RNA–Protein interactions for RNA: ENST00000359369.8

RBFOX2-202, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 1,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-202ENST00000359369 NISCHQ9Y2I1 1504 aa24.94■■□□□ 1.58
RBFOX2-202ENST00000359369 AEBP2Q6ZN18 517 aaPredicted RBP22.62■■□□□ 1.21
RBFOX2-202ENST00000359369 ABCC9O60706 1549 aa22.39■■□□□ 1.17
RBFOX2-202ENST00000359369 CCDC180Q9P1Z9 1646 aa22.35■■□□□ 1.17
RBFOX2-202ENST00000359369 RB1CC1Q8TDY2 1594 aa21.28■■□□□ 1
RBFOX2-202ENST00000359369 CHIC1Q5VXU3 224 aa21.2■□□□□ 0.98
RBFOX2-202ENST00000359369 DCAF8L2P0C7V8 631 aa21.12■□□□□ 0.97
RBFOX2-202ENST00000359369 NACADO15069 1562 aa21.12■□□□□ 0.97
RBFOX2-202ENST00000359369 DNAJC5BQ9UF47 199 aa20.96■□□□□ 0.95
RBFOX2-202ENST00000359369 PABPN1Q86U42 306 aaKnown RBP eCLIP20.86■□□□□ 0.93
RBFOX2-202ENST00000359369 UNC13AQ9UPW8 1703 aa20.81■□□□□ 0.92
RBFOX2-202ENST00000359369 MYO15BQ96JP2 1530 aa20.8■□□□□ 0.92
RBFOX2-202ENST00000359369 ZCCHC6Q5VYS8 1495 aaKnown RBP20.67■□□□□ 0.9
RBFOX2-202ENST00000359369 BICRAQ9NZM4 1560 aa20.66■□□□□ 0.9
RBFOX2-202ENST00000359369 DCAF1Q9Y4B6 1507 aa20.56■□□□□ 0.88
RBFOX2-202ENST00000359369 SCRIBQ14160 1630 aa20.44■□□□□ 0.86
RBFOX2-202ENST00000359369 SHROOM4Q9ULL8 1493 aa20.33■□□□□ 0.85
RBFOX2-202ENST00000359369 CC2D2AQ9P2K1 1620 aa20.2■□□□□ 0.82
RBFOX2-202ENST00000359369 EIF4G1Q04637 1599 aaKnown RBP20.16■□□□□ 0.82
RBFOX2-202ENST00000359369 CECR2Q9BXF3 1484 aa20.14■□□□□ 0.81
RBFOX2-202ENST00000359369 SENP3Q9H4L4 574 aaPredicted RBP19.51■□□□□ 0.71
RBFOX2-202ENST00000359369 NCAPD3P42695 1498 aa19.5■□□□□ 0.71
RBFOX2-202ENST00000359369 ATAD2BQ9ULI0 1458 aa19.47■□□□□ 0.71
RBFOX2-202ENST00000359369 SMARCA4P51532 1647 aa19.46■□□□□ 0.71
RBFOX2-202ENST00000359369 SMARCA2P51531 1590 aa19.4■□□□□ 0.7
RBFOX2-202ENST00000359369 HMGXB3Q12766 1538 aa19.36■□□□□ 0.69
RBFOX2-202ENST00000359369 BAZ1AQ9NRL2 1556 aaPredicted RBP19.35■□□□□ 0.69
RBFOX2-202ENST00000359369 ERCC6Q03468 1493 aa19.32■□□□□ 0.68
RBFOX2-202ENST00000359369 BAZ1BQ9UIG0 1483 aaKnown RBP19.3■□□□□ 0.68
RBFOX2-202ENST00000359369 MROH2BQ7Z745 1585 aa19.24■□□□□ 0.67
RBFOX2-202ENST00000359369 PEG3Q9GZU2 1588 aa19.24■□□□□ 0.67
RBFOX2-202ENST00000359369 NESP48681 1621 aa19.24■□□□□ 0.67
RBFOX2-202ENST00000359369 CUX2O14529 1486 aa19.23■□□□□ 0.67
RBFOX2-202ENST00000359369 DNAJC5Q9H3Z4 198 aa19.2■□□□□ 0.66
RBFOX2-202ENST00000359369 PHF23Q9BUL5 403 aaPredicted RBP19.07■□□□□ 0.64
RBFOX2-202ENST00000359369 LAMC3Q9Y6N6 1575 aa19.06■□□□□ 0.64
RBFOX2-202ENST00000359369 WIZO95785 1651 aa19.02■□□□□ 0.64
RBFOX2-202ENST00000359369 THOC2Q8NI27 1593 aaKnown RBP19.01■□□□□ 0.63
RBFOX2-202ENST00000359369 KIF21AQ7Z4S6 1674 aa18.99■□□□□ 0.63
RBFOX2-202ENST00000359369 PDS5BQ9NTI5 1447 aa18.96■□□□□ 0.63
RBFOX2-202ENST00000359369 CADPSQ9ULU8 1353 aa18.92■□□□□ 0.62
RBFOX2-202ENST00000359369 RSF1Q96T23 1441 aaPredicted RBP18.84■□□□□ 0.61
RBFOX2-202ENST00000359369 MRC2Q9UBG0 1479 aa18.8■□□□□ 0.6
RBFOX2-202ENST00000359369 TOP2AP11388 1531 aaKnown RBP18.76■□□□□ 0.59
RBFOX2-202ENST00000359369 WDR62O43379 1518 aa18.75■□□□□ 0.59
RBFOX2-202ENST00000359369 CEP164Q9UPV0 1460 aa18.74■□□□□ 0.59
RBFOX2-202ENST00000359369 FANCD2Q9BXW9 1451 aa18.72■□□□□ 0.59
RBFOX2-202ENST00000359369 CFTRP13569 1480 aa18.71■□□□□ 0.59
RBFOX2-202ENST00000359369 URB2Q14146 1524 aaKnown RBP18.57■□□□□ 0.56
RBFOX2-202ENST00000359369 CCDC88BA6NC98 1476 aa18.56■□□□□ 0.56
RBFOX2-202ENST00000359369 PRDM2Q13029 1718 aa18.53■□□□□ 0.56
RBFOX2-202ENST00000359369 TRIM41Q8WV44 630 aa18.44■□□□□ 0.54
RBFOX2-202ENST00000359369 OSCARQ8IYS5 282 aa18.38■□□□□ 0.53
RBFOX2-202ENST00000359369 TOPBP1Q92547 1522 aa18.37■□□□□ 0.53
RBFOX2-202ENST00000359369 IFT140Q96RY7 1462 aa18.35■□□□□ 0.53
RBFOX2-202ENST00000359369 ZNF608Q9ULD9 1512 aaPredicted RBP18.35■□□□□ 0.53
RBFOX2-202ENST00000359369 ABCC8Q09428 1581 aa18.3■□□□□ 0.52
RBFOX2-202ENST00000359369 DNMBPQ6XZF7 1577 aa18.3■□□□□ 0.52
RBFOX2-202ENST00000359369 EIF4G3O43432 1585 aaKnown RBP18.25■□□□□ 0.51
RBFOX2-202ENST00000359369 POTEDQ86YR6 584 aa18.23■□□□□ 0.51
RBFOX2-202ENST00000359369 TARBP1Q13395 1621 aaKnown RBP18.2■□□□□ 0.5
RBFOX2-202ENST00000359369 FOXD1Q16676 465 aa18.2■□□□□ 0.5
RBFOX2-202ENST00000359369 AQRO60306 1485 aaKnown RBP eCLIP18.19■□□□□ 0.5
RBFOX2-202ENST00000359369 POLA1P09884 1462 aaPredicted RBP18.18■□□□□ 0.5
RBFOX2-202ENST00000359369 RIMBP3CA6NJZ7 1639 aa18.15■□□□□ 0.5
RBFOX2-202ENST00000359369 RIMBP3BA6NNM3 1639 aa18.15■□□□□ 0.5
RBFOX2-202ENST00000359369 RIMBP3Q9UFD9 1639 aa18.15■□□□□ 0.5
RBFOX2-202ENST00000359369 RAD54L2Q9Y4B4 1467 aa18.14■□□□□ 0.5
RBFOX2-202ENST00000359369 SOGA1O94964 1423 aa18.11■□□□□ 0.49
RBFOX2-202ENST00000359369 CHD1O14646 1710 aa18.11■□□□□ 0.49
RBFOX2-202ENST00000359369 FBLN2P98095 1184 aa18.1■□□□□ 0.49
RBFOX2-202ENST00000359369 SUPT5HO00267 1087 aaKnown RBP18.09■□□□□ 0.49
RBFOX2-202ENST00000359369 FGD5Q6ZNL6 1462 aa18.09■□□□□ 0.49
RBFOX2-202ENST00000359369 ARHGEF11O15085 1522 aa18.09■□□□□ 0.49
RBFOX2-202ENST00000359369 TDRD9Q8NDG6 1382 aaKnown RBP18.09■□□□□ 0.49
RBFOX2-202ENST00000359369 CUX1P39880 1505 aa18.07■□□□□ 0.48
RBFOX2-202ENST00000359369 SNAPC4Q5SXM2 1469 aa18.01■□□□□ 0.47
RBFOX2-202ENST00000359369 WDR97A6NE52 1622 aa17.98■□□□□ 0.47
RBFOX2-202ENST00000359369 CYB5RLQ6IPT4 315 aa17.98■□□□□ 0.47
RBFOX2-202ENST00000359369 CHMP7Q8WUX9 453 aaPredicted RBP17.94■□□□□ 0.46
RBFOX2-202ENST00000359369 GRIN2BQ13224 1484 aa17.94■□□□□ 0.46
RBFOX2-202ENST00000359369 MAGI1Q96QZ7 1491 aaPredicted RBP17.93■□□□□ 0.46
RBFOX2-202ENST00000359369 ARAP1Q96P48 1450 aa17.91■□□□□ 0.46
RBFOX2-202ENST00000359369 PBRM1Q86U86 1689 aa17.89■□□□□ 0.45
RBFOX2-202ENST00000359369 GAPVD1Q14C86 1478 aa17.89■□□□□ 0.45
RBFOX2-202ENST00000359369 CLASP1Q7Z460 1538 aa17.88■□□□□ 0.45
RBFOX2-202ENST00000359369 SYNJ1O43426 1573 aa17.88■□□□□ 0.45
RBFOX2-202ENST00000359369 SYNJ2O15056 1496 aa17.87■□□□□ 0.45
RBFOX2-202ENST00000359369 ABCA10Q8WWZ4 1543 aa17.86■□□□□ 0.45
RBFOX2-202ENST00000359369 ABCA5Q8WWZ7 1642 aa17.84■□□□□ 0.45
RBFOX2-202ENST00000359369 WRNQ14191 1432 aaPredicted RBP eCLIP17.8■□□□□ 0.44
RBFOX2-202ENST00000359369 TRHP20396 242 aaPredicted RBP17.79■□□□□ 0.44
RBFOX2-202ENST00000359369 TOP2BQ02880 1626 aa17.78■□□□□ 0.44
RBFOX2-202ENST00000359369 BIVM-ERCC5R4GMW8 1640 aa17.78■□□□□ 0.44
RBFOX2-202ENST00000359369 GRIN2AQ12879 1464 aa17.71■□□□□ 0.43
RBFOX2-202ENST00000359369 ADAMTS12P58397 1594 aa17.71■□□□□ 0.43
RBFOX2-202ENST00000359369 CEP170Q5SW79 1584 aa17.66■□□□□ 0.42
RBFOX2-202ENST00000359369 FHAD1B1AJZ9 1412 aa17.65■□□□□ 0.42
RBFOX2-202ENST00000359369 ERCC6L2Q5T890 1561 aa17.64■□□□□ 0.41
RBFOX2-202ENST00000359369 NUP160Q12769 1436 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms