RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 NISCHQ9Y2I1 1504 aa22.72■■□□□ 1.23
MRPL55-216ENST00000366744 CCDC180Q9P1Z9 1646 aa20.42■□□□□ 0.86
MRPL55-216ENST00000366744 ABCC9O60706 1549 aa19.87■□□□□ 0.77
MRPL55-216ENST00000366744 RB1CC1Q8TDY2 1594 aa19.2■□□□□ 0.66
MRPL55-216ENST00000366744 NACADO15069 1562 aa19.11■□□□□ 0.65
MRPL55-216ENST00000366744 DCAF8L2P0C7V8 631 aa18.95■□□□□ 0.62
MRPL55-216ENST00000366744 ZCCHC6Q5VYS8 1495 aaKnown RBP18.94■□□□□ 0.62
MRPL55-216ENST00000366744 MYO15BQ96JP2 1530 aa18.94■□□□□ 0.62
MRPL55-216ENST00000366744 DCAF1Q9Y4B6 1507 aa18.83■□□□□ 0.6
MRPL55-216ENST00000366744 UNC13AQ9UPW8 1703 aa18.82■□□□□ 0.6
MRPL55-216ENST00000366744 SCRIBQ14160 1630 aa18.55■□□□□ 0.56
MRPL55-216ENST00000366744 BICRAQ9NZM4 1560 aa18.5■□□□□ 0.55
MRPL55-216ENST00000366744 PABPN1Q86U42 306 aaKnown RBP eCLIP18.45■□□□□ 0.54
MRPL55-216ENST00000366744 SHROOM4Q9ULL8 1493 aa18.43■□□□□ 0.54
MRPL55-216ENST00000366744 DNAJC5BQ9UF47 199 aa18.09■□□□□ 0.49
MRPL55-216ENST00000366744 EIF4G1Q04637 1599 aaKnown RBP18.08■□□□□ 0.49
MRPL55-216ENST00000366744 CC2D2AQ9P2K1 1620 aa18.03■□□□□ 0.48
MRPL55-216ENST00000366744 CECR2Q9BXF3 1484 aa17.88■□□□□ 0.45
MRPL55-216ENST00000366744 SMARCA4P51532 1647 aa17.72■□□□□ 0.43
MRPL55-216ENST00000366744 BAZ1AQ9NRL2 1556 aaPredicted RBP17.7■□□□□ 0.42
MRPL55-216ENST00000366744 SMARCA2P51531 1590 aa17.64■□□□□ 0.41
MRPL55-216ENST00000366744 HMGXB3Q12766 1538 aa17.56■□□□□ 0.4
MRPL55-216ENST00000366744 ATAD2BQ9ULI0 1458 aa17.54■□□□□ 0.4
MRPL55-216ENST00000366744 NCAPD3P42695 1498 aa17.53■□□□□ 0.4
MRPL55-216ENST00000366744 PEG3Q9GZU2 1588 aa17.52■□□□□ 0.39
MRPL55-216ENST00000366744 BAZ1BQ9UIG0 1483 aaKnown RBP17.49■□□□□ 0.39
MRPL55-216ENST00000366744 MROH2BQ7Z745 1585 aa17.48■□□□□ 0.39
MRPL55-216ENST00000366744 WIZO95785 1651 aa17.36■□□□□ 0.37
MRPL55-216ENST00000366744 ERCC6Q03468 1493 aa17.23■□□□□ 0.35
MRPL55-216ENST00000366744 LAMC3Q9Y6N6 1575 aa17.22■□□□□ 0.35
MRPL55-216ENST00000366744 RSF1Q96T23 1441 aaPredicted RBP17.21■□□□□ 0.35
MRPL55-216ENST00000366744 TOP2AP11388 1531 aaKnown RBP17.2■□□□□ 0.34
MRPL55-216ENST00000366744 NESP48681 1621 aa17.14■□□□□ 0.33
MRPL55-216ENST00000366744 KIF21AQ7Z4S6 1674 aa17.1■□□□□ 0.33
MRPL55-216ENST00000366744 PRDM2Q13029 1718 aa17.07■□□□□ 0.32
MRPL55-216ENST00000366744 CUX2O14529 1486 aa17.05■□□□□ 0.32
MRPL55-216ENST00000366744 PDS5BQ9NTI5 1447 aa17.04■□□□□ 0.32
MRPL55-216ENST00000366744 THOC2Q8NI27 1593 aaKnown RBP17.02■□□□□ 0.31
MRPL55-216ENST00000366744 CADPSQ9ULU8 1353 aa17.02■□□□□ 0.31
MRPL55-216ENST00000366744 CEP164Q9UPV0 1460 aa16.93■□□□□ 0.3
MRPL55-216ENST00000366744 CFTRP13569 1480 aa16.92■□□□□ 0.3
MRPL55-216ENST00000366744 MRC2Q9UBG0 1479 aa16.89■□□□□ 0.29
MRPL55-216ENST00000366744 CCDC88BA6NC98 1476 aa16.88■□□□□ 0.29
MRPL55-216ENST00000366744 FANCD2Q9BXW9 1451 aa16.88■□□□□ 0.29
MRPL55-216ENST00000366744 WDR62O43379 1518 aa16.85■□□□□ 0.29
MRPL55-216ENST00000366744 SUPT5HO00267 1087 aaKnown RBP16.72■□□□□ 0.27
MRPL55-216ENST00000366744 URB2Q14146 1524 aaKnown RBP16.69■□□□□ 0.26
MRPL55-216ENST00000366744 ABCC8Q09428 1581 aa16.64■□□□□ 0.25
MRPL55-216ENST00000366744 DNMBPQ6XZF7 1577 aa16.64■□□□□ 0.25
MRPL55-216ENST00000366744 TOPBP1Q92547 1522 aa16.6■□□□□ 0.25
MRPL55-216ENST00000366744 IFT140Q96RY7 1462 aa16.54■□□□□ 0.24
MRPL55-216ENST00000366744 EIF4G3O43432 1585 aaKnown RBP16.48■□□□□ 0.23
MRPL55-216ENST00000366744 DNAJC5Q9H3Z4 198 aa16.45■□□□□ 0.22
MRPL55-216ENST00000366744 TARBP1Q13395 1621 aaKnown RBP16.45■□□□□ 0.22
MRPL55-216ENST00000366744 POLA1P09884 1462 aaPredicted RBP16.44■□□□□ 0.22
MRPL55-216ENST00000366744 CUX1P39880 1505 aa16.43■□□□□ 0.22
MRPL55-216ENST00000366744 WDR97A6NE52 1622 aa16.42■□□□□ 0.22
MRPL55-216ENST00000366744 FGD5Q6ZNL6 1462 aa16.42■□□□□ 0.22
MRPL55-216ENST00000366744 ZNF608Q9ULD9 1512 aaPredicted RBP16.4■□□□□ 0.22
MRPL55-216ENST00000366744 BIVM-ERCC5R4GMW8 1640 aa16.37■□□□□ 0.21
MRPL55-216ENST00000366744 TOP2BQ02880 1626 aa16.34■□□□□ 0.21
MRPL55-216ENST00000366744 SOGA1O94964 1423 aa16.34■□□□□ 0.21
MRPL55-216ENST00000366744 RAD54L2Q9Y4B4 1467 aa16.33■□□□□ 0.2
MRPL55-216ENST00000366744 PBRM1Q86U86 1689 aa16.33■□□□□ 0.2
MRPL55-216ENST00000366744 CHD1O14646 1710 aa16.33■□□□□ 0.2
MRPL55-216ENST00000366744 WRNQ14191 1432 aaPredicted RBP eCLIP16.31■□□□□ 0.2
MRPL55-216ENST00000366744 SYNJ1O43426 1573 aa16.3■□□□□ 0.2
MRPL55-216ENST00000366744 AQRO60306 1485 aaKnown RBP eCLIP16.28■□□□□ 0.28e-7■■■■■ 27.9
MRPL55-216ENST00000366744 ABCA5Q8WWZ7 1642 aa16.25■□□□□ 0.19
MRPL55-216ENST00000366744 ABCA10Q8WWZ4 1543 aa16.24■□□□□ 0.19
MRPL55-216ENST00000366744 TDRD9Q8NDG6 1382 aaKnown RBP16.23■□□□□ 0.19
MRPL55-216ENST00000366744 GRIN2BQ13224 1484 aa16.22■□□□□ 0.19
MRPL55-216ENST00000366744 MAGI1Q96QZ7 1491 aaPredicted RBP16.22■□□□□ 0.19
MRPL55-216ENST00000366744 OSCARQ8IYS5 282 aa16.21■□□□□ 0.19
MRPL55-216ENST00000366744 SNAPC4Q5SXM2 1469 aa16.21■□□□□ 0.19
MRPL55-216ENST00000366744 GAPVD1Q14C86 1478 aa16.2■□□□□ 0.18
MRPL55-216ENST00000366744 FBLN2P98095 1184 aa16.14■□□□□ 0.17
MRPL55-216ENST00000366744 SYNJ2O15056 1496 aa16.14■□□□□ 0.17
MRPL55-216ENST00000366744 ADAMTS12P58397 1594 aa16.12■□□□□ 0.17
MRPL55-216ENST00000366744 ERICH3Q5RHP9 1530 aa16.09■□□□□ 0.17
MRPL55-216ENST00000366744 RIMBP3CA6NJZ7 1639 aa16.09■□□□□ 0.17
MRPL55-216ENST00000366744 RIMBP3BA6NNM3 1639 aa16.09■□□□□ 0.17
MRPL55-216ENST00000366744 RIMBP3Q9UFD9 1639 aa16.09■□□□□ 0.17
MRPL55-216ENST00000366744 CHMP7Q8WUX9 453 aaPredicted RBP16.08■□□□□ 0.16
MRPL55-216ENST00000366744 ARHGEF11O15085 1522 aa16.04■□□□□ 0.16
MRPL55-216ENST00000366744 CLASP1Q7Z460 1538 aa16.04■□□□□ 0.16
MRPL55-216ENST00000366744 CUL7Q14999 1698 aa16.02■□□□□ 0.16
MRPL55-216ENST00000366744 GRIN2AQ12879 1464 aa16.02■□□□□ 0.15
MRPL55-216ENST00000366744 FHAD1B1AJZ9 1412 aa16■□□□□ 0.15
MRPL55-216ENST00000366744 KIF27Q86VH2 1401 aa15.99■□□□□ 0.15
MRPL55-216ENST00000366744 TRIM41Q8WV44 630 aa15.96■□□□□ 0.15
MRPL55-216ENST00000366744 CEP170Q5SW79 1584 aa15.95■□□□□ 0.14
MRPL55-216ENST00000366744 NUP160Q12769 1436 aa15.9■□□□□ 0.14
MRPL55-216ENST00000366744 RUSC2Q8N2Y8 1516 aa15.89■□□□□ 0.13
MRPL55-216ENST00000366744 SHROOM2Q13796 1616 aa15.88■□□□□ 0.13
MRPL55-216ENST00000366744 ARAP1Q96P48 1450 aa15.87■□□□□ 0.13
MRPL55-216ENST00000366744 IGF1RP08069 1367 aa15.8■□□□□ 0.12
MRPL55-216ENST00000366744 CYB5RLQ6IPT4 315 aa15.79■□□□□ 0.12
MRPL55-216ENST00000366744 CTTNBP2Q8WZ74 1663 aa15.77■□□□□ 0.12
MRPL55-216ENST00000366744 CARMIL1Q5VZK9 1371 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms