RNA–Protein interactions for RNA: ENST00000357790.5

RPLP1-202, Transcript of ribosomal protein lateral stalk subunit P1, humanhuman

TSL 2 BASIC

Gene RPLP1, Length 445 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPLP1-202ENST00000357790 NISCHQ9Y2I1 1504 aa32.06■■■□□ 2.72
RPLP1-202ENST00000357790 CCDC180Q9P1Z9 1646 aa28.55■■■□□ 2.16
RPLP1-202ENST00000357790 ABCC9O60706 1549 aa27.82■■■□□ 2.04
RPLP1-202ENST00000357790 RB1CC1Q8TDY2 1594 aa26.81■■□□□ 1.88
RPLP1-202ENST00000357790 NACADO15069 1562 aa26.78■■□□□ 1.88
RPLP1-202ENST00000357790 ZCCHC6Q5VYS8 1495 aaKnown RBP26.75■■□□□ 1.87
RPLP1-202ENST00000357790 DCAF8L2P0C7V8 631 aa26.65■■□□□ 1.86
RPLP1-202ENST00000357790 MYO15BQ96JP2 1530 aa26.63■■□□□ 1.85
RPLP1-202ENST00000357790 DCAF1Q9Y4B6 1507 aa26.55■■□□□ 1.84
RPLP1-202ENST00000357790 UNC13AQ9UPW8 1703 aa26.25■■□□□ 1.79
RPLP1-202ENST00000357790 SCRIBQ14160 1630 aa26.05■■□□□ 1.76
RPLP1-202ENST00000357790 BICRAQ9NZM4 1560 aa26■■□□□ 1.75
RPLP1-202ENST00000357790 PABPN1Q86U42 306 aaKnown RBP eCLIP25.94■■□□□ 1.74
RPLP1-202ENST00000357790 SHROOM4Q9ULL8 1493 aa25.74■■□□□ 1.71
RPLP1-202ENST00000357790 DNAJC5BQ9UF47 199 aa25.41■■□□□ 1.66
RPLP1-202ENST00000357790 EIF4G1Q04637 1599 aaKnown RBP25.32■■□□□ 1.64
RPLP1-202ENST00000357790 CC2D2AQ9P2K1 1620 aa25.19■■□□□ 1.62
RPLP1-202ENST00000357790 CECR2Q9BXF3 1484 aa24.99■■□□□ 1.59
RPLP1-202ENST00000357790 SMARCA4P51532 1647 aa24.9■■□□□ 1.58
RPLP1-202ENST00000357790 BAZ1AQ9NRL2 1556 aaPredicted RBP24.87■■□□□ 1.57
RPLP1-202ENST00000357790 MROH2BQ7Z745 1585 aa24.71■■□□□ 1.55
RPLP1-202ENST00000357790 ATAD2BQ9ULI0 1458 aa24.71■■□□□ 1.55
RPLP1-202ENST00000357790 SMARCA2P51531 1590 aa24.71■■□□□ 1.55
RPLP1-202ENST00000357790 NCAPD3P42695 1498 aa24.67■■□□□ 1.54
RPLP1-202ENST00000357790 PEG3Q9GZU2 1588 aa24.66■■□□□ 1.54
RPLP1-202ENST00000357790 HMGXB3Q12766 1538 aa24.62■■□□□ 1.53
RPLP1-202ENST00000357790 BAZ1BQ9UIG0 1483 aaKnown RBP24.53■■□□□ 1.52
RPLP1-202ENST00000357790 WIZO95785 1651 aa24.47■■□□□ 1.51
RPLP1-202ENST00000357790 RSF1Q96T23 1441 aaPredicted RBP24.42■■□□□ 1.5
RPLP1-202ENST00000357790 TOP2AP11388 1531 aaKnown RBP24.23■■□□□ 1.47
RPLP1-202ENST00000357790 NESP48681 1621 aa24.1■■□□□ 1.45
RPLP1-202ENST00000357790 LAMC3Q9Y6N6 1575 aa24.07■■□□□ 1.44
RPLP1-202ENST00000357790 ERCC6Q03468 1493 aa23.99■■□□□ 1.43
RPLP1-202ENST00000357790 CADPSQ9ULU8 1353 aa23.93■■□□□ 1.42
RPLP1-202ENST00000357790 CCDC88BA6NC98 1476 aa23.89■■□□□ 1.42
RPLP1-202ENST00000357790 KIF21AQ7Z4S6 1674 aa23.87■■□□□ 1.41
RPLP1-202ENST00000357790 PDS5BQ9NTI5 1447 aa23.84■■□□□ 1.41
RPLP1-202ENST00000357790 CFTRP13569 1480 aa23.84■■□□□ 1.41
RPLP1-202ENST00000357790 THOC2Q8NI27 1593 aaKnown RBP23.78■■□□□ 1.4
RPLP1-202ENST00000357790 SUPT5HO00267 1087 aaKnown RBP23.78■■□□□ 1.4
RPLP1-202ENST00000357790 PRDM2Q13029 1718 aa23.76■■□□□ 1.39
RPLP1-202ENST00000357790 CUX2O14529 1486 aa23.71■■□□□ 1.39
RPLP1-202ENST00000357790 FANCD2Q9BXW9 1451 aa23.71■■□□□ 1.39
RPLP1-202ENST00000357790 CEP164Q9UPV0 1460 aa23.69■■□□□ 1.38
RPLP1-202ENST00000357790 MRC2Q9UBG0 1479 aa23.65■■□□□ 1.38
RPLP1-202ENST00000357790 WDR62O43379 1518 aa23.59■■□□□ 1.37
RPLP1-202ENST00000357790 URB2Q14146 1524 aaKnown RBP23.48■■□□□ 1.35
RPLP1-202ENST00000357790 DNMBPQ6XZF7 1577 aa23.35■■□□□ 1.33
RPLP1-202ENST00000357790 TOPBP1Q92547 1522 aa23.34■■□□□ 1.33
RPLP1-202ENST00000357790 ABCC8Q09428 1581 aa23.31■■□□□ 1.32
RPLP1-202ENST00000357790 CUX1P39880 1505 aa23.19■■□□□ 1.3
RPLP1-202ENST00000357790 IFT140Q96RY7 1462 aa23.17■■□□□ 1.3
RPLP1-202ENST00000357790 POLA1P09884 1462 aaPredicted RBP23.15■■□□□ 1.3
RPLP1-202ENST00000357790 TARBP1Q13395 1621 aaKnown RBP23.11■■□□□ 1.29
RPLP1-202ENST00000357790 FGD5Q6ZNL6 1462 aa23.11■■□□□ 1.29
RPLP1-202ENST00000357790 ZNF608Q9ULD9 1512 aaPredicted RBP23.07■■□□□ 1.28
RPLP1-202ENST00000357790 EIF4G3O43432 1585 aaKnown RBP23.06■■□□□ 1.28
RPLP1-202ENST00000357790 BIVM-ERCC5R4GMW8 1640 aa23.04■■□□□ 1.28
RPLP1-202ENST00000357790 WRNQ14191 1432 aaPredicted RBP eCLIP23.04■■□□□ 1.28
RPLP1-202ENST00000357790 SYNJ1O43426 1573 aa23.03■■□□□ 1.28
RPLP1-202ENST00000357790 RAD54L2Q9Y4B4 1467 aa23.03■■□□□ 1.28
RPLP1-202ENST00000357790 TOP2BQ02880 1626 aa23.02■■□□□ 1.28
RPLP1-202ENST00000357790 SOGA1O94964 1423 aa23.01■■□□□ 1.27
RPLP1-202ENST00000357790 WDR97A6NE52 1622 aa22.98■■□□□ 1.27
RPLP1-202ENST00000357790 AQRO60306 1485 aaKnown RBP eCLIP22.92■■□□□ 1.264e-7■■■□□ 18.8
RPLP1-202ENST00000357790 ABCA10Q8WWZ4 1543 aa22.87■■□□□ 1.25
RPLP1-202ENST00000357790 TDRD9Q8NDG6 1382 aaKnown RBP22.87■■□□□ 1.25
RPLP1-202ENST00000357790 ABCA5Q8WWZ7 1642 aa22.84■■□□□ 1.25
RPLP1-202ENST00000357790 DNAJC5Q9H3Z4 198 aa22.83■■□□□ 1.25
RPLP1-202ENST00000357790 PBRM1Q86U86 1689 aa22.81■■□□□ 1.24
RPLP1-202ENST00000357790 GRIN2BQ13224 1484 aa22.77■■□□□ 1.24
RPLP1-202ENST00000357790 GAPVD1Q14C86 1478 aa22.77■■□□□ 1.24
RPLP1-202ENST00000357790 SNAPC4Q5SXM2 1469 aa22.76■■□□□ 1.23
RPLP1-202ENST00000357790 CHD1O14646 1710 aa22.74■■□□□ 1.23
RPLP1-202ENST00000357790 MAGI1Q96QZ7 1491 aaPredicted RBP22.72■■□□□ 1.23
RPLP1-202ENST00000357790 SYNJ2O15056 1496 aa22.63■■□□□ 1.21
RPLP1-202ENST00000357790 OSCARQ8IYS5 282 aa22.63■■□□□ 1.21
RPLP1-202ENST00000357790 ADAMTS12P58397 1594 aa22.62■■□□□ 1.21
RPLP1-202ENST00000357790 ERICH3Q5RHP9 1530 aa22.61■■□□□ 1.21
RPLP1-202ENST00000357790 FBLN2P98095 1184 aa22.59■■□□□ 1.21
RPLP1-202ENST00000357790 KIF27Q86VH2 1401 aa22.54■■□□□ 1.2
RPLP1-202ENST00000357790 CHMP7Q8WUX9 453 aaPredicted RBP22.53■■□□□ 1.2
RPLP1-202ENST00000357790 FHAD1B1AJZ9 1412 aa22.5■■□□□ 1.19
RPLP1-202ENST00000357790 GRIN2AQ12879 1464 aa22.5■■□□□ 1.19
RPLP1-202ENST00000357790 CLASP1Q7Z460 1538 aa22.48■■□□□ 1.19
RPLP1-202ENST00000357790 TRIM41Q8WV44 630 aa22.46■■□□□ 1.19
RPLP1-202ENST00000357790 CUL7Q14999 1698 aa22.46■■□□□ 1.19
RPLP1-202ENST00000357790 CEP170Q5SW79 1584 aa22.41■■□□□ 1.18
RPLP1-202ENST00000357790 IGF1RP08069 1367 aa22.4■■□□□ 1.18
RPLP1-202ENST00000357790 RIMBP3CA6NJZ7 1639 aa22.4■■□□□ 1.18
RPLP1-202ENST00000357790 RIMBP3BA6NNM3 1639 aa22.4■■□□□ 1.18
RPLP1-202ENST00000357790 RIMBP3Q9UFD9 1639 aa22.4■■□□□ 1.18
RPLP1-202ENST00000357790 ARHGEF11O15085 1522 aa22.39■■□□□ 1.17
RPLP1-202ENST00000357790 NUP160Q12769 1436 aa22.38■■□□□ 1.17
RPLP1-202ENST00000357790 RUSC2Q8N2Y8 1516 aa22.36■■□□□ 1.17
RPLP1-202ENST00000357790 CARMIL1Q5VZK9 1371 aa22.27■■□□□ 1.16
RPLP1-202ENST00000357790 SHROOM2Q13796 1616 aa22.24■■□□□ 1.15
RPLP1-202ENST00000357790 ARAP1Q96P48 1450 aa22.21■■□□□ 1.15
RPLP1-202ENST00000357790 CHIC1Q5VXU3 224 aa22.2■■□□□ 1.14
RPLP1-202ENST00000357790 RAPGEF2Q9Y4G8 1499 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms