RNA–Protein interactions for RNA: ENST00000360656.2

CH17-340M24.3-201, humanhuman

TSL 2 BASIC

Gene CH17-340M24.3, Length 598 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CH17-340M24.3-201ENST00000360656 NISCHQ9Y2I1 1504 aa23.59■■□□□ 1.37
CH17-340M24.3-201ENST00000360656 CCDC180Q9P1Z9 1646 aa21.22■□□□□ 0.99
CH17-340M24.3-201ENST00000360656 ABCC9O60706 1549 aa20.91■□□□□ 0.94
CH17-340M24.3-201ENST00000360656 RB1CC1Q8TDY2 1594 aa20.04■□□□□ 0.8
CH17-340M24.3-201ENST00000360656 NACADO15069 1562 aa19.92■□□□□ 0.78
CH17-340M24.3-201ENST00000360656 UNC13AQ9UPW8 1703 aa19.78■□□□□ 0.76
CH17-340M24.3-201ENST00000360656 MYO15BQ96JP2 1530 aa19.69■□□□□ 0.74
CH17-340M24.3-201ENST00000360656 DCAF8L2P0C7V8 631 aa19.68■□□□□ 0.74
CH17-340M24.3-201ENST00000360656 ZCCHC6Q5VYS8 1495 aaKnown RBP19.6■□□□□ 0.73
CH17-340M24.3-201ENST00000360656 DCAF1Q9Y4B6 1507 aa19.51■□□□□ 0.71
CH17-340M24.3-201ENST00000360656 BICRAQ9NZM4 1560 aa19.47■□□□□ 0.71
CH17-340M24.3-201ENST00000360656 PABPN1Q86U42 306 aaKnown RBP eCLIP19.4■□□□□ 0.7
CH17-340M24.3-201ENST00000360656 DNAJC5BQ9UF47 199 aa19.38■□□□□ 0.69
CH17-340M24.3-201ENST00000360656 SCRIBQ14160 1630 aa19.3■□□□□ 0.68
CH17-340M24.3-201ENST00000360656 SHROOM4Q9ULL8 1493 aa19.19■□□□□ 0.66
CH17-340M24.3-201ENST00000360656 CC2D2AQ9P2K1 1620 aa18.97■□□□□ 0.63
CH17-340M24.3-201ENST00000360656 EIF4G1Q04637 1599 aaKnown RBP18.95■□□□□ 0.62
CH17-340M24.3-201ENST00000360656 CECR2Q9BXF3 1484 aa18.81■□□□□ 0.6
CH17-340M24.3-201ENST00000360656 SMARCA4P51532 1647 aa18.43■□□□□ 0.54
CH17-340M24.3-201ENST00000360656 NCAPD3P42695 1498 aa18.33■□□□□ 0.52
CH17-340M24.3-201ENST00000360656 BAZ1AQ9NRL2 1556 aaPredicted RBP18.32■□□□□ 0.52
CH17-340M24.3-201ENST00000360656 SMARCA2P51531 1590 aa18.31■□□□□ 0.52
CH17-340M24.3-201ENST00000360656 ATAD2BQ9ULI0 1458 aa18.31■□□□□ 0.52
CH17-340M24.3-201ENST00000360656 HMGXB3Q12766 1538 aa18.29■□□□□ 0.52
CH17-340M24.3-201ENST00000360656 PEG3Q9GZU2 1588 aa18.23■□□□□ 0.51
CH17-340M24.3-201ENST00000360656 MROH2BQ7Z745 1585 aa18.18■□□□□ 0.5
CH17-340M24.3-201ENST00000360656 BAZ1BQ9UIG0 1483 aaKnown RBP18.16■□□□□ 0.5
CH17-340M24.3-201ENST00000360656 WIZO95785 1651 aa18.04■□□□□ 0.48
CH17-340M24.3-201ENST00000360656 ERCC6Q03468 1493 aa18.03■□□□□ 0.48
CH17-340M24.3-201ENST00000360656 NESP48681 1621 aa18.03■□□□□ 0.48
CH17-340M24.3-201ENST00000360656 LAMC3Q9Y6N6 1575 aa17.97■□□□□ 0.47
CH17-340M24.3-201ENST00000360656 CUX2O14529 1486 aa17.96■□□□□ 0.47
CH17-340M24.3-201ENST00000360656 KIF21AQ7Z4S6 1674 aa17.95■□□□□ 0.46
CH17-340M24.3-201ENST00000360656 THOC2Q8NI27 1593 aaKnown RBP17.91■□□□□ 0.46
CH17-340M24.3-201ENST00000360656 RSF1Q96T23 1441 aaPredicted RBP17.81■□□□□ 0.44
CH17-340M24.3-201ENST00000360656 TOP2AP11388 1531 aaKnown RBP17.79■□□□□ 0.44
CH17-340M24.3-201ENST00000360656 PDS5BQ9NTI5 1447 aa17.76■□□□□ 0.43
CH17-340M24.3-201ENST00000360656 CADPSQ9ULU8 1353 aa17.75■□□□□ 0.43
CH17-340M24.3-201ENST00000360656 PRDM2Q13029 1718 aa17.72■□□□□ 0.43
CH17-340M24.3-201ENST00000360656 DNAJC5Q9H3Z4 198 aa17.66■□□□□ 0.42
CH17-340M24.3-201ENST00000360656 MRC2Q9UBG0 1479 aa17.65■□□□□ 0.42
CH17-340M24.3-201ENST00000360656 WDR62O43379 1518 aa17.64■□□□□ 0.41
CH17-340M24.3-201ENST00000360656 CFTRP13569 1480 aa17.62■□□□□ 0.41
CH17-340M24.3-201ENST00000360656 CEP164Q9UPV0 1460 aa17.62■□□□□ 0.41
CH17-340M24.3-201ENST00000360656 FANCD2Q9BXW9 1451 aa17.6■□□□□ 0.41
CH17-340M24.3-201ENST00000360656 CCDC88BA6NC98 1476 aa17.52■□□□□ 0.4
CH17-340M24.3-201ENST00000360656 URB2Q14146 1524 aaKnown RBP17.47■□□□□ 0.39
CH17-340M24.3-201ENST00000360656 AEBP2Q6ZN18 517 aaPredicted RBP17.45■□□□□ 0.38
CH17-340M24.3-201ENST00000360656 TOPBP1Q92547 1522 aa17.31■□□□□ 0.36
CH17-340M24.3-201ENST00000360656 DNMBPQ6XZF7 1577 aa17.3■□□□□ 0.36
CH17-340M24.3-201ENST00000360656 ABCC8Q09428 1581 aa17.25■□□□□ 0.35
CH17-340M24.3-201ENST00000360656 IFT140Q96RY7 1462 aa17.24■□□□□ 0.35
CH17-340M24.3-201ENST00000360656 EIF4G3O43432 1585 aaKnown RBP17.22■□□□□ 0.35
CH17-340M24.3-201ENST00000360656 ZNF608Q9ULD9 1512 aaPredicted RBP17.21■□□□□ 0.34
CH17-340M24.3-201ENST00000360656 TARBP1Q13395 1621 aaKnown RBP17.2■□□□□ 0.34
CH17-340M24.3-201ENST00000360656 CHD1O14646 1710 aa17.13■□□□□ 0.33
CH17-340M24.3-201ENST00000360656 POLA1P09884 1462 aaPredicted RBP17.13■□□□□ 0.33
CH17-340M24.3-201ENST00000360656 CUX1P39880 1505 aa17.08■□□□□ 0.32
CH17-340M24.3-201ENST00000360656 WDR97A6NE52 1622 aa17.07■□□□□ 0.32
CH17-340M24.3-201ENST00000360656 SUPT5HO00267 1087 aaKnown RBP17.07■□□□□ 0.32
CH17-340M24.3-201ENST00000360656 OSCARQ8IYS5 282 aa17.06■□□□□ 0.32
CH17-340M24.3-201ENST00000360656 FGD5Q6ZNL6 1462 aa17.05■□□□□ 0.32
CH17-340M24.3-201ENST00000360656 RAD54L2Q9Y4B4 1467 aa17.05■□□□□ 0.32
CH17-340M24.3-201ENST00000360656 AQRO60306 1485 aaKnown RBP eCLIP17.04■□□□□ 0.32
CH17-340M24.3-201ENST00000360656 RIMBP3CA6NJZ7 1639 aa17.01■□□□□ 0.31
CH17-340M24.3-201ENST00000360656 RIMBP3BA6NNM3 1639 aa17.01■□□□□ 0.31
CH17-340M24.3-201ENST00000360656 RIMBP3Q9UFD9 1639 aa17.01■□□□□ 0.31
CH17-340M24.3-201ENST00000360656 SOGA1O94964 1423 aa17■□□□□ 0.31
CH17-340M24.3-201ENST00000360656 PBRM1Q86U86 1689 aa17■□□□□ 0.31
CH17-340M24.3-201ENST00000360656 CHIC1Q5VXU3 224 aa16.96■□□□□ 0.31
CH17-340M24.3-201ENST00000360656 TRIM41Q8WV44 630 aa16.96■□□□□ 0.31
CH17-340M24.3-201ENST00000360656 BIVM-ERCC5R4GMW8 1640 aa16.94■□□□□ 0.3
CH17-340M24.3-201ENST00000360656 TDRD9Q8NDG6 1382 aaKnown RBP16.93■□□□□ 0.3
CH17-340M24.3-201ENST00000360656 SNAPC4Q5SXM2 1469 aa16.92■□□□□ 0.3
CH17-340M24.3-201ENST00000360656 ARHGEF11O15085 1522 aa16.91■□□□□ 0.3
CH17-340M24.3-201ENST00000360656 ABCA5Q8WWZ7 1642 aa16.91■□□□□ 0.3
CH17-340M24.3-201ENST00000360656 TOP2BQ02880 1626 aa16.88■□□□□ 0.29
CH17-340M24.3-201ENST00000360656 SYNJ1O43426 1573 aa16.88■□□□□ 0.29
CH17-340M24.3-201ENST00000360656 MAGI1Q96QZ7 1491 aaPredicted RBP16.87■□□□□ 0.29
CH17-340M24.3-201ENST00000360656 ABCA10Q8WWZ4 1543 aa16.87■□□□□ 0.29
CH17-340M24.3-201ENST00000360656 GRIN2BQ13224 1484 aa16.86■□□□□ 0.29
CH17-340M24.3-201ENST00000360656 GAPVD1Q14C86 1478 aa16.83■□□□□ 0.28
CH17-340M24.3-201ENST00000360656 CLASP1Q7Z460 1538 aa16.83■□□□□ 0.28
CH17-340M24.3-201ENST00000360656 FBLN2P98095 1184 aa16.82■□□□□ 0.28
CH17-340M24.3-201ENST00000360656 WRNQ14191 1432 aaPredicted RBP eCLIP16.81■□□□□ 0.28
CH17-340M24.3-201ENST00000360656 SYNJ2O15056 1496 aa16.8■□□□□ 0.28
CH17-340M24.3-201ENST00000360656 ADAMTS12P58397 1594 aa16.77■□□□□ 0.27
CH17-340M24.3-201ENST00000360656 ARAP1Q96P48 1450 aa16.75■□□□□ 0.27
CH17-340M24.3-201ENST00000360656 CHMP7Q8WUX9 453 aaPredicted RBP16.73■□□□□ 0.27
CH17-340M24.3-201ENST00000360656 GRIN2AQ12879 1464 aa16.67■□□□□ 0.26
CH17-340M24.3-201ENST00000360656 ERICH3Q5RHP9 1530 aa16.67■□□□□ 0.26
CH17-340M24.3-201ENST00000360656 CEP170Q5SW79 1584 aa16.66■□□□□ 0.26
CH17-340M24.3-201ENST00000360656 CYB5RLQ6IPT4 315 aa16.65■□□□□ 0.26
CH17-340M24.3-201ENST00000360656 FHAD1B1AJZ9 1412 aa16.62■□□□□ 0.25
CH17-340M24.3-201ENST00000360656 SHROOM2Q13796 1616 aa16.6■□□□□ 0.25
CH17-340M24.3-201ENST00000360656 NUP160Q12769 1436 aa16.6■□□□□ 0.25
CH17-340M24.3-201ENST00000360656 ERCC6L2Q5T890 1561 aa16.58■□□□□ 0.24
CH17-340M24.3-201ENST00000360656 CUL7Q14999 1698 aa16.54■□□□□ 0.24
CH17-340M24.3-201ENST00000360656 RUSC2Q8N2Y8 1516 aa16.52■□□□□ 0.24
CH17-340M24.3-201ENST00000360656 KIF27Q86VH2 1401 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms