RNA–Protein interactions for RNA: ENST00000366511.1

CNST-201, Transcript of consortin, connexin sorting protein, humanhuman

TSL 3 BASIC

Gene CNST, Length 645 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNST-201ENST00000366511 NISCHQ9Y2I1 1504 aa23.46■■□□□ 1.35
CNST-201ENST00000366511 AEBP2Q6ZN18 517 aaPredicted RBP22.78■■□□□ 1.24
CNST-201ENST00000366511 CHIC1Q5VXU3 224 aa22.75■■□□□ 1.23
CNST-201ENST00000366511 ABCC9O60706 1549 aa21.47■■□□□ 1.03
CNST-201ENST00000366511 CCDC180Q9P1Z9 1646 aa21.31■■□□□ 1
CNST-201ENST00000366511 RB1CC1Q8TDY2 1594 aa20.38■□□□□ 0.85
CNST-201ENST00000366511 DNAJC5BQ9UF47 199 aa20.13■□□□□ 0.81
CNST-201ENST00000366511 NACADO15069 1562 aa20.12■□□□□ 0.81
CNST-201ENST00000366511 PHF23Q9BUL5 403 aaPredicted RBP20.07■□□□□ 0.8
CNST-201ENST00000366511 DCAF8L2P0C7V8 631 aa20.03■□□□□ 0.8
CNST-201ENST00000366511 UNC13AQ9UPW8 1703 aa20.02■□□□□ 0.8
CNST-201ENST00000366511 PABPN1Q86U42 306 aaKnown RBP eCLIP19.88■□□□□ 0.77
CNST-201ENST00000366511 BICRAQ9NZM4 1560 aa19.67■□□□□ 0.74
CNST-201ENST00000366511 MYO15BQ96JP2 1530 aa19.66■□□□□ 0.74
CNST-201ENST00000366511 SCRIBQ14160 1630 aa19.43■□□□□ 0.7
CNST-201ENST00000366511 SHROOM4Q9ULL8 1493 aa19.41■□□□□ 0.7
CNST-201ENST00000366511 CC2D2AQ9P2K1 1620 aa19.4■□□□□ 0.7
CNST-201ENST00000366511 ZCCHC6Q5VYS8 1495 aaKnown RBP19.4■□□□□ 0.7
CNST-201ENST00000366511 CECR2Q9BXF3 1484 aa19.35■□□□□ 0.69
CNST-201ENST00000366511 DCAF1Q9Y4B6 1507 aa19.34■□□□□ 0.69
CNST-201ENST00000366511 EIF4G1Q04637 1599 aaKnown RBP19.27■□□□□ 0.68
CNST-201ENST00000366511 SENP3Q9H4L4 574 aaPredicted RBP19.23■□□□□ 0.67
CNST-201ENST00000366511 DNAJC5Q9H3Z4 198 aa18.72■□□□□ 0.59
CNST-201ENST00000366511 PLPPR3Q6T4P5 718 aa18.69■□□□□ 0.58
CNST-201ENST00000366511 ERCC6Q03468 1493 aa18.64■□□□□ 0.57
CNST-201ENST00000366511 CUX2O14529 1486 aa18.58■□□□□ 0.57
CNST-201ENST00000366511 NCAPD3P42695 1498 aa18.46■□□□□ 0.54
CNST-201ENST00000366511 SMARCA2P51531 1590 aa18.45■□□□□ 0.54
CNST-201ENST00000366511 SMARCA4P51532 1647 aa18.45■□□□□ 0.54
CNST-201ENST00000366511 HMGXB3Q12766 1538 aa18.42■□□□□ 0.54
CNST-201ENST00000366511 ATAD2BQ9ULI0 1458 aa18.41■□□□□ 0.54
CNST-201ENST00000366511 BAZ1BQ9UIG0 1483 aaKnown RBP18.33■□□□□ 0.53
CNST-201ENST00000366511 NESP48681 1621 aa18.33■□□□□ 0.52
CNST-201ENST00000366511 BAZ1AQ9NRL2 1556 aaPredicted RBP18.3■□□□□ 0.52
CNST-201ENST00000366511 THOC2Q8NI27 1593 aaKnown RBP18.26■□□□□ 0.51
CNST-201ENST00000366511 KIF21AQ7Z4S6 1674 aa18.26■□□□□ 0.51
CNST-201ENST00000366511 LAMC3Q9Y6N6 1575 aa18.24■□□□□ 0.51
CNST-201ENST00000366511 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
CNST-201ENST00000366511 PDS5BQ9NTI5 1447 aa18.09■□□□□ 0.49
CNST-201ENST00000366511 MROH2BQ7Z745 1585 aa18.08■□□□□ 0.48
CNST-201ENST00000366511 TRIM41Q8WV44 630 aa18■□□□□ 0.47
CNST-201ENST00000366511 MRC2Q9UBG0 1479 aa17.96■□□□□ 0.47
CNST-201ENST00000366511 WIZO95785 1651 aa17.96■□□□□ 0.47
CNST-201ENST00000366511 CADPSQ9ULU8 1353 aa17.91■□□□□ 0.46
CNST-201ENST00000366511 WDR62O43379 1518 aa17.91■□□□□ 0.46
CNST-201ENST00000366511 CEP164Q9UPV0 1460 aa17.88■□□□□ 0.45
CNST-201ENST00000366511 FANCD2Q9BXW9 1451 aa17.8■□□□□ 0.44
CNST-201ENST00000366511 FOXD1Q16676 465 aa17.79■□□□□ 0.44
CNST-201ENST00000366511 PRDM2Q13029 1718 aa17.78■□□□□ 0.44
CNST-201ENST00000366511 TOP2AP11388 1531 aaKnown RBP17.67■□□□□ 0.42
CNST-201ENST00000366511 CFTRP13569 1480 aa17.66■□□□□ 0.42
CNST-201ENST00000366511 OSCARQ8IYS5 282 aa17.65■□□□□ 0.42
CNST-201ENST00000366511 URB2Q14146 1524 aaKnown RBP17.63■□□□□ 0.41
CNST-201ENST00000366511 RIMBP3CA6NJZ7 1639 aa17.57■□□□□ 0.4
CNST-201ENST00000366511 RIMBP3BA6NNM3 1639 aa17.57■□□□□ 0.4
CNST-201ENST00000366511 RIMBP3Q9UFD9 1639 aa17.57■□□□□ 0.4
CNST-201ENST00000366511 RSF1Q96T23 1441 aaPredicted RBP17.56■□□□□ 0.4
CNST-201ENST00000366511 PPP6R1Q9UPN7 881 aa17.52■□□□□ 0.4
CNST-201ENST00000366511 ADRA2BP18089 450 aa17.51■□□□□ 0.39
CNST-201ENST00000366511 IFT140Q96RY7 1462 aa17.48■□□□□ 0.39
CNST-201ENST00000366511 EIF4G3O43432 1585 aaKnown RBP17.46■□□□□ 0.39
CNST-201ENST00000366511 CHD1O14646 1710 aa17.46■□□□□ 0.39
CNST-201ENST00000366511 ZNF608Q9ULD9 1512 aaPredicted RBP17.44■□□□□ 0.38
CNST-201ENST00000366511 ARHGEF11O15085 1522 aa17.42■□□□□ 0.38
CNST-201ENST00000366511 TOPBP1Q92547 1522 aa17.42■□□□□ 0.38
CNST-201ENST00000366511 CCDC88BA6NC98 1476 aa17.4■□□□□ 0.38
CNST-201ENST00000366511 ABCC8Q09428 1581 aa17.39■□□□□ 0.37
CNST-201ENST00000366511 DNMBPQ6XZF7 1577 aa17.39■□□□□ 0.37
CNST-201ENST00000366511 FBLN2P98095 1184 aa17.3■□□□□ 0.36
CNST-201ENST00000366511 TARBP1Q13395 1621 aaKnown RBP17.29■□□□□ 0.36
CNST-201ENST00000366511 CYB5RLQ6IPT4 315 aa17.29■□□□□ 0.36
CNST-201ENST00000366511 TRHP20396 242 aaPredicted RBP17.28■□□□□ 0.36
CNST-201ENST00000366511 AQRO60306 1485 aaKnown RBP eCLIP17.25■□□□□ 0.352e-8■■■■□ 25.7
CNST-201ENST00000366511 POLA1P09884 1462 aaPredicted RBP17.21■□□□□ 0.35
CNST-201ENST00000366511 ARAP1Q96P48 1450 aa17.2■□□□□ 0.34
CNST-201ENST00000366511 SYNJ1O43426 1573 aa17.15■□□□□ 0.34
CNST-201ENST00000366511 WDR97A6NE52 1622 aa17.15■□□□□ 0.34
CNST-201ENST00000366511 RAD54L2Q9Y4B4 1467 aa17.15■□□□□ 0.34
CNST-201ENST00000366511 PBRM1Q86U86 1689 aa17.13■□□□□ 0.33
CNST-201ENST00000366511 SNAPC4Q5SXM2 1469 aa17.13■□□□□ 0.33
CNST-201ENST00000366511 SOGA1O94964 1423 aa17.13■□□□□ 0.33
CNST-201ENST00000366511 TDRD9Q8NDG6 1382 aaKnown RBP17.11■□□□□ 0.33
CNST-201ENST00000366511 FGD5Q6ZNL6 1462 aa17.11■□□□□ 0.33
CNST-201ENST00000366511 CHMP7Q8WUX9 453 aaPredicted RBP17.08■□□□□ 0.32
CNST-201ENST00000366511 CLASP1Q7Z460 1538 aa17.07■□□□□ 0.32
CNST-201ENST00000366511 MAGI1Q96QZ7 1491 aaPredicted RBP17.06■□□□□ 0.32
CNST-201ENST00000366511 GRIN2BQ13224 1484 aa17.03■□□□□ 0.32
CNST-201ENST00000366511 CUX1P39880 1505 aa17.01■□□□□ 0.31
CNST-201ENST00000366511 SYNJ2O15056 1496 aa17■□□□□ 0.31
CNST-201ENST00000366511 GAPVD1Q14C86 1478 aa16.94■□□□□ 0.3
CNST-201ENST00000366511 ABCA5Q8WWZ7 1642 aa16.92■□□□□ 0.3
CNST-201ENST00000366511 ABCA10Q8WWZ4 1543 aa16.86■□□□□ 0.29
CNST-201ENST00000366511 PIAS4Q8N2W9 510 aaPredicted RBP16.85■□□□□ 0.29
CNST-201ENST00000366511 ADAMTS12P58397 1594 aa16.83■□□□□ 0.28
CNST-201ENST00000366511 GRIN2AQ12879 1464 aa16.82■□□□□ 0.28
CNST-201ENST00000366511 CEP170Q5SW79 1584 aa16.79■□□□□ 0.28
CNST-201ENST00000366511 ERCC6L2Q5T890 1561 aa16.79■□□□□ 0.28
CNST-201ENST00000366511 BIVM-ERCC5R4GMW8 1640 aa16.78■□□□□ 0.28
CNST-201ENST00000366511 WRNQ14191 1432 aaPredicted RBP eCLIP16.77■□□□□ 0.27
CNST-201ENST00000366511 KIF13AQ9H1H9 1805 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms