RNA–Protein interactions for RNA: ENST00000357490.6

COPS7B-202, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-202ENST00000357490 NISCHQ9Y2I1 1504 aa38.62■■■■□ 3.77
COPS7B-202ENST00000357490 CCDC180Q9P1Z9 1646 aa34.7■■■■□ 3.15
COPS7B-202ENST00000357490 ABCC9O60706 1549 aa34.37■■■■□ 3.09
COPS7B-202ENST00000357490 RB1CC1Q8TDY2 1594 aa32.9■■■□□ 2.86
COPS7B-202ENST00000357490 NACADO15069 1562 aa32.71■■■□□ 2.83
COPS7B-202ENST00000357490 DCAF8L2P0C7V8 631 aa32.44■■■□□ 2.78
COPS7B-202ENST00000357490 MYO15BQ96JP2 1530 aa32.33■■■□□ 2.77
COPS7B-202ENST00000357490 UNC13AQ9UPW8 1703 aa32.21■■■□□ 2.75
COPS7B-202ENST00000357490 ZCCHC6Q5VYS8 1495 aaKnown RBP32.09■■■□□ 2.73
COPS7B-202ENST00000357490 DNAJC5BQ9UF47 199 aa31.99■■■□□ 2.71
COPS7B-202ENST00000357490 DCAF1Q9Y4B6 1507 aa31.96■■■□□ 2.71
COPS7B-202ENST00000357490 PABPN1Q86U42 306 aaKnown RBP eCLIP31.96■■■□□ 2.71
COPS7B-202ENST00000357490 BICRAQ9NZM4 1560 aa31.87■■■□□ 2.69
COPS7B-202ENST00000357490 SHROOM4Q9ULL8 1493 aa31.56■■■□□ 2.64
COPS7B-202ENST00000357490 SCRIBQ14160 1630 aa31.53■■■□□ 2.64
COPS7B-202ENST00000357490 CC2D2AQ9P2K1 1620 aa31.13■■■□□ 2.57
COPS7B-202ENST00000357490 EIF4G1Q04637 1599 aaKnown RBP31.09■■■□□ 2.57
COPS7B-202ENST00000357490 CECR2Q9BXF3 1484 aa30.97■■■□□ 2.55
COPS7B-202ENST00000357490 NCAPD3P42695 1498 aa30.13■■■□□ 2.41
COPS7B-202ENST00000357490 SMARCA4P51532 1647 aa30.12■■■□□ 2.41
COPS7B-202ENST00000357490 SMARCA2P51531 1590 aa30.07■■■□□ 2.4
COPS7B-202ENST00000357490 ATAD2BQ9ULI0 1458 aa30.05■■■□□ 2.4
COPS7B-202ENST00000357490 BAZ1AQ9NRL2 1556 aaPredicted RBP30.01■■■□□ 2.39
COPS7B-202ENST00000357490 HMGXB3Q12766 1538 aa29.99■■■□□ 2.39
COPS7B-202ENST00000357490 PEG3Q9GZU2 1588 aa29.85■■■□□ 2.37
COPS7B-202ENST00000357490 BAZ1BQ9UIG0 1483 aaKnown RBP29.81■■■□□ 2.36
COPS7B-202ENST00000357490 ERCC6Q03468 1493 aa29.73■■■□□ 2.35
COPS7B-202ENST00000357490 MROH2BQ7Z745 1585 aa29.72■■■□□ 2.35
COPS7B-202ENST00000357490 CUX2O14529 1486 aa29.63■■■□□ 2.33
COPS7B-202ENST00000357490 NESP48681 1621 aa29.56■■■□□ 2.32
COPS7B-202ENST00000357490 LAMC3Q9Y6N6 1575 aa29.5■■■□□ 2.31
COPS7B-202ENST00000357490 RSF1Q96T23 1441 aaPredicted RBP29.44■■■□□ 2.3
COPS7B-202ENST00000357490 WIZO95785 1651 aa29.41■■■□□ 2.3
COPS7B-202ENST00000357490 DNAJC5Q9H3Z4 198 aa29.35■■■□□ 2.29
COPS7B-202ENST00000357490 THOC2Q8NI27 1593 aaKnown RBP29.31■■■□□ 2.28
COPS7B-202ENST00000357490 KIF21AQ7Z4S6 1674 aa29.31■■■□□ 2.28
COPS7B-202ENST00000357490 PDS5BQ9NTI5 1447 aa29.28■■■□□ 2.28
COPS7B-202ENST00000357490 CADPSQ9ULU8 1353 aa29.21■■■□□ 2.27
COPS7B-202ENST00000357490 TOP2AP11388 1531 aaKnown RBP29.07■■■□□ 2.24
COPS7B-202ENST00000357490 MRC2Q9UBG0 1479 aa29.01■■■□□ 2.23
COPS7B-202ENST00000357490 SUPT5HO00267 1087 aaKnown RBP28.98■■■□□ 2.23
COPS7B-202ENST00000357490 WDR62O43379 1518 aa28.94■■■□□ 2.22
COPS7B-202ENST00000357490 CEP164Q9UPV0 1460 aa28.94■■■□□ 2.22
COPS7B-202ENST00000357490 CFTRP13569 1480 aa28.93■■■□□ 2.22
COPS7B-202ENST00000357490 FANCD2Q9BXW9 1451 aa28.9■■■□□ 2.22
COPS7B-202ENST00000357490 PRDM2Q13029 1718 aa28.84■■■□□ 2.21
COPS7B-202ENST00000357490 CCDC88BA6NC98 1476 aa28.73■■■□□ 2.19
COPS7B-202ENST00000357490 URB2Q14146 1524 aaKnown RBP28.63■■■□□ 2.17
COPS7B-202ENST00000357490 ABCC8Q09428 1581 aa28.4■■■□□ 2.14
COPS7B-202ENST00000357490 TOPBP1Q92547 1522 aa28.38■■■□□ 2.13
COPS7B-202ENST00000357490 IFT140Q96RY7 1462 aa28.35■■■□□ 2.13
COPS7B-202ENST00000357490 DNMBPQ6XZF7 1577 aa28.33■■■□□ 2.12
COPS7B-202ENST00000357490 OSCARQ8IYS5 282 aa28.26■■■□□ 2.11
COPS7B-202ENST00000357490 ZNF608Q9ULD9 1512 aaPredicted RBP28.23■■■□□ 2.11
COPS7B-202ENST00000357490 EIF4G3O43432 1585 aaKnown RBP28.16■■■□□ 2.1
COPS7B-202ENST00000357490 TARBP1Q13395 1621 aaKnown RBP28.14■■■□□ 2.09
COPS7B-202ENST00000357490 TRIM41Q8WV44 630 aa28.1■■■□□ 2.09
COPS7B-202ENST00000357490 POLA1P09884 1462 aaPredicted RBP28.08■■■□□ 2.09
COPS7B-202ENST00000357490 AQRO60306 1485 aaKnown RBP eCLIP27.99■■■□□ 2.07
COPS7B-202ENST00000357490 CHD1O14646 1710 aa27.97■■■□□ 2.07
COPS7B-202ENST00000357490 WDR97A6NE52 1622 aa27.95■■■□□ 2.06
COPS7B-202ENST00000357490 SOGA1O94964 1423 aa27.94■■■□□ 2.06
COPS7B-202ENST00000357490 CUX1P39880 1505 aa27.93■■■□□ 2.06
COPS7B-202ENST00000357490 FGD5Q6ZNL6 1462 aa27.93■■■□□ 2.06
COPS7B-202ENST00000357490 RAD54L2Q9Y4B4 1467 aa27.93■■■□□ 2.06
COPS7B-202ENST00000357490 RIMBP3CA6NJZ7 1639 aa27.92■■■□□ 2.06
COPS7B-202ENST00000357490 RIMBP3BA6NNM3 1639 aa27.92■■■□□ 2.06
COPS7B-202ENST00000357490 RIMBP3Q9UFD9 1639 aa27.92■■■□□ 2.06
COPS7B-202ENST00000357490 TDRD9Q8NDG6 1382 aaKnown RBP27.84■■■□□ 2.05
COPS7B-202ENST00000357490 ARHGEF11O15085 1522 aa27.82■■■□□ 2.04
COPS7B-202ENST00000357490 FBLN2P98095 1184 aa27.78■■■□□ 2.04
COPS7B-202ENST00000357490 SNAPC4Q5SXM2 1469 aa27.74■■■□□ 2.03
COPS7B-202ENST00000357490 WRNQ14191 1432 aaPredicted RBP eCLIP27.74■■■□□ 2.03
COPS7B-202ENST00000357490 MAGI1Q96QZ7 1491 aaPredicted RBP27.73■■■□□ 2.03
COPS7B-202ENST00000357490 GRIN2BQ13224 1484 aa27.72■■■□□ 2.03
COPS7B-202ENST00000357490 PBRM1Q86U86 1689 aa27.71■■■□□ 2.03
COPS7B-202ENST00000357490 SYNJ1O43426 1573 aa27.66■■■□□ 2.02
COPS7B-202ENST00000357490 ABCA10Q8WWZ4 1543 aa27.65■■■□□ 2.02
COPS7B-202ENST00000357490 GAPVD1Q14C86 1478 aa27.64■■■□□ 2.02
COPS7B-202ENST00000357490 CHMP7Q8WUX9 453 aaPredicted RBP27.63■■■□□ 2.01
COPS7B-202ENST00000357490 TOP2BQ02880 1626 aa27.63■■■□□ 2.01
COPS7B-202ENST00000357490 ABCA5Q8WWZ7 1642 aa27.62■■■□□ 2.01
COPS7B-202ENST00000357490 SYNJ2O15056 1496 aa27.62■■■□□ 2.01
COPS7B-202ENST00000357490 BIVM-ERCC5R4GMW8 1640 aa27.61■■■□□ 2.01
COPS7B-202ENST00000357490 CLASP1Q7Z460 1538 aa27.58■■■□□ 2.01
COPS7B-202ENST00000357490 CYB5RLQ6IPT4 315 aa27.55■■■□□ 2
COPS7B-202ENST00000357490 ARAP1Q96P48 1450 aa27.53■■■□□ 2
COPS7B-202ENST00000357490 ADAMTS12P58397 1594 aa27.39■■□□□ 1.98
COPS7B-202ENST00000357490 GRIN2AQ12879 1464 aa27.36■■□□□ 1.97
COPS7B-202ENST00000357490 ERICH3Q5RHP9 1530 aa27.34■■□□□ 1.97
COPS7B-202ENST00000357490 FHAD1B1AJZ9 1412 aa27.29■■□□□ 1.96
COPS7B-202ENST00000357490 CEP170Q5SW79 1584 aa27.25■■□□□ 1.95
COPS7B-202ENST00000357490 NUP160Q12769 1436 aa27.24■■□□□ 1.95
COPS7B-202ENST00000357490 TRHP20396 242 aaPredicted RBP27.21■■□□□ 1.95
COPS7B-202ENST00000357490 CHIC1Q5VXU3 224 aa27.21■■□□□ 1.95
COPS7B-202ENST00000357490 SHROOM2Q13796 1616 aa27.17■■□□□ 1.94
COPS7B-202ENST00000357490 KIF27Q86VH2 1401 aa27.12■■□□□ 1.93
COPS7B-202ENST00000357490 ERCC6L2Q5T890 1561 aa27.11■■□□□ 1.93
COPS7B-202ENST00000357490 RUSC2Q8N2Y8 1516 aa27.04■■□□□ 1.92
COPS7B-202ENST00000357490 CUL7Q14999 1698 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms