RNA–Protein interactions for RNA: ENST00000361010.7

CALCA-202, Transcript of calcitonin related polypeptide alpha, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CALCA, Length 916 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-202ENST00000361010 AEBP2Q6ZN18 517 aaPredicted RBP25.44■■□□□ 1.66
CALCA-202ENST00000361010 CHIC1Q5VXU3 224 aa24.38■■□□□ 1.49
CALCA-202ENST00000361010 NISCHQ9Y2I1 1504 aa23.93■■□□□ 1.42
CALCA-202ENST00000361010 ABCC9O60706 1549 aa21.91■■□□□ 1.1
CALCA-202ENST00000361010 CCDC180Q9P1Z9 1646 aa21.56■■□□□ 1.04
CALCA-202ENST00000361010 SENP3Q9H4L4 574 aaPredicted RBP21.53■■□□□ 1.04
CALCA-202ENST00000361010 PHF23Q9BUL5 403 aaPredicted RBP21.48■■□□□ 1.03
CALCA-202ENST00000361010 DNAJC5BQ9UF47 199 aa20.81■□□□□ 0.92
CALCA-202ENST00000361010 RB1CC1Q8TDY2 1594 aa20.71■□□□□ 0.91
CALCA-202ENST00000361010 NACADO15069 1562 aa20.49■□□□□ 0.87
CALCA-202ENST00000361010 DCAF8L2P0C7V8 631 aa20.44■□□□□ 0.86
CALCA-202ENST00000361010 PABPN1Q86U42 306 aaKnown RBP eCLIP20.39■□□□□ 0.85
CALCA-202ENST00000361010 UNC13AQ9UPW8 1703 aa20.16■□□□□ 0.82
CALCA-202ENST00000361010 FOXD1Q16676 465 aa20.12■□□□□ 0.81
CALCA-202ENST00000361010 MYO15BQ96JP2 1530 aa20.09■□□□□ 0.81
CALCA-202ENST00000361010 BICRAQ9NZM4 1560 aa20.08■□□□□ 0.8
CALCA-202ENST00000361010 SHROOM4Q9ULL8 1493 aa19.79■□□□□ 0.76
CALCA-202ENST00000361010 CECR2Q9BXF3 1484 aa19.77■□□□□ 0.76
CALCA-202ENST00000361010 ZCCHC6Q5VYS8 1495 aaKnown RBP19.75■□□□□ 0.75
CALCA-202ENST00000361010 CC2D2AQ9P2K1 1620 aa19.74■□□□□ 0.75
CALCA-202ENST00000361010 DCAF1Q9Y4B6 1507 aa19.73■□□□□ 0.75
CALCA-202ENST00000361010 SCRIBQ14160 1630 aa19.67■□□□□ 0.74
CALCA-202ENST00000361010 EIF4G1Q04637 1599 aaKnown RBP19.63■□□□□ 0.73
CALCA-202ENST00000361010 PLPPR3Q6T4P5 718 aa19.59■□□□□ 0.73
CALCA-202ENST00000361010 DNAJC5Q9H3Z4 198 aa19.34■□□□□ 0.69
CALCA-202ENST00000361010 PPP6R1Q9UPN7 881 aa19.1■□□□□ 0.65
CALCA-202ENST00000361010 ADRA2BP18089 450 aa19.05■□□□□ 0.64
CALCA-202ENST00000361010 CUX2O14529 1486 aa19■□□□□ 0.63
CALCA-202ENST00000361010 ERCC6Q03468 1493 aa18.97■□□□□ 0.63
CALCA-202ENST00000361010 NCAPD3P42695 1498 aa18.93■□□□□ 0.62
CALCA-202ENST00000361010 PIAS4Q8N2W9 510 aaPredicted RBP18.86■□□□□ 0.61
CALCA-202ENST00000361010 ATAD2BQ9ULI0 1458 aa18.83■□□□□ 0.6
CALCA-202ENST00000361010 SMARCA2P51531 1590 aa18.76■□□□□ 0.59
CALCA-202ENST00000361010 HMGXB3Q12766 1538 aa18.74■□□□□ 0.59
CALCA-202ENST00000361010 NESP48681 1621 aa18.72■□□□□ 0.59
CALCA-202ENST00000361010 POTEDQ86YR6 584 aa18.72■□□□□ 0.59
CALCA-202ENST00000361010 SMARCA4P51532 1647 aa18.71■□□□□ 0.59
CALCA-202ENST00000361010 BAZ1BQ9UIG0 1483 aaKnown RBP18.65■□□□□ 0.58
CALCA-202ENST00000361010 MSH5O43196 834 aa18.61■□□□□ 0.57
CALCA-202ENST00000361010 BAZ1AQ9NRL2 1556 aaPredicted RBP18.6■□□□□ 0.57
CALCA-202ENST00000361010 THOC2Q8NI27 1593 aaKnown RBP18.55■□□□□ 0.56
CALCA-202ENST00000361010 LAMC3Q9Y6N6 1575 aa18.54■□□□□ 0.56
CALCA-202ENST00000361010 PEG3Q9GZU2 1588 aa18.51■□□□□ 0.55
CALCA-202ENST00000361010 PDS5BQ9NTI5 1447 aa18.49■□□□□ 0.55
CALCA-202ENST00000361010 KIF21AQ7Z4S6 1674 aa18.44■□□□□ 0.54
CALCA-202ENST00000361010 MROH2BQ7Z745 1585 aa18.43■□□□□ 0.54
CALCA-202ENST00000361010 TRIM41Q8WV44 630 aa18.42■□□□□ 0.54
CALCA-202ENST00000361010 CADPSQ9ULU8 1353 aa18.36■□□□□ 0.53
CALCA-202ENST00000361010 MRC2Q9UBG0 1479 aa18.32■□□□□ 0.52
CALCA-202ENST00000361010 WDR62O43379 1518 aa18.25■□□□□ 0.51
CALCA-202ENST00000361010 CEP164Q9UPV0 1460 aa18.2■□□□□ 0.5
CALCA-202ENST00000361010 WIZO95785 1651 aa18.18■□□□□ 0.5
CALCA-202ENST00000361010 FANCD2Q9BXW9 1451 aa18.15■□□□□ 0.5
CALCA-202ENST00000361010 OSCARQ8IYS5 282 aa18.14■□□□□ 0.49
CALCA-202ENST00000361010 CFTRP13569 1480 aa18.07■□□□□ 0.48
CALCA-202ENST00000361010 URB2Q14146 1524 aaKnown RBP17.99■□□□□ 0.47
CALCA-202ENST00000361010 RSF1Q96T23 1441 aaPredicted RBP17.96■□□□□ 0.47
CALCA-202ENST00000361010 TOP2AP11388 1531 aaKnown RBP17.95■□□□□ 0.46
CALCA-202ENST00000361010 RIMBP3CA6NJZ7 1639 aa17.86■□□□□ 0.45
CALCA-202ENST00000361010 RIMBP3BA6NNM3 1639 aa17.86■□□□□ 0.45
CALCA-202ENST00000361010 RIMBP3Q9UFD9 1639 aa17.86■□□□□ 0.45
CALCA-202ENST00000361010 IFT140Q96RY7 1462 aa17.84■□□□□ 0.45
CALCA-202ENST00000361010 ZNF608Q9ULD9 1512 aaPredicted RBP17.82■□□□□ 0.44
CALCA-202ENST00000361010 PRDM2Q13029 1718 aa17.8■□□□□ 0.44
CALCA-202ENST00000361010 ARHGEF11O15085 1522 aa17.78■□□□□ 0.44
CALCA-202ENST00000361010 CCDC88BA6NC98 1476 aa17.76■□□□□ 0.43
CALCA-202ENST00000361010 TOPBP1Q92547 1522 aa17.76■□□□□ 0.43
CALCA-202ENST00000361010 CYB5RLQ6IPT4 315 aa17.73■□□□□ 0.43
CALCA-202ENST00000361010 ABCC8Q09428 1581 aa17.72■□□□□ 0.43
CALCA-202ENST00000361010 EIF4G3O43432 1585 aaKnown RBP17.7■□□□□ 0.42
CALCA-202ENST00000361010 TRHP20396 242 aaPredicted RBP17.67■□□□□ 0.42
CALCA-202ENST00000361010 FBLN2P98095 1184 aa17.66■□□□□ 0.42
CALCA-202ENST00000361010 AQRO60306 1485 aaKnown RBP eCLIP17.66■□□□□ 0.42
CALCA-202ENST00000361010 DNMBPQ6XZF7 1577 aa17.66■□□□□ 0.42
CALCA-202ENST00000361010 CHD1O14646 1710 aa17.6■□□□□ 0.41
CALCA-202ENST00000361010 TARBP1Q13395 1621 aaKnown RBP17.59■□□□□ 0.41
CALCA-202ENST00000361010 ARAP1Q96P48 1450 aa17.59■□□□□ 0.41
CALCA-202ENST00000361010 POLA1P09884 1462 aaPredicted RBP17.56■□□□□ 0.4
CALCA-202ENST00000361010 TDRD9Q8NDG6 1382 aaKnown RBP17.52■□□□□ 0.39
CALCA-202ENST00000361010 RAD54L2Q9Y4B4 1467 aa17.51■□□□□ 0.39
CALCA-202ENST00000361010 SOGA1O94964 1423 aa17.51■□□□□ 0.39
CALCA-202ENST00000361010 CHMP7Q8WUX9 453 aaPredicted RBP17.47■□□□□ 0.39
CALCA-202ENST00000361010 SNAPC4Q5SXM2 1469 aa17.45■□□□□ 0.38
CALCA-202ENST00000361010 MAPK8IP2Q13387 824 aaPredicted RBP17.43■□□□□ 0.38
CALCA-202ENST00000361010 FGD5Q6ZNL6 1462 aa17.41■□□□□ 0.38
CALCA-202ENST00000361010 CLASP1Q7Z460 1538 aa17.41■□□□□ 0.38
CALCA-202ENST00000361010 SYNJ1O43426 1573 aa17.4■□□□□ 0.38
CALCA-202ENST00000361010 WDR97A6NE52 1622 aa17.4■□□□□ 0.38
CALCA-202ENST00000361010 MAGI1Q96QZ7 1491 aaPredicted RBP17.39■□□□□ 0.37
CALCA-202ENST00000361010 GRIN2BQ13224 1484 aa17.37■□□□□ 0.37
CALCA-202ENST00000361010 SYNJ2O15056 1496 aa17.34■□□□□ 0.37
CALCA-202ENST00000361010 CUX1P39880 1505 aa17.33■□□□□ 0.37
CALCA-202ENST00000361010 GAPVD1Q14C86 1478 aa17.28■□□□□ 0.36
CALCA-202ENST00000361010 SCAF1Q9H7N4 1312 aaKnown RBP17.27■□□□□ 0.36
CALCA-202ENST00000361010 PPP4R3CPQ6ZMV5 832 aa17.26■□□□□ 0.35
CALCA-202ENST00000361010 PBRM1Q86U86 1689 aa17.23■□□□□ 0.35
CALCA-202ENST00000361010 ABCA10Q8WWZ4 1543 aa17.19■□□□□ 0.34
CALCA-202ENST00000361010 ABCA5Q8WWZ7 1642 aa17.16■□□□□ 0.34
CALCA-202ENST00000361010 DMRT2Q9Y5R5 561 aa17.15■□□□□ 0.34
CALCA-202ENST00000361010 GRIN2AQ12879 1464 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms