RNA–Protein interactions for RNA: ENST00000357183.8

RAET1E-201, retinoic acid early transcript 1E, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAET1E, Length 958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAET1E-201ENST00000357183 NISCHQ9Y2I1 1504 aa22.82■■□□□ 1.24
RAET1E-201ENST00000357183 ABCC9O60706 1549 aa20.81■□□□□ 0.92
RAET1E-201ENST00000357183 CCDC180Q9P1Z9 1646 aa20.56■□□□□ 0.88
RAET1E-201ENST00000357183 DNAJC5BQ9UF47 199 aa19.69■□□□□ 0.74
RAET1E-201ENST00000357183 RB1CC1Q8TDY2 1594 aa19.66■□□□□ 0.74
RAET1E-201ENST00000357183 NACADO15069 1562 aa19.44■□□□□ 0.7
RAET1E-201ENST00000357183 DCAF8L2P0C7V8 631 aa19.39■□□□□ 0.69
RAET1E-201ENST00000357183 UNC13AQ9UPW8 1703 aa19.36■□□□□ 0.69
RAET1E-201ENST00000357183 PABPN1Q86U42 306 aaKnown RBP eCLIP19.34■□□□□ 0.69
RAET1E-201ENST00000357183 BICRAQ9NZM4 1560 aa19.15■□□□□ 0.66
RAET1E-201ENST00000357183 MYO15BQ96JP2 1530 aa19.05■□□□□ 0.64
RAET1E-201ENST00000357183 ZCCHC6Q5VYS8 1495 aaKnown RBP18.87■□□□□ 0.61
RAET1E-201ENST00000357183 SCRIBQ14160 1630 aa18.82■□□□□ 0.6
RAET1E-201ENST00000357183 CC2D2AQ9P2K1 1620 aa18.78■□□□□ 0.6
RAET1E-201ENST00000357183 DCAF1Q9Y4B6 1507 aa18.76■□□□□ 0.59
RAET1E-201ENST00000357183 CECR2Q9BXF3 1484 aa18.71■□□□□ 0.59
RAET1E-201ENST00000357183 SHROOM4Q9ULL8 1493 aa18.71■□□□□ 0.59
RAET1E-201ENST00000357183 EIF4G1Q04637 1599 aaKnown RBP18.67■□□□□ 0.58
RAET1E-201ENST00000357183 DNAJC5Q9H3Z4 198 aa18.12■□□□□ 0.49
RAET1E-201ENST00000357183 NCAPD3P42695 1498 aa17.94■□□□□ 0.46
RAET1E-201ENST00000357183 ERCC6Q03468 1493 aa17.94■□□□□ 0.46
RAET1E-201ENST00000357183 CUX2O14529 1486 aa17.91■□□□□ 0.46
RAET1E-201ENST00000357183 ATAD2BQ9ULI0 1458 aa17.9■□□□□ 0.46
RAET1E-201ENST00000357183 SMARCA4P51532 1647 aa17.88■□□□□ 0.45
RAET1E-201ENST00000357183 NESP48681 1621 aa17.84■□□□□ 0.45
RAET1E-201ENST00000357183 SMARCA2P51531 1590 aa17.82■□□□□ 0.44
RAET1E-201ENST00000357183 HMGXB3Q12766 1538 aa17.81■□□□□ 0.44
RAET1E-201ENST00000357183 BAZ1BQ9UIG0 1483 aaKnown RBP17.72■□□□□ 0.43
RAET1E-201ENST00000357183 BAZ1AQ9NRL2 1556 aaPredicted RBP17.7■□□□□ 0.42
RAET1E-201ENST00000357183 THOC2Q8NI27 1593 aaKnown RBP17.68■□□□□ 0.42
RAET1E-201ENST00000357183 KIF21AQ7Z4S6 1674 aa17.64■□□□□ 0.41
RAET1E-201ENST00000357183 MROH2BQ7Z745 1585 aa17.63■□□□□ 0.41
RAET1E-201ENST00000357183 PEG3Q9GZU2 1588 aa17.63■□□□□ 0.41
RAET1E-201ENST00000357183 LAMC3Q9Y6N6 1575 aa17.6■□□□□ 0.41
RAET1E-201ENST00000357183 PDS5BQ9NTI5 1447 aa17.47■□□□□ 0.39
RAET1E-201ENST00000357183 WIZO95785 1651 aa17.45■□□□□ 0.38
RAET1E-201ENST00000357183 CADPSQ9ULU8 1353 aa17.4■□□□□ 0.38
RAET1E-201ENST00000357183 MRC2Q9UBG0 1479 aa17.37■□□□□ 0.37
RAET1E-201ENST00000357183 TRIM41Q8WV44 630 aa17.35■□□□□ 0.37
RAET1E-201ENST00000357183 WDR62O43379 1518 aa17.35■□□□□ 0.37
RAET1E-201ENST00000357183 CEP164Q9UPV0 1460 aa17.27■□□□□ 0.36
RAET1E-201ENST00000357183 FANCD2Q9BXW9 1451 aa17.24■□□□□ 0.35
RAET1E-201ENST00000357183 CFTRP13569 1480 aa17.16■□□□□ 0.34
RAET1E-201ENST00000357183 RSF1Q96T23 1441 aaPredicted RBP17.14■□□□□ 0.33
RAET1E-201ENST00000357183 TOP2AP11388 1531 aaKnown RBP17.14■□□□□ 0.33
RAET1E-201ENST00000357183 URB2Q14146 1524 aaKnown RBP17.14■□□□□ 0.33
RAET1E-201ENST00000357183 PRDM2Q13029 1718 aa17.09■□□□□ 0.33
RAET1E-201ENST00000357183 OSCARQ8IYS5 282 aa17.05■□□□□ 0.32
RAET1E-201ENST00000357183 ZNF608Q9ULD9 1512 aaPredicted RBP16.98■□□□□ 0.31
RAET1E-201ENST00000357183 RIMBP3CA6NJZ7 1639 aa16.97■□□□□ 0.31
RAET1E-201ENST00000357183 RIMBP3BA6NNM3 1639 aa16.97■□□□□ 0.31
RAET1E-201ENST00000357183 RIMBP3Q9UFD9 1639 aa16.97■□□□□ 0.31
RAET1E-201ENST00000357183 CCDC88BA6NC98 1476 aa16.96■□□□□ 0.31
RAET1E-201ENST00000357183 TOPBP1Q92547 1522 aa16.91■□□□□ 0.3
RAET1E-201ENST00000357183 IFT140Q96RY7 1462 aa16.91■□□□□ 0.3
RAET1E-201ENST00000357183 EIF4G3O43432 1585 aaKnown RBP16.88■□□□□ 0.29
RAET1E-201ENST00000357183 ARHGEF11O15085 1522 aa16.85■□□□□ 0.29
RAET1E-201ENST00000357183 CHD1O14646 1710 aa16.84■□□□□ 0.29
RAET1E-201ENST00000357183 DNMBPQ6XZF7 1577 aa16.82■□□□□ 0.28
RAET1E-201ENST00000357183 TARBP1Q13395 1621 aaKnown RBP16.78■□□□□ 0.28
RAET1E-201ENST00000357183 AQRO60306 1485 aaKnown RBP eCLIP16.78■□□□□ 0.28
RAET1E-201ENST00000357183 ABCC8Q09428 1581 aa16.77■□□□□ 0.27
RAET1E-201ENST00000357183 CYB5RLQ6IPT4 315 aa16.73■□□□□ 0.27
RAET1E-201ENST00000357183 POLA1P09884 1462 aaPredicted RBP16.71■□□□□ 0.27
RAET1E-201ENST00000357183 RAD54L2Q9Y4B4 1467 aa16.7■□□□□ 0.26
RAET1E-201ENST00000357183 FBLN2P98095 1184 aa16.7■□□□□ 0.26
RAET1E-201ENST00000357183 ARAP1Q96P48 1450 aa16.68■□□□□ 0.26
RAET1E-201ENST00000357183 SUPT5HO00267 1087 aaKnown RBP16.65■□□□□ 0.26
RAET1E-201ENST00000357183 TDRD9Q8NDG6 1382 aaKnown RBP16.64■□□□□ 0.25
RAET1E-201ENST00000357183 AEBP2Q6ZN18 517 aaPredicted RBP16.63■□□□□ 0.25
RAET1E-201ENST00000357183 SOGA1O94964 1423 aa16.62■□□□□ 0.25
RAET1E-201ENST00000357183 TRHP20396 242 aaPredicted RBP16.61■□□□□ 0.25
RAET1E-201ENST00000357183 SNAPC4Q5SXM2 1469 aa16.61■□□□□ 0.25
RAET1E-201ENST00000357183 FGD5Q6ZNL6 1462 aa16.6■□□□□ 0.25
RAET1E-201ENST00000357183 CUX1P39880 1505 aa16.57■□□□□ 0.24
RAET1E-201ENST00000357183 CLASP1Q7Z460 1538 aa16.56■□□□□ 0.24
RAET1E-201ENST00000357183 WDR97A6NE52 1622 aa16.53■□□□□ 0.24
RAET1E-201ENST00000357183 PBRM1Q86U86 1689 aa16.52■□□□□ 0.23
RAET1E-201ENST00000357183 SYNJ1O43426 1573 aa16.51■□□□□ 0.23
RAET1E-201ENST00000357183 MAGI1Q96QZ7 1491 aaPredicted RBP16.49■□□□□ 0.23
RAET1E-201ENST00000357183 CHMP7Q8WUX9 453 aaPredicted RBP16.49■□□□□ 0.23
RAET1E-201ENST00000357183 GRIN2BQ13224 1484 aa16.48■□□□□ 0.23
RAET1E-201ENST00000357183 SYNJ2O15056 1496 aa16.45■□□□□ 0.22
RAET1E-201ENST00000357183 GAPVD1Q14C86 1478 aa16.42■□□□□ 0.22
RAET1E-201ENST00000357183 ABCA5Q8WWZ7 1642 aa16.41■□□□□ 0.22
RAET1E-201ENST00000357183 ERCC6L2Q5T890 1561 aa16.37■□□□□ 0.21
RAET1E-201ENST00000357183 ABCA10Q8WWZ4 1543 aa16.36■□□□□ 0.21
RAET1E-201ENST00000357183 ADAMTS12P58397 1594 aa16.3■□□□□ 0.2
RAET1E-201ENST00000357183 CEP170Q5SW79 1584 aa16.3■□□□□ 0.2
RAET1E-201ENST00000357183 GRIN2AQ12879 1464 aa16.29■□□□□ 0.2
RAET1E-201ENST00000357183 BIVM-ERCC5R4GMW8 1640 aa16.25■□□□□ 0.19
RAET1E-201ENST00000357183 TOP2BQ02880 1626 aa16.23■□□□□ 0.19
RAET1E-201ENST00000357183 NUP160Q12769 1436 aa16.22■□□□□ 0.19
RAET1E-201ENST00000357183 WRNQ14191 1432 aaPredicted RBP eCLIP16.22■□□□□ 0.19
RAET1E-201ENST00000357183 SHROOM2Q13796 1616 aa16.21■□□□□ 0.19
RAET1E-201ENST00000357183 FHAD1B1AJZ9 1412 aa16.18■□□□□ 0.18
RAET1E-201ENST00000357183 KIF13AQ9H1H9 1805 aa16.17■□□□□ 0.18
RAET1E-201ENST00000357183 CHIC1Q5VXU3 224 aa16.14■□□□□ 0.17
RAET1E-201ENST00000357183 ERICH3Q5RHP9 1530 aa16.14■□□□□ 0.17
RAET1E-201ENST00000357183 PRG4Q92954 1404 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms