARCA4P51532 1647 aa28.57■■■□□ 2.16
CNIH4-204ENST00000366860 MROH2BQ7Z745 1585 aa28.41■■■□□ 2.14
CNIH4-204ENST00000366860 CC2D2AQ9P2K1 1620 aa28.29■■■□□ 2.12
CNIH4-204ENST00000366860 PEG3Q9GZU2 1588 aa28.29■■■□□ 2.12
CNIH4-204ENST00000366860 RSF1Q96T23 1441 aaPredicted RBP28.29■■■□□ 2.12
CNIH4-204ENST00000366860 SMARCA2P51531 1590 aa28.26■■■□□ 2.11
CNIH4-204ENST00000366860 WIZO95785 1651 aa28.18■■■□□ 2.1
CNIH4-204ENST00000366860 ATAD2BQ9ULI0 1458 aa28.15■■■□□ 2.1
CNIH4-204ENST00000366860 HMGXB3Q12766 1538 aa28.09■■■□□ 2.09
CNIH4-204ENST00000366860 NCAPD3P42695 1498 aa28.05■■■□□ 2.08
CNIH4-204ENST00000366860 BAZ1BQ9UIG0 1483 aaKnown RBP28.02■■■□□ 2.08
CNIH4-204ENST00000366860 TOP2AP11388 1531 aaKnown RBP27.98■■■□□ 2.07
CNIH4-204ENST00000366860 SUPT5HO00267 1087 aaKnown RBP27.94■■■□□ 2.06
CNIH4-204ENST00000366860 DNAJC5BQ9UF47 199 aa27.81■■■□□ 2.04
CNIH4-204ENST00000366860 CCDC88BA6NC98 1476 aa27.52■■■□□ 2
CNIH4-204ENST00000366860 PRDM2Q13029 1718 aa27.33■■□□□ 1.96
CNIH4-204ENST00000366860 LAMC3Q9Y6N6 1575 aa27.31■■□□□ 1.96
CNIH4-204ENST00000366860 CFTRP13569 1480 aa27.25■■□□□ 1.95
CNIH4-204ENST00000366860 CADPSQ9ULU8 1353 aa27.24■■□□□ 1.95
CNIH4-204ENST00000366860 PHF23Q9BUL5 403 aaPredicted RBP27.2■■□□□ 1.94
CNIH4-204ENST00000366860 NESP48681 1621 aa27.12■■□□□ 1.93
CNIH4-204ENST00000366860 PDS5BQ9NTI5 1447 aa27.04■■□□□ 1.92
CNIH4-204ENST00000366860 FANCD2Q9BXW9 1451 aa26.97■■□□□ 1.91
CNIH4-204ENST00000366860 KIF21AQ7Z4S6 1674 aa26.97■■□□□ 1.91
CNIH4-204ENST00000366860 CEP164Q9UPV0 1460 aa26.93■■□□□ 1.9
CNIH4-204ENST00000366860 ERCC6Q03468 1493 aa26.88■■□□□ 1.89
CNIH4-204ENST00000366860 ABCC8Q09428 1581 aa26.75■■□□□ 1.87
CNIH4-204ENST00000366860 MRC2Q9UBG0 1479 aa26.74■■□□□ 1.87
CNIH4-204ENST00000366860 THOC2Q8NI27 1593 aaKnown RBP26.74■■□□□ 1.87
CNIH4-204ENST00000366860 WRNQ14191 1432 aaPredicted RBP eCLIP26.72■■□□□ 1.87
CNIH4-204ENST00000366860 DNMBPQ6XZF7 1577 aa26.71■■□□□ 1.87
CNIH4-204ENST00000366860 BIVM-ERCC5R4GMW8 1640 aa26.68■■□□□ 1.86
CNIH4-204ENST00000366860 WDR62O43379 1518 aa26.67■■□□□ 1.86
CNIH4-204ENST00000366860 TOP2BQ02880 1626 aa26.66■■□□□ 1.86
CNIH4-204ENST00000366860 CUX1P39880 1505 aa26.65■■□□□ 1.86
CNIH4-204ENST00000366860 URB2Q14146 1524 aaKnown RBP26.65■■□□□ 1.86
CNIH4-204ENST00000366860 SYNJ1O43426 1573 aa26.64■■□□□ 1.86
CNIH4-204ENST00000366860 TOPBP1Q92547 1522 aa26.62■■□□□ 1.85
CNIH4-204ENST00000366860 SENP3Q9H4L4 574 aaPredicted RBP26.54■■□□□ 1.84
CNIH4-204ENST00000366860 FGD5Q6ZNL6 1462 aa26.47■■□□□ 1.83
CNIH4-204ENST00000366860 POLA1P09884 1462 aaPredicted RBP26.43■■□□□ 1.82
CNIH4-204ENST00000366860 TRIM41Q8WV44 630 aa26.41■■□□□ 1.82
CNIH4-204ENST00000366860 CUX2O14529 1486 aa26.41■■□□□ 1.82
CNIH4-204ENST00000366860 WDR97A6NE52 1622 aa26.34■■□□□ 1.81
CNIH4-204ENST00000366860 IFT140Q96RY7 1462 aa26.32■■□□□ 1.8
CNIH4-204ENST00000366860 TARBP1Q13395 1621 aaKnown RBP26.31■■□□□ 1.8
CNIH4-204ENST00000366860 SOGA1O94964 1423 aa26.27■■□□□ 1.8
CNIH4-204ENST00000366860 ABCA10Q8WWZ4 1543 aa26.27■■□□□ 1.8
CNIH4-204ENST00000366860 RAD54L2Q9Y4B4 1467 aa26.23■■□□□ 1.79
CNIH4-204ENST00000366860 ABCA5Q8WWZ7 1642 aa26.17■■□□□ 1.78
CNIH4-204ENST00000366860 EIF4G3O43432 1585 aaKnown RBP26.13■■□□□ 1.77
CNIH4-204ENST00000366860 KIF27Q86VH2 1401 aa26.12■■□□□ 1.77
CNIH4-204ENST00000366860 EEA1Q15075 1411 aa26.11■■□□□ 1.77
CNIH4-204ENST00000366860 PBRM1Q86U86 1689 aa26.07■■□□□ 1.76
CNIH4-204ENST00000366860 ZNF608Q9ULD9 1512 aaPredicted RBP26.06■■□□□ 1.76
CNIH4-204ENST00000366860 GAPVD1Q14C86 1478 aa26.04■■□□□ 1.76
CNIH4-204ENST00000366860 ERICH3Q5RHP9 1530 aa26■■□□□ 1.75
CNIH4-204ENST00000366860 TDRD9Q8NDG6 1382 aaKnown RBP26■■□□□ 1.75
CNIH4-204ENST00000366860 GRIN2BQ13224 1484 aa25.97■■□□□ 1.75
CNIH4-204ENST00000366860 CUL7Q14999 1698 aa25.96■■□□□ 1.75
CNIH4-204ENST00000366860 AQRO60306 1485 aaKnown RBP eCLIP25.96■■□□□ 1.75
CNIH4-204ENST00000366860 RUSC2Q8N2Y8 1516 aa25.94■■□□□ 1.74
CNIH4-204ENST00000366860 ADAMTS12P58397 1594 aa25.88■■□□□ 1.73
CNIH4-204ENST00000366860 MAGI1Q96QZ7 1491 aaPredicted RBP25.88■■□□□ 1.73
CNIH4-204ENST00000366860 SNAPC4Q5SXM2 1469 aa25.84■■□□□ 1.73
CNIH4-204ENST00000366860 IGF1RP08069 1367 aa25.82■■□□□ 1.72
CNIH4-204ENST00000366860 KIF21BO75037 1637 aa25.81■■□□□ 1.72
CNIH4-204ENST00000366860 CSRNP3Q8WYN3 585 aa25.79■■□□□ 1.72
CNIH4-204ENST00000366860 FHAD1B1AJZ9 1412 aa25.78■■□□□ 1.72
CNIH4-204ENST00000366860 FAM9AQ8IZU1 332 aaPredicted RBP25.77■■□□□ 1.72
CNIH4-204ENST00000366860 PRXQ9BXM0 1461 aa25.76■■□□□ 1.71
CNIH4-204ENST00000366860 SYNJ2O15056 1496 aa25.73■■□□□ 1.71
CNIH4-204ENST00000366860 CARMIL1Q5VZK9 1371 aa25.72■■□□□ 1.71
CNIH4-204ENST00000366860 RAPGEF2Q9Y4G8 1499 aa25.71■■□□□ 1.71
CNIH4-204ENST00000366860 CHD1O14646 1710 aa25.68■■□□□ 1.7
CNIH4-204ENST00000366860 GOLGA3Q08378 1498 aa25.66■■□□□ 1.7
CNIH4-204ENST00000366860 GRIN2AQ12879 1464 aa25.65■■□□□ 1.7
CNIH4-204ENST00000366860 CTTNBP2Q8WZ74 1663 aa25.58■■□□□ 1.68
CNIH4-204ENST00000366860 CHMP7Q8WUX9 453 aaPredicted RBP25.55■■□□□ 1.68
CNIH4-204ENST00000366860 CEP170Q5SW79 1584 aa25.49■■□□□ 1.67
CNIH4-204ENST00000366860 NUP160Q12769 1436 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms