RNA–Protein interactions for RNA: ENST00000356023.5

NPIPB2-201, Transcript of nuclear pore complex interacting protein family, member B2, humanhuman

TSL 4

Gene NPIPB2, Length 548 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB2-201ENST00000356023 NISCHQ9Y2I1 1504 aa19.96■□□□□ 0.79
NPIPB2-201ENST00000356023 ABCC9O60706 1549 aa18.44■□□□□ 0.54
NPIPB2-201ENST00000356023 CCDC180Q9P1Z9 1646 aa18.05■□□□□ 0.48
NPIPB2-201ENST00000356023 DNAJC5BQ9UF47 199 aa18■□□□□ 0.47
NPIPB2-201ENST00000356023 CHIC1Q5VXU3 224 aa17.75■□□□□ 0.43
NPIPB2-201ENST00000356023 RB1CC1Q8TDY2 1594 aa17.32■□□□□ 0.36
NPIPB2-201ENST00000356023 NACADO15069 1562 aa17.14■□□□□ 0.33
NPIPB2-201ENST00000356023 AEBP2Q6ZN18 517 aaPredicted RBP17.05■□□□□ 0.32
NPIPB2-201ENST00000356023 PABPN1Q86U42 306 aaKnown RBP eCLIP17.03■□□□□ 0.32
NPIPB2-201ENST00000356023 UNC13AQ9UPW8 1703 aa17.01■□□□□ 0.31
NPIPB2-201ENST00000356023 DCAF8L2P0C7V8 631 aa16.96■□□□□ 0.31
NPIPB2-201ENST00000356023 BICRAQ9NZM4 1560 aa16.9■□□□□ 0.3
NPIPB2-201ENST00000356023 DNAJC5Q9H3Z4 198 aa16.88■□□□□ 0.29
NPIPB2-201ENST00000356023 MYO15BQ96JP2 1530 aa16.82■□□□□ 0.28
NPIPB2-201ENST00000356023 CC2D2AQ9P2K1 1620 aa16.66■□□□□ 0.26
NPIPB2-201ENST00000356023 CECR2Q9BXF3 1484 aa16.65■□□□□ 0.26
NPIPB2-201ENST00000356023 SHROOM4Q9ULL8 1493 aa16.6■□□□□ 0.25
NPIPB2-201ENST00000356023 DCAF1Q9Y4B6 1507 aa16.49■□□□□ 0.23
NPIPB2-201ENST00000356023 ZCCHC6Q5VYS8 1495 aaKnown RBP16.47■□□□□ 0.23
NPIPB2-201ENST00000356023 EIF4G1Q04637 1599 aaKnown RBP16.44■□□□□ 0.22
NPIPB2-201ENST00000356023 SCRIBQ14160 1630 aa16.39■□□□□ 0.21
NPIPB2-201ENST00000356023 CUX2O14529 1486 aa16.11■□□□□ 0.17
NPIPB2-201ENST00000356023 ERCC6Q03468 1493 aa15.85■□□□□ 0.13
NPIPB2-201ENST00000356023 NCAPD3P42695 1498 aa15.82■□□□□ 0.12
NPIPB2-201ENST00000356023 TRIM41Q8WV44 630 aa15.8■□□□□ 0.12
NPIPB2-201ENST00000356023 PHF23Q9BUL5 403 aaPredicted RBP15.75■□□□□ 0.11
NPIPB2-201ENST00000356023 ATAD2BQ9ULI0 1458 aa15.71■□□□□ 0.11
NPIPB2-201ENST00000356023 NESP48681 1621 aa15.71■□□□□ 0.11
NPIPB2-201ENST00000356023 THOC2Q8NI27 1593 aaKnown RBP15.7■□□□□ 0.1
NPIPB2-201ENST00000356023 SMARCA2P51531 1590 aa15.67■□□□□ 0.1
NPIPB2-201ENST00000356023 HMGXB3Q12766 1538 aa15.67■□□□□ 0.1
NPIPB2-201ENST00000356023 SMARCA4P51532 1647 aa15.62■□□□□ 0.09
NPIPB2-201ENST00000356023 BAZ1BQ9UIG0 1483 aaKnown RBP15.55■□□□□ 0.08
NPIPB2-201ENST00000356023 BAZ1AQ9NRL2 1556 aaPredicted RBP15.52■□□□□ 0.07
NPIPB2-201ENST00000356023 LAMC3Q9Y6N6 1575 aa15.51■□□□□ 0.07
NPIPB2-201ENST00000356023 KIF21AQ7Z4S6 1674 aa15.51■□□□□ 0.07
NPIPB2-201ENST00000356023 PEG3Q9GZU2 1588 aa15.49■□□□□ 0.07
NPIPB2-201ENST00000356023 PDS5BQ9NTI5 1447 aa15.43■□□□□ 0.06
NPIPB2-201ENST00000356023 MROH2BQ7Z745 1585 aa15.35■□□□□ 0.05
NPIPB2-201ENST00000356023 CADPSQ9ULU8 1353 aa15.32■□□□□ 0.04
NPIPB2-201ENST00000356023 MRC2Q9UBG0 1479 aa15.3■□□□□ 0.04
NPIPB2-201ENST00000356023 WDR62O43379 1518 aa15.27■□□□□ 0.04
NPIPB2-201ENST00000356023 RIMBP3CA6NJZ7 1639 aa15.24■□□□□ 0.03
NPIPB2-201ENST00000356023 RIMBP3BA6NNM3 1639 aa15.24■□□□□ 0.03
NPIPB2-201ENST00000356023 RIMBP3Q9UFD9 1639 aa15.24■□□□□ 0.03
NPIPB2-201ENST00000356023 CEP164Q9UPV0 1460 aa15.18■□□□□ 0.02
NPIPB2-201ENST00000356023 OSCARQ8IYS5 282 aa15.17■□□□□ 0.02
NPIPB2-201ENST00000356023 WIZO95785 1651 aa15.16■□□□□ 0.02
NPIPB2-201ENST00000356023 FANCD2Q9BXW9 1451 aa15.14■□□□□ 0.01
NPIPB2-201ENST00000356023 CFTRP13569 1480 aa15.08■□□□□ 0.01
NPIPB2-201ENST00000356023 ARHGEF11O15085 1522 aa15.08■□□□□ 0.01
NPIPB2-201ENST00000356023 URB2Q14146 1524 aaKnown RBP15.02□□□□□ -0.01
NPIPB2-201ENST00000356023 TOP2AP11388 1531 aaKnown RBP14.96□□□□□ -0.02
NPIPB2-201ENST00000356023 RSF1Q96T23 1441 aaPredicted RBP14.93□□□□□ -0.02
NPIPB2-201ENST00000356023 PRDM2Q13029 1718 aa14.93□□□□□ -0.02
NPIPB2-201ENST00000356023 PLPPR3Q6T4P5 718 aa14.93□□□□□ -0.02
NPIPB2-201ENST00000356023 ARAP1Q96P48 1450 aa14.92□□□□□ -0.02
NPIPB2-201ENST00000356023 IFT140Q96RY7 1462 aa14.9□□□□□ -0.02
NPIPB2-201ENST00000356023 CYB5RLQ6IPT4 315 aa14.9□□□□□ -0.02
NPIPB2-201ENST00000356023 ZNF608Q9ULD9 1512 aaPredicted RBP14.89□□□□□ -0.03
NPIPB2-201ENST00000356023 TRHP20396 242 aaPredicted RBP14.89□□□□□ -0.03
NPIPB2-201ENST00000356023 EHMT2Q96KQ7 1210 aa14.88□□□□□ -0.03
NPIPB2-201ENST00000356023 TOPBP1Q92547 1522 aa14.82□□□□□ -0.04
NPIPB2-201ENST00000356023 ABCC8Q09428 1581 aa14.81□□□□□ -0.04
NPIPB2-201ENST00000356023 CHD1O14646 1710 aa14.8□□□□□ -0.04
NPIPB2-201ENST00000356023 CCDC88BA6NC98 1476 aa14.79□□□□□ -0.04
NPIPB2-201ENST00000356023 EIF4G3O43432 1585 aaKnown RBP14.79□□□□□ -0.04
NPIPB2-201ENST00000356023 DNMBPQ6XZF7 1577 aa14.74□□□□□ -0.05
NPIPB2-201ENST00000356023 AQRO60306 1485 aaKnown RBP eCLIP14.71□□□□□ -0.05
NPIPB2-201ENST00000356023 TARBP1Q13395 1621 aaKnown RBP14.71□□□□□ -0.05
NPIPB2-201ENST00000356023 FBLN2P98095 1184 aa14.69□□□□□ -0.06
NPIPB2-201ENST00000356023 POLA1P09884 1462 aaPredicted RBP14.64□□□□□ -0.07
NPIPB2-201ENST00000356023 CLASP1Q7Z460 1538 aa14.61□□□□□ -0.07
NPIPB2-201ENST00000356023 SOGA1O94964 1423 aa14.58□□□□□ -0.07
NPIPB2-201ENST00000356023 RAD54L2Q9Y4B4 1467 aa14.58□□□□□ -0.08
NPIPB2-201ENST00000356023 WDR97A6NE52 1622 aa14.58□□□□□ -0.08
NPIPB2-201ENST00000356023 TDRD9Q8NDG6 1382 aaKnown RBP14.58□□□□□ -0.08
NPIPB2-201ENST00000356023 CHMP7Q8WUX9 453 aaPredicted RBP14.55□□□□□ -0.08
NPIPB2-201ENST00000356023 SNAPC4Q5SXM2 1469 aa14.55□□□□□ -0.08
NPIPB2-201ENST00000356023 SYNJ1O43426 1573 aa14.55□□□□□ -0.08
NPIPB2-201ENST00000356023 MAGI1Q96QZ7 1491 aaPredicted RBP14.53□□□□□ -0.08
NPIPB2-201ENST00000356023 ILDR1Q86SU0 546 aaPredicted RBP14.53□□□□□ -0.08
NPIPB2-201ENST00000356023 FGD5Q6ZNL6 1462 aa14.5□□□□□ -0.09
NPIPB2-201ENST00000356023 GRIN2BQ13224 1484 aa14.49□□□□□ -0.09
NPIPB2-201ENST00000356023 SYNJ2O15056 1496 aa14.48□□□□□ -0.09
NPIPB2-201ENST00000356023 CUX1P39880 1505 aa14.44□□□□□ -0.1
NPIPB2-201ENST00000356023 GAPVD1Q14C86 1478 aa14.44□□□□□ -0.1
NPIPB2-201ENST00000356023 KIF13AQ9H1H9 1805 aa14.42□□□□□ -0.1
NPIPB2-201ENST00000356023 PBRM1Q86U86 1689 aa14.41□□□□□ -0.1
NPIPB2-201ENST00000356023 ERCC6L2Q5T890 1561 aa14.39□□□□□ -0.11
NPIPB2-201ENST00000356023 KCNA4P22459 653 aa14.36□□□□□ -0.11
NPIPB2-201ENST00000356023 ABCA10Q8WWZ4 1543 aa14.35□□□□□ -0.11
NPIPB2-201ENST00000356023 ABCA5Q8WWZ7 1642 aa14.33□□□□□ -0.11
NPIPB2-201ENST00000356023 KDM4FA0A1W2PPD8 638 aa14.32□□□□□ -0.12
NPIPB2-201ENST00000356023 GRIN2AQ12879 1464 aa14.3□□□□□ -0.12
NPIPB2-201ENST00000356023 SLC24A1O60721 1099 aa14.29□□□□□ -0.12
NPIPB2-201ENST00000356023 CEP170Q5SW79 1584 aa14.27□□□□□ -0.12
NPIPB2-201ENST00000356023 NUP160Q12769 1436 aa14.26□□□□□ -0.13
NPIPB2-201ENST00000356023 SENP3Q9H4L4 574 aaPredicted RBP14.25□□□□□ -0.13
NPIPB2-201ENST00000356023 SHROOM2Q13796 1616 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms