RNA–Protein interactions for RNA: ENST00000358268.6

LCA5L-202, Transcript of LCA5L, lebercilin like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5L, Length 2,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5L-202ENST00000358268 NISCHQ9Y2I1 1504 aa23.99■■□□□ 1.43
LCA5L-202ENST00000358268 CCDC180Q9P1Z9 1646 aa22.17■■□□□ 1.14
LCA5L-202ENST00000358268 ABCC9O60706 1549 aa21.65■■□□□ 1.06
LCA5L-202ENST00000358268 RB1CC1Q8TDY2 1594 aa21.03■□□□□ 0.96
LCA5L-202ENST00000358268 NACADO15069 1562 aa20.88■□□□□ 0.93
LCA5L-202ENST00000358268 MYO15BQ96JP2 1530 aa20.73■□□□□ 0.91
LCA5L-202ENST00000358268 SHROOM4Q9ULL8 1493 aa20.59■□□□□ 0.89
LCA5L-202ENST00000358268 UNC13AQ9UPW8 1703 aa20.45■□□□□ 0.86
LCA5L-202ENST00000358268 DNAJC5BQ9UF47 199 aa20.4■□□□□ 0.86
LCA5L-202ENST00000358268 BICRAQ9NZM4 1560 aa20.25■□□□□ 0.83
LCA5L-202ENST00000358268 DCAF1Q9Y4B6 1507 aa20.23■□□□□ 0.83
LCA5L-202ENST00000358268 ZCCHC6Q5VYS8 1495 aaKnown RBP19.86■□□□□ 0.77
LCA5L-202ENST00000358268 CC2D2AQ9P2K1 1620 aa19.84■□□□□ 0.77
LCA5L-202ENST00000358268 PABPN1Q86U42 306 aaKnown RBP eCLIP19.78■□□□□ 0.76
LCA5L-202ENST00000358268 EIF4G1Q04637 1599 aaKnown RBP19.77■□□□□ 0.76
LCA5L-202ENST00000358268 CECR2Q9BXF3 1484 aa19.76■□□□□ 0.75
LCA5L-202ENST00000358268 SCRIBQ14160 1630 aa19.48■□□□□ 0.71
LCA5L-202ENST00000358268 DCAF8L2P0C7V8 631 aa19.44■□□□□ 0.7
LCA5L-202ENST00000358268 CUX2O14529 1486 aa19.42■□□□□ 0.7
LCA5L-202ENST00000358268 DNAJC5Q9H3Z4 198 aa19.4■□□□□ 0.7
LCA5L-202ENST00000358268 AEBP2Q6ZN18 517 aaPredicted RBP19.36■□□□□ 0.69
LCA5L-202ENST00000358268 NCAPD3P42695 1498 aa19.12■□□□□ 0.65
LCA5L-202ENST00000358268 HMGXB3Q12766 1538 aa19.11■□□□□ 0.65
LCA5L-202ENST00000358268 SMARCA2P51531 1590 aa19.02■□□□□ 0.64
LCA5L-202ENST00000358268 PEG3Q9GZU2 1588 aa18.93■□□□□ 0.62
LCA5L-202ENST00000358268 ERCC6Q03468 1493 aa18.88■□□□□ 0.61
LCA5L-202ENST00000358268 LAMC3Q9Y6N6 1575 aa18.87■□□□□ 0.61
LCA5L-202ENST00000358268 ATAD2BQ9ULI0 1458 aa18.85■□□□□ 0.61
LCA5L-202ENST00000358268 SMARCA4P51532 1647 aa18.84■□□□□ 0.61
LCA5L-202ENST00000358268 THOC2Q8NI27 1593 aaKnown RBP18.84■□□□□ 0.61
LCA5L-202ENST00000358268 BAZ1AQ9NRL2 1556 aaPredicted RBP18.76■□□□□ 0.59
LCA5L-202ENST00000358268 BAZ1BQ9UIG0 1483 aaKnown RBP18.63■□□□□ 0.57
LCA5L-202ENST00000358268 PDS5BQ9NTI5 1447 aa18.59■□□□□ 0.57
LCA5L-202ENST00000358268 CHIC1Q5VXU3 224 aa18.56■□□□□ 0.56
LCA5L-202ENST00000358268 KIF21AQ7Z4S6 1674 aa18.55■□□□□ 0.56
LCA5L-202ENST00000358268 WDR62O43379 1518 aa18.53■□□□□ 0.56
LCA5L-202ENST00000358268 MRC2Q9UBG0 1479 aa18.47■□□□□ 0.55
LCA5L-202ENST00000358268 NESP48681 1621 aa18.45■□□□□ 0.54
LCA5L-202ENST00000358268 PRDM2Q13029 1718 aa18.35■□□□□ 0.53
LCA5L-202ENST00000358268 CADPSQ9ULU8 1353 aa18.34■□□□□ 0.53
LCA5L-202ENST00000358268 CEP164Q9UPV0 1460 aa18.25■□□□□ 0.51
LCA5L-202ENST00000358268 MROH2BQ7Z745 1585 aa18.25■□□□□ 0.51
LCA5L-202ENST00000358268 CFTRP13569 1480 aa18.15■□□□□ 0.5
LCA5L-202ENST00000358268 FANCD2Q9BXW9 1451 aa18.1■□□□□ 0.49
LCA5L-202ENST00000358268 TOP2AP11388 1531 aaKnown RBP18.07■□□□□ 0.48
LCA5L-202ENST00000358268 WDR97A6NE52 1622 aa18.06■□□□□ 0.48
LCA5L-202ENST00000358268 ABCC8Q09428 1581 aa18.05■□□□□ 0.48
LCA5L-202ENST00000358268 WIZO95785 1651 aa18.02■□□□□ 0.47
LCA5L-202ENST00000358268 IFT140Q96RY7 1462 aa18.01■□□□□ 0.47
LCA5L-202ENST00000358268 OSCARQ8IYS5 282 aa18■□□□□ 0.47
LCA5L-202ENST00000358268 RIMBP3CA6NJZ7 1639 aa18■□□□□ 0.47
LCA5L-202ENST00000358268 RIMBP3BA6NNM3 1639 aa18■□□□□ 0.47
LCA5L-202ENST00000358268 RIMBP3Q9UFD9 1639 aa18■□□□□ 0.47
LCA5L-202ENST00000358268 URB2Q14146 1524 aaKnown RBP17.95■□□□□ 0.46
LCA5L-202ENST00000358268 TRIM41Q8WV44 630 aa17.89■□□□□ 0.46
LCA5L-202ENST00000358268 RSF1Q96T23 1441 aaPredicted RBP17.88■□□□□ 0.45
LCA5L-202ENST00000358268 ARHGEF11O15085 1522 aa17.85■□□□□ 0.45
LCA5L-202ENST00000358268 DNMBPQ6XZF7 1577 aa17.84■□□□□ 0.45
LCA5L-202ENST00000358268 EIF4G3O43432 1585 aaKnown RBP17.8■□□□□ 0.44
LCA5L-202ENST00000358268 TOPBP1Q92547 1522 aa17.77■□□□□ 0.43
LCA5L-202ENST00000358268 TARBP1Q13395 1621 aaKnown RBP17.75■□□□□ 0.43
LCA5L-202ENST00000358268 CHD1O14646 1710 aa17.75■□□□□ 0.43
LCA5L-202ENST00000358268 CLASP1Q7Z460 1538 aa17.66■□□□□ 0.42
LCA5L-202ENST00000358268 SYNJ1O43426 1573 aa17.62■□□□□ 0.41
LCA5L-202ENST00000358268 ARAP1Q96P48 1450 aa17.61■□□□□ 0.41
LCA5L-202ENST00000358268 ZNF608Q9ULD9 1512 aaPredicted RBP17.61■□□□□ 0.41
LCA5L-202ENST00000358268 MAGI1Q96QZ7 1491 aaPredicted RBP17.6■□□□□ 0.41
LCA5L-202ENST00000358268 CCDC88BA6NC98 1476 aa17.57■□□□□ 0.4
LCA5L-202ENST00000358268 POLA1P09884 1462 aaPredicted RBP17.5■□□□□ 0.39
LCA5L-202ENST00000358268 PBRM1Q86U86 1689 aa17.44■□□□□ 0.38
LCA5L-202ENST00000358268 SYNJ2O15056 1496 aa17.43■□□□□ 0.38
LCA5L-202ENST00000358268 GRIN2BQ13224 1484 aa17.43■□□□□ 0.38
LCA5L-202ENST00000358268 SNAPC4Q5SXM2 1469 aa17.36■□□□□ 0.37
LCA5L-202ENST00000358268 ABCA5Q8WWZ7 1642 aa17.36■□□□□ 0.37
LCA5L-202ENST00000358268 SOGA1O94964 1423 aa17.34■□□□□ 0.37
LCA5L-202ENST00000358268 AQRO60306 1485 aaKnown RBP eCLIP17.34■□□□□ 0.37
LCA5L-202ENST00000358268 SHROOM2Q13796 1616 aa17.34■□□□□ 0.37
LCA5L-202ENST00000358268 FGD5Q6ZNL6 1462 aa17.3■□□□□ 0.36
LCA5L-202ENST00000358268 ABCA10Q8WWZ4 1543 aa17.3■□□□□ 0.36
LCA5L-202ENST00000358268 CYB5RLQ6IPT4 315 aa17.28■□□□□ 0.36
LCA5L-202ENST00000358268 GAPVD1Q14C86 1478 aa17.26■□□□□ 0.35
LCA5L-202ENST00000358268 CUX1P39880 1505 aa17.25■□□□□ 0.35
LCA5L-202ENST00000358268 ADAMTS12P58397 1594 aa17.22■□□□□ 0.35
LCA5L-202ENST00000358268 NUP160Q12769 1436 aa17.21■□□□□ 0.35
LCA5L-202ENST00000358268 RAD54L2Q9Y4B4 1467 aa17.2■□□□□ 0.34
LCA5L-202ENST00000358268 BIVM-ERCC5R4GMW8 1640 aa17.19■□□□□ 0.34
LCA5L-202ENST00000358268 TRHP20396 242 aaPredicted RBP17.18■□□□□ 0.34
LCA5L-202ENST00000358268 ERICH3Q5RHP9 1530 aa17.17■□□□□ 0.34
LCA5L-202ENST00000358268 KIF13AQ9H1H9 1805 aa17.16■□□□□ 0.34
LCA5L-202ENST00000358268 GRIN2AQ12879 1464 aa17.15■□□□□ 0.34
LCA5L-202ENST00000358268 CEP170Q5SW79 1584 aa17.14■□□□□ 0.33
LCA5L-202ENST00000358268 CHMP7Q8WUX9 453 aaPredicted RBP17.13■□□□□ 0.33
LCA5L-202ENST00000358268 MAPKBP1O60336 1514 aa17.12■□□□□ 0.33
LCA5L-202ENST00000358268 TDRD9Q8NDG6 1382 aaKnown RBP17.11■□□□□ 0.33
LCA5L-202ENST00000358268 FHAD1B1AJZ9 1412 aa17.08■□□□□ 0.33
LCA5L-202ENST00000358268 TOP2BQ02880 1626 aa17.07■□□□□ 0.32
LCA5L-202ENST00000358268 FBLN2P98095 1184 aa17.01■□□□□ 0.31
LCA5L-202ENST00000358268 WRNQ14191 1432 aaPredicted RBP eCLIP17.01■□□□□ 0.31
LCA5L-202ENST00000358268 ABCC10Q5T3U5 1492 aa16.98■□□□□ 0.31
LCA5L-202ENST00000358268 RUSC2Q8N2Y8 1516 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms