RNA–Protein interactions for RNA: ENST00000349984.6

CCR6-202, Transcript of C-C motif chemokine receptor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR6, Length 2,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR6-202ENST00000349984 NISCHQ9Y2I1 1504 aa16.16■□□□□ 0.18
CCR6-202ENST00000349984 CCDC180Q9P1Z9 1646 aa15.12■□□□□ 0.01
CCR6-202ENST00000349984 MYO15BQ96JP2 1530 aa14.39□□□□□ -0.11
CCR6-202ENST00000349984 ABCC9O60706 1549 aa14.28□□□□□ -0.12
CCR6-202ENST00000349984 DCAF1Q9Y4B6 1507 aa14.18□□□□□ -0.14
CCR6-202ENST00000349984 SHROOM4Q9ULL8 1493 aa13.99□□□□□ -0.17
CCR6-202ENST00000349984 NACADO15069 1562 aa13.83□□□□□ -0.2
CCR6-202ENST00000349984 DCAF8L2P0C7V8 631 aa13.71□□□□□ -0.22
CCR6-202ENST00000349984 ZCCHC6Q5VYS8 1495 aaKnown RBP13.6□□□□□ -0.23
CCR6-202ENST00000349984 RB1CC1Q8TDY2 1594 aa13.6□□□□□ -0.23
CCR6-202ENST00000349984 UNC13AQ9UPW8 1703 aa13.42□□□□□ -0.26
CCR6-202ENST00000349984 PABPN1Q86U42 306 aaKnown RBP eCLIP13.38□□□□□ -0.27
CCR6-202ENST00000349984 SCRIBQ14160 1630 aa13.28□□□□□ -0.28
CCR6-202ENST00000349984 BICRAQ9NZM4 1560 aa13.25□□□□□ -0.29
CCR6-202ENST00000349984 DNAJC5BQ9UF47 199 aa13.23□□□□□ -0.29
CCR6-202ENST00000349984 PEG3Q9GZU2 1588 aa13.01□□□□□ -0.33
CCR6-202ENST00000349984 PELP1Q8IZL8 1130 aaKnown RBP12.96□□□□□ -0.33
CCR6-202ENST00000349984 SMARCA2P51531 1590 aa12.9□□□□□ -0.34
CCR6-202ENST00000349984 EIF4G1Q04637 1599 aaKnown RBP12.86□□□□□ -0.35
CCR6-202ENST00000349984 CC2D2AQ9P2K1 1620 aa12.86□□□□□ -0.35
CCR6-202ENST00000349984 MYT1Q01538 1121 aa12.78□□□□□ -0.36
CCR6-202ENST00000349984 HMGXB3Q12766 1538 aa12.76□□□□□ -0.37
CCR6-202ENST00000349984 CECR2Q9BXF3 1484 aa12.75□□□□□ -0.37
CCR6-202ENST00000349984 PRDM2Q13029 1718 aa12.65□□□□□ -0.38
CCR6-202ENST00000349984 BAZ1AQ9NRL2 1556 aaPredicted RBP12.6□□□□□ -0.39
CCR6-202ENST00000349984 SMARCA4P51532 1647 aa12.59□□□□□ -0.39
CCR6-202ENST00000349984 MROH2BQ7Z745 1585 aa12.56□□□□□ -0.4
CCR6-202ENST00000349984 NCAPD3P42695 1498 aa12.51□□□□□ -0.41
CCR6-202ENST00000349984 ATAD2BQ9ULI0 1458 aa12.51□□□□□ -0.41
CCR6-202ENST00000349984 WIZO95785 1651 aa12.46□□□□□ -0.41
CCR6-202ENST00000349984 WDR97A6NE52 1622 aa12.45□□□□□ -0.42
CCR6-202ENST00000349984 BAZ1BQ9UIG0 1483 aaKnown RBP12.4□□□□□ -0.42
CCR6-202ENST00000349984 NESP48681 1621 aa12.38□□□□□ -0.43
CCR6-202ENST00000349984 RSF1Q96T23 1441 aaPredicted RBP12.34□□□□□ -0.43
CCR6-202ENST00000349984 TTBK1Q5TCY1 1321 aaPredicted RBP12.33□□□□□ -0.44
CCR6-202ENST00000349984 LAMC3Q9Y6N6 1575 aa12.32□□□□□ -0.44
CCR6-202ENST00000349984 TOP2AP11388 1531 aaKnown RBP12.29□□□□□ -0.44
CCR6-202ENST00000349984 ERCC6Q03468 1493 aa12.22□□□□□ -0.45
CCR6-202ENST00000349984 KIF21AQ7Z4S6 1674 aa12.21□□□□□ -0.45
CCR6-202ENST00000349984 SUPT5HO00267 1087 aaKnown RBP12.12□□□□□ -0.47
CCR6-202ENST00000349984 THOC2Q8NI27 1593 aaKnown RBP12.1□□□□□ -0.47
CCR6-202ENST00000349984 CCDC88BA6NC98 1476 aa12.1□□□□□ -0.47
CCR6-202ENST00000349984 CADPSQ9ULU8 1353 aa12.1□□□□□ -0.47
CCR6-202ENST00000349984 CUX2O14529 1486 aa12.09□□□□□ -0.47
CCR6-202ENST00000349984 ABCC8Q09428 1581 aa12.04□□□□□ -0.48
CCR6-202ENST00000349984 CFTRP13569 1480 aa12.03□□□□□ -0.48
CCR6-202ENST00000349984 PDS5BQ9NTI5 1447 aa12.02□□□□□ -0.49
CCR6-202ENST00000349984 FANCD2Q9BXW9 1451 aa12.02□□□□□ -0.49
CCR6-202ENST00000349984 PRKCSHP14314 528 aaPredicted RBP12.02□□□□□ -0.49
CCR6-202ENST00000349984 WDR62O43379 1518 aa12.01□□□□□ -0.49
CCR6-202ENST00000349984 CEP164Q9UPV0 1460 aa11.98□□□□□ -0.49
CCR6-202ENST00000349984 MRC2Q9UBG0 1479 aa11.96□□□□□ -0.49
CCR6-202ENST00000349984 URB2Q14146 1524 aaKnown RBP11.95□□□□□ -0.5
CCR6-202ENST00000349984 BIVM-ERCC5R4GMW8 1640 aa11.93□□□□□ -0.5
CCR6-202ENST00000349984 HRCP23327 699 aa11.91□□□□□ -0.5
CCR6-202ENST00000349984 TOPBP1Q92547 1522 aa11.83□□□□□ -0.52
CCR6-202ENST00000349984 ZNF608Q9ULD9 1512 aaPredicted RBP11.82□□□□□ -0.52
CCR6-202ENST00000349984 DNMBPQ6XZF7 1577 aa11.81□□□□□ -0.52
CCR6-202ENST00000349984 DNAJC5Q9H3Z4 198 aa11.78□□□□□ -0.52
CCR6-202ENST00000349984 APLP2Q06481 763 aa11.77□□□□□ -0.52
CCR6-202ENST00000349984 RAD54L2Q9Y4B4 1467 aa11.77□□□□□ -0.53
CCR6-202ENST00000349984 ERICH6Q7L0X2 663 aa11.77□□□□□ -0.53
CCR6-202ENST00000349984 CUX1P39880 1505 aa11.77□□□□□ -0.53
CCR6-202ENST00000349984 SCAF1Q9H7N4 1312 aaKnown RBP11.74□□□□□ -0.53
CCR6-202ENST00000349984 POLA1P09884 1462 aaPredicted RBP11.74□□□□□ -0.53
CCR6-202ENST00000349984 TARBP1Q13395 1621 aaKnown RBP11.72□□□□□ -0.53
CCR6-202ENST00000349984 AQRO60306 1485 aaKnown RBP eCLIP11.72□□□□□ -0.53
CCR6-202ENST00000349984 EIF4G3O43432 1585 aaKnown RBP11.72□□□□□ -0.53
CCR6-202ENST00000349984 FGD5Q6ZNL6 1462 aa11.71□□□□□ -0.53
CCR6-202ENST00000349984 BCL11AQ9H165 835 aa11.7□□□□□ -0.54
CCR6-202ENST00000349984 TOP2BQ02880 1626 aa11.7□□□□□ -0.54
CCR6-202ENST00000349984 SLC24A1O60721 1099 aa11.69□□□□□ -0.54
CCR6-202ENST00000349984 IFT140Q96RY7 1462 aa11.68□□□□□ -0.54
CCR6-202ENST00000349984 TDRD9Q8NDG6 1382 aaKnown RBP11.68□□□□□ -0.54
CCR6-202ENST00000349984 SYNJ1O43426 1573 aa11.68□□□□□ -0.54
CCR6-202ENST00000349984 ABCA5Q8WWZ7 1642 aa11.65□□□□□ -0.54
CCR6-202ENST00000349984 SOGA1O94964 1423 aa11.65□□□□□ -0.54
CCR6-202ENST00000349984 CHD1O14646 1710 aa11.62□□□□□ -0.55
CCR6-202ENST00000349984 FBLN2P98095 1184 aa11.61□□□□□ -0.55
CCR6-202ENST00000349984 WRNQ14191 1432 aaPredicted RBP eCLIP11.6□□□□□ -0.55
CCR6-202ENST00000349984 CUL7Q14999 1698 aa11.59□□□□□ -0.55
CCR6-202ENST00000349984 SNAPC4Q5SXM2 1469 aa11.57□□□□□ -0.56
CCR6-202ENST00000349984 PBRM1Q86U86 1689 aa11.56□□□□□ -0.56
CCR6-202ENST00000349984 ERICH3Q5RHP9 1530 aa11.56□□□□□ -0.56
CCR6-202ENST00000349984 ABCA10Q8WWZ4 1543 aa11.55□□□□□ -0.56
CCR6-202ENST00000349984 FAM9AQ8IZU1 332 aaPredicted RBP11.55□□□□□ -0.56
CCR6-202ENST00000349984 OSCARQ8IYS5 282 aa11.54□□□□□ -0.56
CCR6-202ENST00000349984 TRIM41Q8WV44 630 aa11.53□□□□□ -0.56
CCR6-202ENST00000349984 SHROOM2Q13796 1616 aa11.53□□□□□ -0.56
CCR6-202ENST00000349984 GAPVD1Q14C86 1478 aa11.51□□□□□ -0.57
CCR6-202ENST00000349984 PPARGC1BQ86YN6 1023 aaKnown RBP11.49□□□□□ -0.57
CCR6-202ENST00000349984 GRIN2BQ13224 1484 aa11.48□□□□□ -0.57
CCR6-202ENST00000349984 RIMBP3CA6NJZ7 1639 aa11.48□□□□□ -0.57
CCR6-202ENST00000349984 RIMBP3BA6NNM3 1639 aa11.48□□□□□ -0.57
CCR6-202ENST00000349984 RIMBP3Q9UFD9 1639 aa11.48□□□□□ -0.57
CCR6-202ENST00000349984 MAGI1Q96QZ7 1491 aaPredicted RBP11.48□□□□□ -0.57
CCR6-202ENST00000349984 CHMP7Q8WUX9 453 aaPredicted RBP11.46□□□□□ -0.58
CCR6-202ENST00000349984 ARHGEF11O15085 1522 aa11.43□□□□□ -0.58
CCR6-202ENST00000349984 CLASP1Q7Z460 1538 aa11.43□□□□□ -0.58
CCR6-202ENST00000349984 ADAMTS12P58397 1594 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms