RNA–Protein interactions for RNA: ENST00000346141.10

TUBD1-203, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-203ENST00000346141 NISCHQ9Y2I1 1504 aa29.45■■■□□ 2.31
TUBD1-203ENST00000346141 AEBP2Q6ZN18 517 aaPredicted RBP28.63■■■□□ 2.17
TUBD1-203ENST00000346141 CHIC1Q5VXU3 224 aa27.65■■■□□ 2.02
TUBD1-203ENST00000346141 CCDC180Q9P1Z9 1646 aa26.34■■□□□ 1.81
TUBD1-203ENST00000346141 ABCC9O60706 1549 aa26.08■■□□□ 1.77
TUBD1-203ENST00000346141 RB1CC1Q8TDY2 1594 aa24.97■■□□□ 1.59
TUBD1-203ENST00000346141 NACADO15069 1562 aa24.86■■□□□ 1.57
TUBD1-203ENST00000346141 DCAF8L2P0C7V8 631 aa24.72■■□□□ 1.55
TUBD1-203ENST00000346141 MYO15BQ96JP2 1530 aa24.63■■□□□ 1.53
TUBD1-203ENST00000346141 ZCCHC6Q5VYS8 1495 aaKnown RBP24.46■■□□□ 1.51
TUBD1-203ENST00000346141 DCAF1Q9Y4B6 1507 aa24.38■■□□□ 1.49
TUBD1-203ENST00000346141 PHF23Q9BUL5 403 aaPredicted RBP24.33■■□□□ 1.49
TUBD1-203ENST00000346141 UNC13AQ9UPW8 1703 aa24.32■■□□□ 1.48
TUBD1-203ENST00000346141 PABPN1Q86U42 306 aaKnown RBP eCLIP24.32■■□□□ 1.48
TUBD1-203ENST00000346141 SENP3Q9H4L4 574 aaPredicted RBP24.27■■□□□ 1.48
TUBD1-203ENST00000346141 DNAJC5BQ9UF47 199 aa24.25■■□□□ 1.47
TUBD1-203ENST00000346141 BICRAQ9NZM4 1560 aa24.19■■□□□ 1.46
TUBD1-203ENST00000346141 SHROOM4Q9ULL8 1493 aa23.99■■□□□ 1.43
TUBD1-203ENST00000346141 SCRIBQ14160 1630 aa23.98■■□□□ 1.43
TUBD1-203ENST00000346141 EIF4G1Q04637 1599 aaKnown RBP23.6■■□□□ 1.37
TUBD1-203ENST00000346141 CC2D2AQ9P2K1 1620 aa23.58■■□□□ 1.37
TUBD1-203ENST00000346141 CECR2Q9BXF3 1484 aa23.5■■□□□ 1.35
TUBD1-203ENST00000346141 NCAPD3P42695 1498 aa22.95■■□□□ 1.26
TUBD1-203ENST00000346141 SMARCA4P51532 1647 aa22.92■■□□□ 1.26
TUBD1-203ENST00000346141 ATAD2BQ9ULI0 1458 aa22.89■■□□□ 1.26
TUBD1-203ENST00000346141 SMARCA2P51531 1590 aa22.87■■□□□ 1.25
TUBD1-203ENST00000346141 BAZ1AQ9NRL2 1556 aaPredicted RBP22.86■■□□□ 1.25
TUBD1-203ENST00000346141 HMGXB3Q12766 1538 aa22.8■■□□□ 1.24
TUBD1-203ENST00000346141 PEG3Q9GZU2 1588 aa22.72■■□□□ 1.23
TUBD1-203ENST00000346141 BAZ1BQ9UIG0 1483 aaKnown RBP22.69■■□□□ 1.22
TUBD1-203ENST00000346141 MROH2BQ7Z745 1585 aa22.67■■□□□ 1.22
TUBD1-203ENST00000346141 FOXD1Q16676 465 aa22.61■■□□□ 1.21
TUBD1-203ENST00000346141 ERCC6Q03468 1493 aa22.54■■□□□ 1.2
TUBD1-203ENST00000346141 NESP48681 1621 aa22.46■■□□□ 1.19
TUBD1-203ENST00000346141 CUX2O14529 1486 aa22.45■■□□□ 1.18
TUBD1-203ENST00000346141 LAMC3Q9Y6N6 1575 aa22.39■■□□□ 1.17
TUBD1-203ENST00000346141 WIZO95785 1651 aa22.38■■□□□ 1.17
TUBD1-203ENST00000346141 PLPPR3Q6T4P5 718 aa22.33■■□□□ 1.16
TUBD1-203ENST00000346141 RSF1Q96T23 1441 aaPredicted RBP22.31■■□□□ 1.16
TUBD1-203ENST00000346141 PDS5BQ9NTI5 1447 aa22.27■■□□□ 1.16
TUBD1-203ENST00000346141 CADPSQ9ULU8 1353 aa22.26■■□□□ 1.15
TUBD1-203ENST00000346141 THOC2Q8NI27 1593 aaKnown RBP22.21■■□□□ 1.15
TUBD1-203ENST00000346141 TOP2AP11388 1531 aaKnown RBP22.17■■□□□ 1.14
TUBD1-203ENST00000346141 KIF21AQ7Z4S6 1674 aa22.17■■□□□ 1.14
TUBD1-203ENST00000346141 DNAJC5Q9H3Z4 198 aa22.15■■□□□ 1.14
TUBD1-203ENST00000346141 CFTRP13569 1480 aa22.05■■□□□ 1.12
TUBD1-203ENST00000346141 MRC2Q9UBG0 1479 aa22.05■■□□□ 1.12
TUBD1-203ENST00000346141 CEP164Q9UPV0 1460 aa22.01■■□□□ 1.11
TUBD1-203ENST00000346141 FANCD2Q9BXW9 1451 aa21.99■■□□□ 1.11
TUBD1-203ENST00000346141 WDR62O43379 1518 aa21.98■■□□□ 1.11
TUBD1-203ENST00000346141 CCDC88BA6NC98 1476 aa21.9■■□□□ 1.1
TUBD1-203ENST00000346141 PRDM2Q13029 1718 aa21.81■■□□□ 1.08
TUBD1-203ENST00000346141 URB2Q14146 1524 aaKnown RBP21.78■■□□□ 1.08
TUBD1-203ENST00000346141 ABCC8Q09428 1581 aa21.61■■□□□ 1.05
TUBD1-203ENST00000346141 TOPBP1Q92547 1522 aa21.59■■□□□ 1.05
TUBD1-203ENST00000346141 PPP6R1Q9UPN7 881 aa21.58■■□□□ 1.04
TUBD1-203ENST00000346141 IFT140Q96RY7 1462 aa21.57■■□□□ 1.04
TUBD1-203ENST00000346141 ADRA2BP18089 450 aa21.55■■□□□ 1.04
TUBD1-203ENST00000346141 DNMBPQ6XZF7 1577 aa21.55■■□□□ 1.04
TUBD1-203ENST00000346141 ZNF608Q9ULD9 1512 aaPredicted RBP21.46■■□□□ 1.03
TUBD1-203ENST00000346141 SUPT5HO00267 1087 aaKnown RBP21.45■■□□□ 1.03
TUBD1-203ENST00000346141 OSCARQ8IYS5 282 aa21.45■■□□□ 1.02
TUBD1-203ENST00000346141 POLA1P09884 1462 aaPredicted RBP21.39■■□□□ 1.02
TUBD1-203ENST00000346141 TARBP1Q13395 1621 aaKnown RBP21.38■■□□□ 1.01
TUBD1-203ENST00000346141 EIF4G3O43432 1585 aaKnown RBP21.37■■□□□ 1.01
TUBD1-203ENST00000346141 AQRO60306 1485 aaKnown RBP eCLIP21.31■■□□□ 1
TUBD1-203ENST00000346141 SOGA1O94964 1423 aa21.3■■□□□ 1
TUBD1-203ENST00000346141 CUX1P39880 1505 aa21.29■■□□□ 1
TUBD1-203ENST00000346141 FGD5Q6ZNL6 1462 aa21.29■■□□□ 1
TUBD1-203ENST00000346141 RAD54L2Q9Y4B4 1467 aa21.29■■□□□ 1
TUBD1-203ENST00000346141 PIAS4Q8N2W9 510 aaPredicted RBP21.26■□□□□ 0.99
TUBD1-203ENST00000346141 TRIM41Q8WV44 630 aa21.24■□□□□ 0.99
TUBD1-203ENST00000346141 WDR97A6NE52 1622 aa21.23■□□□□ 0.99
TUBD1-203ENST00000346141 TDRD9Q8NDG6 1382 aaKnown RBP21.22■□□□□ 0.99
TUBD1-203ENST00000346141 CHD1O14646 1710 aa21.14■□□□□ 0.97
TUBD1-203ENST00000346141 FBLN2P98095 1184 aa21.13■□□□□ 0.97
TUBD1-203ENST00000346141 GRIN2BQ13224 1484 aa21.11■□□□□ 0.97
TUBD1-203ENST00000346141 SNAPC4Q5SXM2 1469 aa21.11■□□□□ 0.97
TUBD1-203ENST00000346141 RIMBP3CA6NJZ7 1639 aa21.1■□□□□ 0.97
TUBD1-203ENST00000346141 RIMBP3BA6NNM3 1639 aa21.1■□□□□ 0.97
TUBD1-203ENST00000346141 RIMBP3Q9UFD9 1639 aa21.1■□□□□ 0.97
TUBD1-203ENST00000346141 MAGI1Q96QZ7 1491 aaPredicted RBP21.09■□□□□ 0.97
TUBD1-203ENST00000346141 ARHGEF11O15085 1522 aa21.08■□□□□ 0.97
TUBD1-203ENST00000346141 ABCA10Q8WWZ4 1543 aa21.08■□□□□ 0.97
TUBD1-203ENST00000346141 WRNQ14191 1432 aaPredicted RBP eCLIP21.05■□□□□ 0.96
TUBD1-203ENST00000346141 GAPVD1Q14C86 1478 aa21.05■□□□□ 0.96
TUBD1-203ENST00000346141 CHMP7Q8WUX9 453 aaPredicted RBP21.03■□□□□ 0.96
TUBD1-203ENST00000346141 TOP2BQ02880 1626 aa21.03■□□□□ 0.96
TUBD1-203ENST00000346141 BIVM-ERCC5R4GMW8 1640 aa21.02■□□□□ 0.96
TUBD1-203ENST00000346141 SYNJ2O15056 1496 aa21.01■□□□□ 0.95
TUBD1-203ENST00000346141 ABCA5Q8WWZ7 1642 aa21■□□□□ 0.95
TUBD1-203ENST00000346141 PBRM1Q86U86 1689 aa20.99■□□□□ 0.95
TUBD1-203ENST00000346141 SYNJ1O43426 1573 aa20.99■□□□□ 0.95
TUBD1-203ENST00000346141 CLASP1Q7Z460 1538 aa20.94■□□□□ 0.94
TUBD1-203ENST00000346141 MSH5O43196 834 aa20.9■□□□□ 0.94
TUBD1-203ENST00000346141 CYB5RLQ6IPT4 315 aa20.9■□□□□ 0.94
TUBD1-203ENST00000346141 ARAP1Q96P48 1450 aa20.88■□□□□ 0.93
TUBD1-203ENST00000346141 ADAMTS12P58397 1594 aa20.84■□□□□ 0.93
TUBD1-203ENST00000346141 GRIN2AQ12879 1464 aa20.82■□□□□ 0.92
TUBD1-203ENST00000346141 ERICH3Q5RHP9 1530 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms