RNA–Protein interactions for RNA: ENST00000354571.5

TWIST1-202, Transcript of twist family bHLH transcription factor 1, humanhuman

TSL 2

Gene TWIST1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWIST1-202ENST00000354571 NISCHQ9Y2I1 1504 aa52.71■■■■■ 6.03
TWIST1-202ENST00000354571 CCDC180Q9P1Z9 1646 aa46.42■■■■■ 5.02
TWIST1-202ENST00000354571 ABCC9O60706 1549 aa44.34■■■■■ 4.69
TWIST1-202ENST00000354571 ZCCHC6Q5VYS8 1495 aaKnown RBP44.14■■■■■ 4.66
TWIST1-202ENST00000354571 DCAF1Q9Y4B6 1507 aa43.69■■■■■ 4.59
TWIST1-202ENST00000354571 DCAF8L2P0C7V8 631 aa43.56■■■■■ 4.56
TWIST1-202ENST00000354571 MYO15BQ96JP2 1530 aa43.48■■■■■ 4.55
TWIST1-202ENST00000354571 NACADO15069 1562 aa43.37■■■■■ 4.53
TWIST1-202ENST00000354571 RB1CC1Q8TDY2 1594 aa43.16■■■■■ 4.5
TWIST1-202ENST00000354571 SCRIBQ14160 1630 aa42.4■■■■■ 4.38
TWIST1-202ENST00000354571 SHROOM4Q9ULL8 1493 aa42.25■■■■■ 4.35
TWIST1-202ENST00000354571 UNC13AQ9UPW8 1703 aa42.19■■■■■ 4.34
TWIST1-202ENST00000354571 BICRAQ9NZM4 1560 aa41.8■■■■■ 4.28
TWIST1-202ENST00000354571 PABPN1Q86U42 306 aaKnown RBP eCLIP41.6■■■■■ 4.25
TWIST1-202ENST00000354571 CECR2Q9BXF3 1484 aa40.92■■■■■ 4.14
TWIST1-202ENST00000354571 BAZ1AQ9NRL2 1556 aaPredicted RBP40.79■■■■■ 4.12
TWIST1-202ENST00000354571 SMARCA4P51532 1647 aa40.67■■■■■ 4.1
TWIST1-202ENST00000354571 MROH2BQ7Z745 1585 aa40.63■■■■■ 4.09
TWIST1-202ENST00000354571 EIF4G1Q04637 1599 aaKnown RBP40.61■■■■■ 4.09
TWIST1-202ENST00000354571 RSF1Q96T23 1441 aaPredicted RBP40.55■■■■■ 4.08
TWIST1-202ENST00000354571 SUPT5HO00267 1087 aaKnown RBP40.31■■■■■ 4.04
TWIST1-202ENST00000354571 PEG3Q9GZU2 1588 aa40.27■■■■■ 4.04
TWIST1-202ENST00000354571 WIZO95785 1651 aa40.25■■■■■ 4.03
TWIST1-202ENST00000354571 SMARCA2P51531 1590 aa40.19■■■■■ 4.02
TWIST1-202ENST00000354571 CC2D2AQ9P2K1 1620 aa40.18■■■■■ 4.02
TWIST1-202ENST00000354571 ATAD2BQ9ULI0 1458 aa40.18■■■■■ 4.02
TWIST1-202ENST00000354571 NCAPD3P42695 1498 aa40■■■■□ 3.99
TWIST1-202ENST00000354571 BAZ1BQ9UIG0 1483 aaKnown RBP39.91■■■■□ 3.98
TWIST1-202ENST00000354571 TOP2AP11388 1531 aaKnown RBP39.91■■■■□ 3.98
TWIST1-202ENST00000354571 HMGXB3Q12766 1538 aa39.91■■■■□ 3.98
TWIST1-202ENST00000354571 DNAJC5BQ9UF47 199 aa39.7■■■■□ 3.95
TWIST1-202ENST00000354571 CCDC88BA6NC98 1476 aa39.42■■■■□ 3.9
TWIST1-202ENST00000354571 CADPSQ9ULU8 1353 aa38.89■■■■□ 3.82
TWIST1-202ENST00000354571 CFTRP13569 1480 aa38.88■■■■□ 3.81
TWIST1-202ENST00000354571 LAMC3Q9Y6N6 1575 aa38.78■■■■□ 3.8
TWIST1-202ENST00000354571 PRDM2Q13029 1718 aa38.71■■■■□ 3.79
TWIST1-202ENST00000354571 NESP48681 1621 aa38.68■■■■□ 3.78
TWIST1-202ENST00000354571 PDS5BQ9NTI5 1447 aa38.47■■■■□ 3.75
TWIST1-202ENST00000354571 FANCD2Q9BXW9 1451 aa38.44■■■■□ 3.74
TWIST1-202ENST00000354571 CEP164Q9UPV0 1460 aa38.29■■■■□ 3.72
TWIST1-202ENST00000354571 ABCC8Q09428 1581 aa38.29■■■■□ 3.72
TWIST1-202ENST00000354571 KIF21AQ7Z4S6 1674 aa38.28■■■■□ 3.72
TWIST1-202ENST00000354571 CHIC1Q5VXU3 224 aa38.27■■■■□ 3.72
TWIST1-202ENST00000354571 WRNQ14191 1432 aaPredicted RBP eCLIP38.21■■■■□ 3.71
TWIST1-202ENST00000354571 ERCC6Q03468 1493 aa38.14■■■■□ 3.7
TWIST1-202ENST00000354571 SYNJ1O43426 1573 aa38.06■■■■□ 3.68
TWIST1-202ENST00000354571 TRIM41Q8WV44 630 aa38.05■■■■□ 3.68
TWIST1-202ENST00000354571 CUX1P39880 1505 aa38.05■■■■□ 3.68
TWIST1-202ENST00000354571 TOP2BQ02880 1626 aa38.03■■■■□ 3.68
TWIST1-202ENST00000354571 BIVM-ERCC5R4GMW8 1640 aa38.02■■■■□ 3.68
TWIST1-202ENST00000354571 MRC2Q9UBG0 1479 aa38.02■■■■□ 3.68
TWIST1-202ENST00000354571 DNMBPQ6XZF7 1577 aa38.01■■■■□ 3.67
TWIST1-202ENST00000354571 URB2Q14146 1524 aaKnown RBP37.98■■■■□ 3.67
TWIST1-202ENST00000354571 TOPBP1Q92547 1522 aa37.95■■■■□ 3.67
TWIST1-202ENST00000354571 THOC2Q8NI27 1593 aaKnown RBP37.89■■■■□ 3.66
TWIST1-202ENST00000354571 WDR62O43379 1518 aa37.87■■■■□ 3.65
TWIST1-202ENST00000354571 FGD5Q6ZNL6 1462 aa37.76■■■■□ 3.63
TWIST1-202ENST00000354571 POLA1P09884 1462 aaPredicted RBP37.69■■■■□ 3.62
TWIST1-202ENST00000354571 SOGA1O94964 1423 aa37.56■■■■□ 3.6
TWIST1-202ENST00000354571 CUX2O14529 1486 aa37.52■■■■□ 3.6
TWIST1-202ENST00000354571 RAD54L2Q9Y4B4 1467 aa37.51■■■■□ 3.59
TWIST1-202ENST00000354571 TARBP1Q13395 1621 aaKnown RBP37.46■■■■□ 3.59
TWIST1-202ENST00000354571 ABCA10Q8WWZ4 1543 aa37.46■■■■□ 3.59
TWIST1-202ENST00000354571 IFT140Q96RY7 1462 aa37.45■■■■□ 3.59
TWIST1-202ENST00000354571 WDR97A6NE52 1622 aa37.42■■■■□ 3.58
TWIST1-202ENST00000354571 EEA1Q15075 1411 aa37.36■■■■□ 3.57
TWIST1-202ENST00000354571 KIF27Q86VH2 1401 aa37.34■■■■□ 3.57
TWIST1-202ENST00000354571 RUSC2Q8N2Y8 1516 aa37.31■■■■□ 3.56
TWIST1-202ENST00000354571 ABCA5Q8WWZ7 1642 aa37.21■■■■□ 3.55
TWIST1-202ENST00000354571 FAM9AQ8IZU1 332 aaPredicted RBP37.21■■■■□ 3.55
TWIST1-202ENST00000354571 TDRD9Q8NDG6 1382 aaKnown RBP37.2■■■■□ 3.55
TWIST1-202ENST00000354571 ZNF608Q9ULD9 1512 aaPredicted RBP37.16■■■■□ 3.54
TWIST1-202ENST00000354571 GAPVD1Q14C86 1478 aa37.14■■■■□ 3.54
TWIST1-202ENST00000354571 CSRNP3Q8WYN3 585 aa37.13■■■■□ 3.53
TWIST1-202ENST00000354571 EIF4G3O43432 1585 aaKnown RBP37.09■■■■□ 3.53
TWIST1-202ENST00000354571 AQRO60306 1485 aaKnown RBP eCLIP37.09■■■■□ 3.53
TWIST1-202ENST00000354571 IGF1RP08069 1367 aa37.04■■■■□ 3.52
TWIST1-202ENST00000354571 ERICH3Q5RHP9 1530 aa37.04■■■■□ 3.52
TWIST1-202ENST00000354571 PBRM1Q86U86 1689 aa37.02■■■■□ 3.52
TWIST1-202ENST00000354571 GRIN2BQ13224 1484 aa37■■■■□ 3.51
TWIST1-202ENST00000354571 CUL7Q14999 1698 aa36.91■■■■□ 3.5
TWIST1-202ENST00000354571 PRXQ9BXM0 1461 aa36.89■■■■□ 3.5
TWIST1-202ENST00000354571 KIF21BO75037 1637 aa36.88■■■■□ 3.5
TWIST1-202ENST00000354571 CARMIL1Q5VZK9 1371 aa36.85■■■■□ 3.49
TWIST1-202ENST00000354571 SNAPC4Q5SXM2 1469 aa36.79■■■■□ 3.48
TWIST1-202ENST00000354571 MAGI1Q96QZ7 1491 aaPredicted RBP36.79■■■■□ 3.48
TWIST1-202ENST00000354571 ADAMTS12P58397 1594 aa36.78■■■■□ 3.48
TWIST1-202ENST00000354571 RAPGEF2Q9Y4G8 1499 aa36.76■■■■□ 3.48
TWIST1-202ENST00000354571 FHAD1B1AJZ9 1412 aa36.76■■■■□ 3.47
TWIST1-202ENST00000354571 GOLGA3Q08378 1498 aa36.75■■■■□ 3.47
TWIST1-202ENST00000354571 LOC105371045A0A1W2PR82 267 aa36.68■■■■□ 3.46
TWIST1-202ENST00000354571 SYNJ2O15056 1496 aa36.63■■■■□ 3.45
TWIST1-202ENST00000354571 EHMT2Q96KQ7 1210 aa36.6■■■■□ 3.45
TWIST1-202ENST00000354571 UBTFP17480 764 aaKnown RBP36.53■■■■□ 3.44
TWIST1-202ENST00000354571 GRIN2AQ12879 1464 aa36.53■■■■□ 3.44
TWIST1-202ENST00000354571 CHMP7Q8WUX9 453 aaPredicted RBP36.51■■■■□ 3.44
TWIST1-202ENST00000354571 TNIKQ9UKE5 1360 aa36.49■■■■□ 3.43
TWIST1-202ENST00000354571 FBLN2P98095 1184 aa36.43■■■■□ 3.42
TWIST1-202ENST00000354571 CHD1O14646 1710 aa36.42■■■■□ 3.42
TWIST1-202ENST00000354571 CTTNBP2Q8WZ74 1663 aa36.37■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms