RNA–Protein interactions for RNA: ENST00000360948.6

NTRK3-204, Transcript of neurotrophic receptor tyrosine kinase 3, humanhuman

TSL 5 BASIC

Gene NTRK3, Length 3,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK3-204ENST00000360948 NISCHQ9Y2I1 1504 aa28.79■■■□□ 2.2
NTRK3-204ENST00000360948 CCDC180Q9P1Z9 1646 aa24.9■■□□□ 1.58
NTRK3-204ENST00000360948 ZCCHC6Q5VYS8 1495 aaKnown RBP24.22■■□□□ 1.47
NTRK3-204ENST00000360948 DCAF8L2P0C7V8 631 aa23.92■■□□□ 1.42
NTRK3-204ENST00000360948 SHROOM4Q9ULL8 1493 aa23.83■■□□□ 1.4
NTRK3-204ENST00000360948 DCAF1Q9Y4B6 1507 aa23.75■■□□□ 1.39
NTRK3-204ENST00000360948 ABCC9O60706 1549 aa23.47■■□□□ 1.35
NTRK3-204ENST00000360948 MYO15BQ96JP2 1530 aa23.36■■□□□ 1.33
NTRK3-204ENST00000360948 NACADO15069 1562 aa23.18■■□□□ 1.3
NTRK3-204ENST00000360948 SUPT5HO00267 1087 aaKnown RBP23.09■■□□□ 1.29
NTRK3-204ENST00000360948 SCRIBQ14160 1630 aa23.04■■□□□ 1.28
NTRK3-204ENST00000360948 RB1CC1Q8TDY2 1594 aa22.93■■□□□ 1.26
NTRK3-204ENST00000360948 RSF1Q96T23 1441 aaPredicted RBP22.48■■□□□ 1.19
NTRK3-204ENST00000360948 UNC13AQ9UPW8 1703 aa22.42■■□□□ 1.18
NTRK3-204ENST00000360948 CECR2Q9BXF3 1484 aa22.4■■□□□ 1.18
NTRK3-204ENST00000360948 MROH2BQ7Z745 1585 aa22.28■■□□□ 1.16
NTRK3-204ENST00000360948 PABPN1Q86U42 306 aaKnown RBP eCLIP22.25■■□□□ 1.15
NTRK3-204ENST00000360948 BAZ1AQ9NRL2 1556 aaPredicted RBP22.22■■□□□ 1.15
NTRK3-204ENST00000360948 BICRAQ9NZM4 1560 aa22.22■■□□□ 1.15
NTRK3-204ENST00000360948 CHIC1Q5VXU3 224 aa22.17■■□□□ 1.14
NTRK3-204ENST00000360948 WIZO95785 1651 aa22.09■■□□□ 1.13
NTRK3-204ENST00000360948 SMARCA4P51532 1647 aa22.06■■□□□ 1.12
NTRK3-204ENST00000360948 TOP2AP11388 1531 aaKnown RBP21.85■■□□□ 1.09
NTRK3-204ENST00000360948 PEG3Q9GZU2 1588 aa21.74■■□□□ 1.07
NTRK3-204ENST00000360948 CCDC88BA6NC98 1476 aa21.67■■□□□ 1.06
NTRK3-204ENST00000360948 ATAD2BQ9ULI0 1458 aa21.67■■□□□ 1.06
NTRK3-204ENST00000360948 TRIM41Q8WV44 630 aa21.66■■□□□ 1.06
NTRK3-204ENST00000360948 SMARCA2P51531 1590 aa21.66■■□□□ 1.06
NTRK3-204ENST00000360948 BAZ1BQ9UIG0 1483 aaKnown RBP21.58■■□□□ 1.05
NTRK3-204ENST00000360948 EIF4G1Q04637 1599 aaKnown RBP21.56■■□□□ 1.04
NTRK3-204ENST00000360948 NCAPD3P42695 1498 aa21.42■■□□□ 1.02
NTRK3-204ENST00000360948 LOC105371045A0A1W2PR82 267 aa21.38■■□□□ 1.01
NTRK3-204ENST00000360948 HMGXB3Q12766 1538 aa21.38■■□□□ 1.01
NTRK3-204ENST00000360948 FAM9AQ8IZU1 332 aaPredicted RBP21.33■■□□□ 1
NTRK3-204ENST00000360948 ABCC8Q09428 1581 aa21.32■■□□□ 1
NTRK3-204ENST00000360948 CC2D2AQ9P2K1 1620 aa21.18■□□□□ 0.98
NTRK3-204ENST00000360948 WRNQ14191 1432 aaPredicted RBP eCLIP21.17■□□□□ 0.98
NTRK3-204ENST00000360948 EHMT2Q96KQ7 1210 aa21.05■□□□□ 0.96
NTRK3-204ENST00000360948 CFTRP13569 1480 aa21.03■□□□□ 0.96
NTRK3-204ENST00000360948 SYNJ1O43426 1573 aa21.02■□□□□ 0.96
NTRK3-204ENST00000360948 SOGA1O94964 1423 aa21■□□□□ 0.95
NTRK3-204ENST00000360948 EEA1Q15075 1411 aa20.98■□□□□ 0.95
NTRK3-204ENST00000360948 CADPSQ9ULU8 1353 aa20.93■□□□□ 0.94
NTRK3-204ENST00000360948 CSRNP3Q8WYN3 585 aa20.91■□□□□ 0.94
NTRK3-204ENST00000360948 TOP2BQ02880 1626 aa20.89■□□□□ 0.94
NTRK3-204ENST00000360948 RUSC2Q8N2Y8 1516 aa20.89■□□□□ 0.94
NTRK3-204ENST00000360948 BIVM-ERCC5R4GMW8 1640 aa20.83■□□□□ 0.93
NTRK3-204ENST00000360948 PRDM2Q13029 1718 aa20.82■□□□□ 0.92
NTRK3-204ENST00000360948 CUX1P39880 1505 aa20.8■□□□□ 0.92
NTRK3-204ENST00000360948 UBTFP17480 764 aaKnown RBP20.73■□□□□ 0.91
NTRK3-204ENST00000360948 GOLGA3Q08378 1498 aa20.72■□□□□ 0.91
NTRK3-204ENST00000360948 PCGF6Q9BYE7 350 aa20.71■□□□□ 0.91
NTRK3-204ENST00000360948 TNIKQ9UKE5 1360 aa20.71■□□□□ 0.91
NTRK3-204ENST00000360948 FANCD2Q9BXW9 1451 aa20.7■□□□□ 0.9
NTRK3-204ENST00000360948 CEP164Q9UPV0 1460 aa20.69■□□□□ 0.9
NTRK3-204ENST00000360948 NESP48681 1621 aa20.67■□□□□ 0.9
NTRK3-204ENST00000360948 DNAJC5BQ9UF47 199 aa20.66■□□□□ 0.9
NTRK3-204ENST00000360948 KIF21BO75037 1637 aa20.64■□□□□ 0.9
NTRK3-204ENST00000360948 CEP162Q5TB80 1403 aa20.64■□□□□ 0.89
NTRK3-204ENST00000360948 LAMC3Q9Y6N6 1575 aa20.63■□□□□ 0.89
NTRK3-204ENST00000360948 KIF27Q86VH2 1401 aa20.62■□□□□ 0.89
NTRK3-204ENST00000360948 TRIM26Q12899 539 aaPredicted RBP20.59■□□□□ 0.89
NTRK3-204ENST00000360948 FGD5Q6ZNL6 1462 aa20.56■□□□□ 0.88
NTRK3-204ENST00000360948 RAPGEF2Q9Y4G8 1499 aa20.55■□□□□ 0.88
NTRK3-204ENST00000360948 PDS5BQ9NTI5 1447 aa20.53■□□□□ 0.88
NTRK3-204ENST00000360948 DNMBPQ6XZF7 1577 aa20.51■□□□□ 0.87
NTRK3-204ENST00000360948 CUX2O14529 1486 aa20.51■□□□□ 0.87
NTRK3-204ENST00000360948 PRXQ9BXM0 1461 aa20.5■□□□□ 0.87
NTRK3-204ENST00000360948 TOPBP1Q92547 1522 aa20.49■□□□□ 0.87
NTRK3-204ENST00000360948 ERICH3Q5RHP9 1530 aa20.47■□□□□ 0.87
NTRK3-204ENST00000360948 PPARGC1BQ86YN6 1023 aaKnown RBP20.45■□□□□ 0.86
NTRK3-204ENST00000360948 CLIP1P30622 1438 aa20.43■□□□□ 0.86
NTRK3-204ENST00000360948 POLA1P09884 1462 aaPredicted RBP20.42■□□□□ 0.86
NTRK3-204ENST00000360948 URB2Q14146 1524 aaKnown RBP20.4■□□□□ 0.86
NTRK3-204ENST00000360948 IGF1RP08069 1367 aa20.4■□□□□ 0.86
NTRK3-204ENST00000360948 RAD54L2Q9Y4B4 1467 aa20.38■□□□□ 0.85
NTRK3-204ENST00000360948 RANGAP1P46060 587 aaPredicted RBP20.36■□□□□ 0.85
NTRK3-204ENST00000360948 ABCA10Q8WWZ4 1543 aa20.35■□□□□ 0.85
NTRK3-204ENST00000360948 KIF21AQ7Z4S6 1674 aa20.34■□□□□ 0.85
NTRK3-204ENST00000360948 CARMIL1Q5VZK9 1371 aa20.32■□□□□ 0.84
NTRK3-204ENST00000360948 HRCP23327 699 aa20.28■□□□□ 0.84
NTRK3-204ENST00000360948 VPS8Q8N3P4 1428 aa20.26■□□□□ 0.83
NTRK3-204ENST00000360948 MRC2Q9UBG0 1479 aa20.22■□□□□ 0.83
NTRK3-204ENST00000360948 TTBK1Q5TCY1 1321 aaPredicted RBP20.21■□□□□ 0.83
NTRK3-204ENST00000360948 TDRD9Q8NDG6 1382 aaKnown RBP20.2■□□□□ 0.82
NTRK3-204ENST00000360948 APLP2Q06481 763 aa20.18■□□□□ 0.82
NTRK3-204ENST00000360948 WDR97A6NE52 1622 aa20.18■□□□□ 0.82
NTRK3-204ENST00000360948 GAPVD1Q14C86 1478 aa20.15■□□□□ 0.82
NTRK3-204ENST00000360948 CUL7Q14999 1698 aa20.14■□□□□ 0.81
NTRK3-204ENST00000360948 ARAP1Q96P48 1450 aa20.14■□□□□ 0.81
NTRK3-204ENST00000360948 ABCA5Q8WWZ7 1642 aa20.13■□□□□ 0.81
NTRK3-204ENST00000360948 TARBP1Q13395 1621 aaKnown RBP20.11■□□□□ 0.81
NTRK3-204ENST00000360948 ERCC6Q03468 1493 aa20.11■□□□□ 0.81
NTRK3-204ENST00000360948 ARHGAP35Q9NRY4 1499 aa20.1■□□□□ 0.81
NTRK3-204ENST00000360948 WDR62O43379 1518 aa20.06■□□□□ 0.8
NTRK3-204ENST00000360948 IFT140Q96RY7 1462 aa20.01■□□□□ 0.79
NTRK3-204ENST00000360948 AQRO60306 1485 aaKnown RBP eCLIP20■□□□□ 0.79
NTRK3-204ENST00000360948 GRIN2BQ13224 1484 aa19.94■□□□□ 0.78
NTRK3-204ENST00000360948 CTTNBP2Q8WZ74 1663 aa19.94■□□□□ 0.78
NTRK3-204ENST00000360948 P3H3Q8IVL6 736 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms